RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 TSTA3Q13630 321 aaPredicted RBP13.76□□□□□ -0.21
SIN3A-202ENST00000394947 CAPN12Q6ZSI9 719 aa13.76□□□□□ -0.21
SIN3A-202ENST00000394947 LMBR1Q8WVP7 490 aa13.76□□□□□ -0.21
SIN3A-202ENST00000394947 SPATA17Q96L03 361 aa13.76□□□□□ -0.21
SIN3A-202ENST00000394947 GDAP1L1Q96MZ0 367 aa13.76□□□□□ -0.21
SIN3A-202ENST00000394947 NKIRAS1Q9NYS0 192 aa13.76□□□□□ -0.21
SIN3A-202ENST00000394947 MAGEB6P1A0A0J9YX57 407 aa13.75□□□□□ -0.21
SIN3A-202ENST00000394947 VWA3AA6NCI4 1184 aa13.75□□□□□ -0.21
SIN3A-202ENST00000394947 TRIM27P14373 513 aa13.75□□□□□ -0.21
SIN3A-202ENST00000394947 USP37Q86T82 979 aa13.75□□□□□ -0.21
SIN3A-202ENST00000394947 RAPGEF3O95398 923 aa13.75□□□□□ -0.21
SIN3A-202ENST00000394947 CLUL1Q15846 466 aa13.75□□□□□ -0.21
SIN3A-202ENST00000394947 NAA16Q6N069 864 aaPredicted RBP13.75□□□□□ -0.21
SIN3A-202ENST00000394947 CXorf38Q8TB03 319 aa13.75□□□□□ -0.21
SIN3A-202ENST00000394947 PRPF31Q8WWY3 499 aaKnown RBP13.75□□□□□ -0.21
SIN3A-202ENST00000394947 MTRF1LQ9UGC7 380 aaKnown RBP13.75□□□□□ -0.21
SIN3A-202ENST00000394947 RBM8AQ9Y5S9 174 aaKnown RBP13.75□□□□□ -0.21
SIN3A-202ENST00000394947 ABL1P00519 1130 aa13.75□□□□□ -0.21
SIN3A-202ENST00000394947 ATP6V1AP38606 617 aa13.75□□□□□ -0.21
SIN3A-202ENST00000394947 MRPS27Q92552 414 aaKnown RBP13.75□□□□□ -0.21
SIN3A-202ENST00000394947 RRP36Q96EU6 259 aaKnown RBP13.75□□□□□ -0.21
SIN3A-202ENST00000394947 PRIM1P49642 420 aaKnown RBP13.75□□□□□ -0.21
SIN3A-202ENST00000394947 CALCOCO2Q13137 446 aa13.75□□□□□ -0.21
SIN3A-202ENST00000394947 SPDYE16A6NNV3 312 aaPredicted RBP13.75□□□□□ -0.21
SIN3A-202ENST00000394947 PRPHP41219 470 aa13.75□□□□□ -0.21
SIN3A-202ENST00000394947 SPDYE2Q495Y8 402 aa13.75□□□□□ -0.21
SIN3A-202ENST00000394947 FCHSD1Q86WN1 690 aa13.75□□□□□ -0.21
SIN3A-202ENST00000394947 KLHL7Q8IXQ5 586 aa13.75□□□□□ -0.21
SIN3A-202ENST00000394947 SMIM24O75264 130 aa13.75□□□□□ -0.21
SIN3A-202ENST00000394947 ALDH3A1P30838 453 aa13.75□□□□□ -0.21
SIN3A-202ENST00000394947 HINFPQ9BQA5 517 aa13.75□□□□□ -0.21
SIN3A-202ENST00000394947 LDHCP07864 332 aa13.74□□□□□ -0.21
SIN3A-202ENST00000394947 SLC9C2Q5TAH2 1124 aa13.74□□□□□ -0.21
SIN3A-202ENST00000394947 MRPL46Q9H2W6 279 aaKnown RBP13.74□□□□□ -0.21
SIN3A-202ENST00000394947 CHPF2Q9P2E5 772 aa13.74□□□□□ -0.21
SIN3A-202ENST00000394947 MYO1AQ9UBC5 1043 aa13.74□□□□□ -0.21
SIN3A-202ENST00000394947 SAT1P21673 171 aa13.74□□□□□ -0.21
SIN3A-202ENST00000394947 NXNQ6DKJ4 435 aa13.74□□□□□ -0.21
SIN3A-202ENST00000394947 C17orf53Q8N3J3 647 aaPredicted RBP13.74□□□□□ -0.21
SIN3A-202ENST00000394947 FNBP1Q96RU3 617 aa13.74□□□□□ -0.21
SIN3A-202ENST00000394947 MCM9Q9NXL9 1143 aa13.74□□□□□ -0.21
SIN3A-202ENST00000394947 BICDL2A1A5D9 508 aa13.74□□□□□ -0.21
SIN3A-202ENST00000394947 KRT19P08727 400 aa13.74□□□□□ -0.21
SIN3A-202ENST00000394947 KRT83P78385 493 aa13.74□□□□□ -0.21
SIN3A-202ENST00000394947 GSTO1P78417 241 aa13.74□□□□□ -0.21
SIN3A-202ENST00000394947 LETM2Q2VYF4 491 aa13.74□□□□□ -0.21
SIN3A-202ENST00000394947 TTC22Q5TAA0 569 aa13.74□□□□□ -0.21
SIN3A-202ENST00000394947 FYB2Q5VWT5 728 aa13.74□□□□□ -0.21
SIN3A-202ENST00000394947 MYCLP12524 364 aaPredicted RBP13.73□□□□□ -0.21
SIN3A-202ENST00000394947 PPP2R3AQ06190 1150 aa13.73□□□□□ -0.21
SIN3A-202ENST00000394947 PPP2R5AQ15172 486 aa13.73□□□□□ -0.21
SIN3A-202ENST00000394947 KIAA1524Q8TCG1 905 aa13.73□□□□□ -0.21
SIN3A-202ENST00000394947 MCUR1Q96AQ8 359 aa13.73□□□□□ -0.21
SIN3A-202ENST00000394947 RILPQ96NA2 401 aa13.73□□□□□ -0.21
SIN3A-202ENST00000394947 KRT23Q9C075 422 aa13.73□□□□□ -0.21
SIN3A-202ENST00000394947 ZNF853P0CG23 659 aa13.73□□□□□ -0.21
SIN3A-202ENST00000394947 GBP1P32455 592 aa13.73□□□□□ -0.21
SIN3A-202ENST00000394947 SESN3P58005 492 aa13.73□□□□□ -0.21
SIN3A-202ENST00000394947 PDCD7Q8N8D1 485 aaKnown RBP13.73□□□□□ -0.21
SIN3A-202ENST00000394947 NOD1Q9Y239 953 aa13.73□□□□□ -0.21
SIN3A-202ENST00000394947 CCDC152Q4G0S7 254 aa13.73□□□□□ -0.21
SIN3A-202ENST00000394947 FGD6Q6ZV73 1430 aa13.73□□□□□ -0.21
SIN3A-202ENST00000394947 A0A1B0GVL5 298 aa13.73□□□□□ -0.21
SIN3A-202ENST00000394947 NMIQ13287 307 aaPredicted RBP13.73□□□□□ -0.21
SIN3A-202ENST00000394947 KRT79Q5XKE5 535 aa13.73□□□□□ -0.21
SIN3A-202ENST00000394947 OGFOD1Q8N543 542 aa13.73□□□□□ -0.21
SIN3A-202ENST00000394947 USH1CQ9Y6N9 552 aa13.73□□□□□ -0.21
SIN3A-202ENST00000394947 CCNT1O60563 726 aaKnown RBP13.73□□□□□ -0.21
SIN3A-202ENST00000394947 MX2P20592 715 aa13.73□□□□□ -0.21
SIN3A-202ENST00000394947 CASP2P42575 452 aa13.73□□□□□ -0.21
SIN3A-202ENST00000394947 ANKRD42Q8N9B4 389 aa13.73□□□□□ -0.21
SIN3A-202ENST00000394947 ESR2Q92731 530 aa13.73□□□□□ -0.21
SIN3A-202ENST00000394947 SDSP20132 328 aa13.72□□□□□ -0.21
SIN3A-202ENST00000394947 TYRO3Q06418 890 aa13.72□□□□□ -0.21
SIN3A-202ENST00000394947 LRMPQ12912 555 aa13.72□□□□□ -0.21
SIN3A-202ENST00000394947 SETDB2Q96T68 719 aa13.72□□□□□ -0.21
SIN3A-202ENST00000394947 PYM1Q9BRP8 204 aaKnown RBP13.72□□□□□ -0.21
SIN3A-202ENST00000394947 VCX3BQ9H321 246 aa13.72□□□□□ -0.21
SIN3A-202ENST00000394947 SWAP70Q9UH65 585 aa13.72□□□□□ -0.21
SIN3A-202ENST00000394947 HDAC9Q9UKV0 1011 aa13.72□□□□□ -0.21
SIN3A-202ENST00000394947 GIPC1O14908 333 aa13.72□□□□□ -0.21
SIN3A-202ENST00000394947 DBF4Q9UBU7 674 aaPredicted RBP13.72□□□□□ -0.21
SIN3A-202ENST00000394947 MAGED2Q9UNF1 606 aaPredicted RBP13.72□□□□□ -0.21
SIN3A-202ENST00000394947 TRAF5O00463 557 aa13.72□□□□□ -0.21
SIN3A-202ENST00000394947 WDR46O15213 610 aaKnown RBP13.72□□□□□ -0.21
SIN3A-202ENST00000394947 CPA1P15085 419 aa13.72□□□□□ -0.21
SIN3A-202ENST00000394947 VAV2P52735 878 aa13.72□□□□□ -0.21
SIN3A-202ENST00000394947 PNMA8AQ86V59 439 aaPredicted RBP13.72□□□□□ -0.21
SIN3A-202ENST00000394947 PRIMPOLQ96LW4 560 aa13.72□□□□□ -0.21
SIN3A-202ENST00000394947 ZSCAN16Q9H4T2 348 aaPredicted RBP13.72□□□□□ -0.21
SIN3A-202ENST00000394947 KMT5BQ4FZB7 885 aa13.72□□□□□ -0.21
SIN3A-202ENST00000394947 WDR44Q5JSH3 913 aa13.72□□□□□ -0.21
SIN3A-202ENST00000394947 CHMP6Q96FZ7 201 aa13.72□□□□□ -0.21
SIN3A-202ENST00000394947 TBC1D8O95759 1140 aa13.72□□□□□ -0.21
SIN3A-202ENST00000394947 TNFAIP3P21580 790 aa13.72□□□□□ -0.21
SIN3A-202ENST00000394947 CCDC89Q8N998 374 aa13.72□□□□□ -0.21
SIN3A-202ENST00000394947 SEPT10Q9P0V9 454 aa13.72□□□□□ -0.21
SIN3A-202ENST00000394947 CACNA2D3Q8IZS8 1091 aa13.71□□□□□ -0.21
SIN3A-202ENST00000394947 AFAP1L1Q8TED9 768 aa13.71□□□□□ -0.21
SIN3A-202ENST00000394947 NOC4LQ9BVI4 516 aaKnown RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 154.6 ms