RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 R3HDMLQ9H3Y0 253 aa21.99■■□□□ 1.11
SNRPA1-202ENST00000394082 CRKP46108 304 aa21.98■■□□□ 1.11
SNRPA1-202ENST00000394082 OTUD7BQ6GQQ9 843 aa21.98■■□□□ 1.11
SNRPA1-202ENST00000394082 TEPSINQ96N21 525 aa21.98■■□□□ 1.11
SNRPA1-202ENST00000394082 USP44Q9H0E7 712 aa21.98■■□□□ 1.11
SNRPA1-202ENST00000394082 TDRD3Q9H7E2 651 aaKnown RBP21.98■■□□□ 1.11
SNRPA1-202ENST00000394082 SUGT1Q9Y2Z0 365 aa21.98■■□□□ 1.11
SNRPA1-202ENST00000394082 HTTP42858 3142 aa21.97■■□□□ 1.11
SNRPA1-202ENST00000394082 TNNI2P48788 182 aa21.97■■□□□ 1.11
SNRPA1-202ENST00000394082 ALDH1L2Q3SY69 923 aa21.97■■□□□ 1.11
SNRPA1-202ENST00000394082 LRRC24Q50LG9 513 aa21.97■■□□□ 1.11
SNRPA1-202ENST00000394082 METTL24Q5JXM2 366 aa21.97■■□□□ 1.11
SNRPA1-202ENST00000394082 PDE4DIPQ5VU43 2346 aa21.96■■□□□ 1.11
SNRPA1-202ENST00000394082 IGF2BP3O00425 579 aaKnown RBP eCLIP21.96■■□□□ 1.11
SNRPA1-202ENST00000394082 SSH1Q8WYL5 1049 aa21.96■■□□□ 1.11
SNRPA1-202ENST00000394082 SLFN5Q08AF3 891 aa21.95■■□□□ 1.1
SNRPA1-202ENST00000394082 FGFR2P21802 821 aa21.94■■□□□ 1.1
SNRPA1-202ENST00000394082 GJA5P36382 358 aa21.94■■□□□ 1.1
SNRPA1-202ENST00000394082 PUM3Q15397 648 aaKnown RBP21.94■■□□□ 1.1
SNRPA1-202ENST00000394082 FKBP1CQ5VVH2 108 aa21.94■■□□□ 1.1
SNRPA1-202ENST00000394082 TEKT1Q969V4 418 aa21.94■■□□□ 1.1
SNRPA1-202ENST00000394082 ZDHHC15Q96MV8 337 aa21.94■■□□□ 1.1
SNRPA1-202ENST00000394082 MAST3O60307 1309 aa21.93■■□□□ 1.1
SNRPA1-202ENST00000394082 FRAT2O75474 233 aaPredicted RBP21.93■■□□□ 1.1
SNRPA1-202ENST00000394082 IFIT1P09914 478 aaKnown RBP21.93■■□□□ 1.1
SNRPA1-202ENST00000394082 FAM83AQ86UY5 434 aa21.93■■□□□ 1.1
SNRPA1-202ENST00000394082 FBXO3Q9UK99 471 aa21.93■■□□□ 1.1
SNRPA1-202ENST00000394082 OTOFQ9HC10 1997 aa21.92■■□□□ 1.1
SNRPA1-202ENST00000394082 GRIK5Q16478 980 aa21.92■■□□□ 1.1
SNRPA1-202ENST00000394082 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.92■■□□□ 1.1
SNRPA1-202ENST00000394082 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.92■■□□□ 1.1
SNRPA1-202ENST00000394082 OPTNQ96CV9 577 aa21.92■■□□□ 1.1
SNRPA1-202ENST00000394082 ERO1AQ96HE7 468 aa21.92■■□□□ 1.1
SNRPA1-202ENST00000394082 MS4A4AQ96JQ5 239 aa21.92■■□□□ 1.1
SNRPA1-202ENST00000394082 PTPN18Q99952 460 aa21.92■■□□□ 1.1
SNRPA1-202ENST00000394082 TCP10L2B9ZVM9 353 aa21.91■■□□□ 1.1
SNRPA1-202ENST00000394082 CT47B1P0C2W7 299 aaPredicted RBP21.91■■□□□ 1.1
SNRPA1-202ENST00000394082 RFX5P48382 616 aaPredicted RBP21.91■■□□□ 1.1
SNRPA1-202ENST00000394082 BCAMP50895 628 aa21.91■■□□□ 1.1
SNRPA1-202ENST00000394082 MAP3K9P80192 1104 aa21.91■■□□□ 1.1
SNRPA1-202ENST00000394082 HHIPL2Q6UWX4 724 aa21.91■■□□□ 1.1
SNRPA1-202ENST00000394082 OTOP1Q7RTM1 612 aa21.91■■□□□ 1.1
SNRPA1-202ENST00000394082 HOOK2Q96ED9 719 aa21.91■■□□□ 1.1
SNRPA1-202ENST00000394082 TMEM39BQ9GZU3 492 aa21.91■■□□□ 1.1
SNRPA1-202ENST00000394082 EYA2O00167 538 aa21.9■■□□□ 1.1
SNRPA1-202ENST00000394082 CHAF1AQ13111 956 aaPredicted RBP21.9■■□□□ 1.1
SNRPA1-202ENST00000394082 CRHR2Q13324 411 aa21.9■■□□□ 1.1
SNRPA1-202ENST00000394082 INTS3Q68E01 1043 aaKnown RBP21.9■■□□□ 1.1
SNRPA1-202ENST00000394082 TRMT2AQ8IZ69 625 aaKnown RBP21.9■■□□□ 1.1
SNRPA1-202ENST00000394082 LPIN2Q92539 896 aa21.9■■□□□ 1.1
SNRPA1-202ENST00000394082 IQSEC3Q9UPP2 1182 aaPredicted RBP21.9■■□□□ 1.1
SNRPA1-202ENST00000394082 TRIM17Q9Y577 477 aa21.9■■□□□ 1.1
SNRPA1-202ENST00000394082 CENPFP49454 3210 aa21.9■■□□□ 1.1
SNRPA1-202ENST00000394082 ZBTB22O15209 634 aa21.89■■□□□ 1.09
SNRPA1-202ENST00000394082 GTF2A2P52657 109 aa21.89■■□□□ 1.09
SNRPA1-202ENST00000394082 VGLL4Q14135 290 aa21.89■■□□□ 1.09
SNRPA1-202ENST00000394082 APOBEC3HQ6NTF7 200 aaKnown RBP21.89■■□□□ 1.09
SNRPA1-202ENST00000394082 KLHDC4Q8TBB5 520 aa21.89■■□□□ 1.09
SNRPA1-202ENST00000394082 WDR66Q8TBY9 1149 aa21.89■■□□□ 1.09
SNRPA1-202ENST00000394082 ELP3Q9H9T3 547 aa21.89■■□□□ 1.09
SNRPA1-202ENST00000394082 TMOD2Q9NZR1 351 aa21.89■■□□□ 1.09
SNRPA1-202ENST00000394082 CSADQ9Y600 493 aa21.89■■□□□ 1.09
SNRPA1-202ENST00000394082 RPAP1Q9BWH6 1393 aaPredicted RBP21.88■■□□□ 1.09
SNRPA1-202ENST00000394082 PRPF38BQ5VTL8 546 aaKnown RBP21.88■■□□□ 1.09
SNRPA1-202ENST00000394082 CDAN1Q8IWY9 1227 aa21.88■■□□□ 1.09
SNRPA1-202ENST00000394082 CIAO1O76071 339 aa21.87■■□□□ 1.09
SNRPA1-202ENST00000394082 SLC5A1P13866 664 aa21.87■■□□□ 1.09
SNRPA1-202ENST00000394082 SP3Q02447 781 aa21.87■■□□□ 1.09
SNRPA1-202ENST00000394082 ZCCHC17Q9NP64 241 aaKnown RBP21.87■■□□□ 1.09
SNRPA1-202ENST00000394082 HDAC5Q9UQL6 1122 aa21.87■■□□□ 1.09
SNRPA1-202ENST00000394082 SPDYE5A6NIY4 337 aa21.86■■□□□ 1.09
SNRPA1-202ENST00000394082 ATG9AQ7Z3C6 839 aa21.86■■□□□ 1.09
SNRPA1-202ENST00000394082 SMC4Q9NTJ3 1288 aa21.86■■□□□ 1.09
SNRPA1-202ENST00000394082 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.86■■□□□ 1.09
SNRPA1-202ENST00000394082 PTPN22Q9Y2R2 807 aa21.86■■□□□ 1.09
SNRPA1-202ENST00000394082 ARHGEF6Q15052 776 aa21.85■■□□□ 1.09
SNRPA1-202ENST00000394082 ERO1BQ86YB8 467 aa21.85■■□□□ 1.09
SNRPA1-202ENST00000394082 BRI3BPQ8WY22 251 aa21.85■■□□□ 1.09
SNRPA1-202ENST00000394082 UBTFL1P0CB47 393 aaPredicted RBP21.84■■□□□ 1.09
SNRPA1-202ENST00000394082 DCAF15Q66K64 600 aa21.84■■□□□ 1.09
SNRPA1-202ENST00000394082 EFCC1Q9HA90 598 aa21.84■■□□□ 1.09
SNRPA1-202ENST00000394082 ZFYVE28Q9HCC9 887 aa21.84■■□□□ 1.09
SNRPA1-202ENST00000394082 MKI67P46013 3256 aaKnown RBP21.84■■□□□ 1.09
SNRPA1-202ENST00000394082 CCL15-CCL14A0A0B4J2E2 113 aa21.83■■□□□ 1.09
SNRPA1-202ENST00000394082 CCL15Q16663 113 aa21.83■■□□□ 1.09
SNRPA1-202ENST00000394082 CD99L2Q8TCZ2 262 aa21.83■■□□□ 1.09
SNRPA1-202ENST00000394082 CNKSR2Q8WXI2 1034 aa21.83■■□□□ 1.09
SNRPA1-202ENST00000394082 ARMC5Q96C12 935 aa21.83■■□□□ 1.09
SNRPA1-202ENST00000394082 CDCA7LQ96GN5 454 aa21.83■■□□□ 1.09
SNRPA1-202ENST00000394082 SNCAIPQ9Y6H5 919 aa21.83■■□□□ 1.09
SNRPA1-202ENST00000394082 SALL1Q9NSC2 1324 aa21.82■■□□□ 1.08
SNRPA1-202ENST00000394082 SEMA3EO15041 775 aa21.82■■□□□ 1.08
SNRPA1-202ENST00000394082 WDHD1O75717 1129 aaPredicted RBP21.82■■□□□ 1.08
SNRPA1-202ENST00000394082 CETPP11597 493 aa21.82■■□□□ 1.08
SNRPA1-202ENST00000394082 CACNB3P54284 484 aa21.82■■□□□ 1.08
SNRPA1-202ENST00000394082 OTUD5Q96G74 571 aa21.82■■□□□ 1.08
SNRPA1-202ENST00000394082 WRNIP1Q96S55 665 aa21.82■■□□□ 1.08
SNRPA1-202ENST00000394082 API5Q9BZZ5 524 aaKnown RBP21.82■■□□□ 1.08
SNRPA1-202ENST00000394082 GNL3LQ9NVN8 582 aaKnown RBP21.82■■□□□ 1.08
SNRPA1-202ENST00000394082 MYH13Q9UKX3 1938 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms