RNA–Protein interactions for RNA: ENST00000394547.7

TRPT1-203, Transcript of tRNA phosphotransferase 1, humanhuman

TSL 1 (best) BASIC

Gene TRPT1, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-203ENST00000394547 GGA3Q9NZ52 723 aa23.32■■□□□ 1.32
TRPT1-203ENST00000394547 SPDYE2BA6NHP3 402 aa23.31■■□□□ 1.32
TRPT1-203ENST00000394547 IGSF3O75054 1194 aa23.31■■□□□ 1.32
TRPT1-203ENST00000394547 SPDYE6P0CI01 402 aa23.31■■□□□ 1.32
TRPT1-203ENST00000394547 SPTY2D1Q68D10 685 aaPredicted RBP23.31■■□□□ 1.32
TRPT1-203ENST00000394547 GCC1Q96CN9 775 aa23.31■■□□□ 1.32
TRPT1-203ENST00000394547 LDHBP07195 334 aaKnown RBP23.3■■□□□ 1.32
TRPT1-203ENST00000394547 CRKP46108 304 aa23.3■■□□□ 1.32
TRPT1-203ENST00000394547 GRIK5Q16478 980 aa23.3■■□□□ 1.32
TRPT1-203ENST00000394547 NBPF9Q3BBW0 867 aa23.3■■□□□ 1.32
TRPT1-203ENST00000394547 TEKT1Q969V4 418 aa23.3■■□□□ 1.32
TRPT1-203ENST00000394547 TRPM7Q96QT4 1865 aa23.3■■□□□ 1.32
TRPT1-203ENST00000394547 MAST2Q6P0Q8 1798 aa23.29■■□□□ 1.32
TRPT1-203ENST00000394547 MYO1BO43795 1136 aa23.29■■□□□ 1.32
TRPT1-203ENST00000394547 PRDX5P30044 214 aa23.29■■□□□ 1.32
TRPT1-203ENST00000394547 ANGEL2Q5VTE6 544 aaKnown RBP23.29■■□□□ 1.32
TRPT1-203ENST00000394547 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.29■■□□□ 1.32
TRPT1-203ENST00000394547 RWDD1Q9H446 243 aaPredicted RBP23.29■■□□□ 1.32
TRPT1-203ENST00000394547 APLP1P51693 650 aa23.28■■□□□ 1.32
TRPT1-203ENST00000394547 RBM5P52756 815 aaKnown RBP eCLIP23.28■■□□□ 1.32
TRPT1-203ENST00000394547 HHIPL2Q6UWX4 724 aa23.28■■□□□ 1.32
TRPT1-203ENST00000394547 SULF1Q8IWU6 871 aa23.28■■□□□ 1.32
TRPT1-203ENST00000394547 POLR2AP24928 1970 aaKnown RBP23.27■■□□□ 1.32
TRPT1-203ENST00000394547 PI16Q6UXB8 463 aa23.27■■□□□ 1.32
TRPT1-203ENST00000394547 KRT26Q7Z3Y9 468 aa23.27■■□□□ 1.32
TRPT1-203ENST00000394547 APOBEC3FQ8IUX4 373 aaKnown RBP23.27■■□□□ 1.32
TRPT1-203ENST00000394547 ZDHHC15Q96MV8 337 aa23.27■■□□□ 1.32
TRPT1-203ENST00000394547 GLIS2Q9BZE0 524 aaPredicted RBP23.27■■□□□ 1.32
TRPT1-203ENST00000394547 ABCF2Q9UG63 623 aa23.27■■□□□ 1.32
TRPT1-203ENST00000394547 ASTN2O75129 1339 aaPredicted RBP23.27■■□□□ 1.32
TRPT1-203ENST00000394547 ERICH6Q7L0X2 663 aa23.26■■□□□ 1.31
TRPT1-203ENST00000394547 SLF2Q8IX21 1173 aa23.26■■□□□ 1.31
TRPT1-203ENST00000394547 PRMT6Q96LA8 375 aaPredicted RBP23.26■■□□□ 1.31
TRPT1-203ENST00000394547 DOCK2Q92608 1830 aa23.25■■□□□ 1.31
TRPT1-203ENST00000394547 IRX6P78412 446 aaPredicted RBP23.25■■□□□ 1.31
TRPT1-203ENST00000394547 DZIP1Q86YF9 867 aaKnown RBP23.25■■□□□ 1.31
TRPT1-203ENST00000394547 MYH2Q9UKX2 1941 aa23.24■■□□□ 1.31
TRPT1-203ENST00000394547 SMARCA5O60264 1052 aaPredicted RBP23.24■■□□□ 1.31
TRPT1-203ENST00000394547 USP48Q86UV5 1035 aa23.24■■□□□ 1.31
TRPT1-203ENST00000394547 PCDHAC2Q9Y5I4 1007 aa23.24■■□□□ 1.31
TRPT1-203ENST00000394547 CYP2E1P05181 493 aaPredicted RBP23.23■■□□□ 1.31
TRPT1-203ENST00000394547 CENPBP07199 599 aaPredicted RBP23.23■■□□□ 1.31
TRPT1-203ENST00000394547 ZAP70P43403 619 aa23.23■■□□□ 1.31
TRPT1-203ENST00000394547 SPDYE2Q495Y8 402 aa23.23■■□□□ 1.31
TRPT1-203ENST00000394547 FAM163AQ96GL9 167 aaPredicted RBP23.23■■□□□ 1.31
TRPT1-203ENST00000394547 SNRKQ9NRH2 765 aa23.23■■□□□ 1.31
TRPT1-203ENST00000394547 CREBZFQ9NS37 354 aa23.23■■□□□ 1.31
TRPT1-203ENST00000394547 PPP2R3BQ9Y5P8 575 aa23.23■■□□□ 1.31
TRPT1-203ENST00000394547 GAKO14976 1311 aa23.23■■□□□ 1.31
TRPT1-203ENST00000394547 ADM5C9JUS6 153 aa23.22■■□□□ 1.31
TRPT1-203ENST00000394547 ATP5JP18859 108 aa23.22■■□□□ 1.31
TRPT1-203ENST00000394547 GSTO1P78417 241 aa23.22■■□□□ 1.31
TRPT1-203ENST00000394547 TMED8Q6PL24 325 aaPredicted RBP23.22■■□□□ 1.31
TRPT1-203ENST00000394547 SMC5Q8IY18 1101 aa23.22■■□□□ 1.31
TRPT1-203ENST00000394547 GPATCH3Q96I76 525 aa23.22■■□□□ 1.31
TRPT1-203ENST00000394547 LRP2BPQ9P2M1 347 aa23.22■■□□□ 1.31
TRPT1-203ENST00000394547 ZBTB47Q9UFB7 747 aaPredicted RBP23.22■■□□□ 1.31
TRPT1-203ENST00000394547 TMEM88BA6NKF7 163 aa23.21■■□□□ 1.31
TRPT1-203ENST00000394547 TRAF5O00463 557 aa23.21■■□□□ 1.31
TRPT1-203ENST00000394547 MECOMQ03112 1051 aa23.21■■□□□ 1.31
TRPT1-203ENST00000394547 TNFAIP1Q13829 316 aa23.21■■□□□ 1.31
TRPT1-203ENST00000394547 TTF1Q15361 905 aaPredicted RBP23.21■■□□□ 1.31
TRPT1-203ENST00000394547 DIXDC1Q155Q3 683 aa23.21■■□□□ 1.31
TRPT1-203ENST00000394547 APOBEC3HQ6NTF7 200 aaKnown RBP23.21■■□□□ 1.31
TRPT1-203ENST00000394547 TBC1D9Q6ZT07 1266 aa23.21■■□□□ 1.31
TRPT1-203ENST00000394547 NSUN4Q96CB9 384 aaKnown RBP23.21■■□□□ 1.31
TRPT1-203ENST00000394547 ZNF70Q9UC06 446 aaPredicted RBP23.21■■□□□ 1.31
TRPT1-203ENST00000394547 DAGLAQ9Y4D2 1042 aa23.21■■□□□ 1.31
TRPT1-203ENST00000394547 MROH7-TTC4A0A0A0MT08 1334 aa23.2■■□□□ 1.3
TRPT1-203ENST00000394547 HOXD11P31277 338 aaPredicted RBP23.2■■□□□ 1.3
TRPT1-203ENST00000394547 TDRD3Q9H7E2 651 aaKnown RBP23.2■■□□□ 1.3
TRPT1-203ENST00000394547 RAI14Q9P0K7 980 aa23.2■■□□□ 1.3
TRPT1-203ENST00000394547 TTC41PQ6P2S7 1318 aa23.19■■□□□ 1.3
TRPT1-203ENST00000394547 CLRN2A0PK11 232 aa23.19■■□□□ 1.3
TRPT1-203ENST00000394547 IGHDP01880 384 aa23.19■■□□□ 1.3
TRPT1-203ENST00000394547 LDHCP07864 332 aa23.19■■□□□ 1.3
TRPT1-203ENST00000394547 BCL11AQ9H165 835 aa23.19■■□□□ 1.3
TRPT1-203ENST00000394547 VEZTQ9HBM0 779 aa23.19■■□□□ 1.3
TRPT1-203ENST00000394547 ECHDC1Q9NTX5 307 aa23.19■■□□□ 1.3
TRPT1-203ENST00000394547 TMOD2Q9NZR1 351 aa23.19■■□□□ 1.3
TRPT1-203ENST00000394547 MYO5AQ9Y4I1 1855 aaKnown RBP23.19■■□□□ 1.3
TRPT1-203ENST00000394547 AOX1Q06278 1338 aa23.18■■□□□ 1.3
TRPT1-203ENST00000394547 CELF2O95319 508 aaKnown RBP23.18■■□□□ 1.3
TRPT1-203ENST00000394547 ANKRD45Q5TZF3 282 aa23.18■■□□□ 1.3
TRPT1-203ENST00000394547 FKBP1CQ5VVH2 108 aa23.18■■□□□ 1.3
TRPT1-203ENST00000394547 CDCA5Q96FF9 252 aa23.18■■□□□ 1.3
TRPT1-203ENST00000394547 TNNI2P48788 182 aa23.17■■□□□ 1.3
TRPT1-203ENST00000394547 FMR1Q06787 632 aaKnown RBP eCLIP23.17■■□□□ 1.3
TRPT1-203ENST00000394547 CST9Q5W186 159 aa23.17■■□□□ 1.3
TRPT1-203ENST00000394547 ZNF384Q8TF68 577 aa23.17■■□□□ 1.3
TRPT1-203ENST00000394547 HAUS7Q99871 368 aa23.17■■□□□ 1.3
TRPT1-203ENST00000394547 DEFB129Q9H1M3 183 aa23.17■■□□□ 1.3
TRPT1-203ENST00000394547 PIH1D3Q9NQM4 214 aaKnown RBP23.17■■□□□ 1.3
TRPT1-203ENST00000394547 MAP4K4O95819 1239 aaPredicted RBP23.16■■□□□ 1.3
TRPT1-203ENST00000394547 RNF216Q9NWF9 866 aaPredicted RBP23.16■■□□□ 1.3
TRPT1-203ENST00000394547 SALL3Q9BXA9 1300 aa23.15■■□□□ 1.3
TRPT1-203ENST00000394547 PAPPA2Q9BXP8 1791 aa23.15■■□□□ 1.3
TRPT1-203ENST00000394547 GPR75-ASB3A0A0A6YYF3 556 aa23.15■■□□□ 1.3
TRPT1-203ENST00000394547 MAP3K12Q12852 859 aa23.15■■□□□ 1.3
TRPT1-203ENST00000394547 NAA16Q6N069 864 aaPredicted RBP23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms