RNA–Protein interactions for RNA: ENST00000393585.6

CASP3-202, Transcript of caspase 3, humanhuman

TSL 1 (best) BASIC

Gene CASP3, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-202ENST00000393585 SLC51AQ86UW1 340 aa12.97□□□□□ -0.33
CASP3-202ENST00000393585 NCOA5Q9HCD5 579 aaKnown RBP12.97□□□□□ -0.33
CASP3-202ENST00000393585 LRP2BPQ9P2M1 347 aa12.97□□□□□ -0.33
CASP3-202ENST00000393585 ABCF2Q9UG63 623 aa12.97□□□□□ -0.33
CASP3-202ENST00000393585 ZNF804BA4D1E1 1349 aa12.97□□□□□ -0.33
CASP3-202ENST00000393585 PFKFB2O60825 505 aa12.97□□□□□ -0.33
CASP3-202ENST00000393585 FAM173BQ6P4H8 233 aa12.97□□□□□ -0.33
CASP3-202ENST00000393585 TBC1D10CQ8IV04 446 aa12.97□□□□□ -0.33
CASP3-202ENST00000393585 MB21D2Q8IYB1 491 aaPredicted RBP12.97□□□□□ -0.33
CASP3-202ENST00000393585 NKX2-3Q8TAU0 364 aa12.97□□□□□ -0.33
CASP3-202ENST00000393585 GRPEL1Q9HAV7 217 aa12.97□□□□□ -0.33
CASP3-202ENST00000393585 COL1A1P02452 1464 aaPredicted RBP12.97□□□□□ -0.33
CASP3-202ENST00000393585 PRC1O43663 620 aa12.96□□□□□ -0.33
CASP3-202ENST00000393585 KRT27Q7Z3Y8 459 aa12.96□□□□□ -0.33
CASP3-202ENST00000393585 RALYLQ86SE5 291 aaKnown RBP12.96□□□□□ -0.33
CASP3-202ENST00000393585 VPS37DQ86XT2 251 aa12.96□□□□□ -0.33
CASP3-202ENST00000393585 MIGA1Q8NAN2 632 aa12.96□□□□□ -0.33
CASP3-202ENST00000393585 NCOA7Q8NI08 942 aa12.96□□□□□ -0.33
CASP3-202ENST00000393585 EPB41L4AQ9HCS5 686 aaPredicted RBP12.96□□□□□ -0.33
CASP3-202ENST00000393585 TNRC6CQ9HCJ0 1690 aaKnown RBP12.96□□□□□ -0.33
CASP3-202ENST00000393585 BRWD3Q6RI45 1802 aa12.96□□□□□ -0.33
CASP3-202ENST00000393585 PRKAB2O43741 272 aa12.96□□□□□ -0.33
CASP3-202ENST00000393585 PDCP20941 246 aa12.96□□□□□ -0.33
CASP3-202ENST00000393585 ANTXR2P58335 489 aa12.96□□□□□ -0.33
CASP3-202ENST00000393585 LCORLQ8N3X6 602 aa12.96□□□□□ -0.33
CASP3-202ENST00000393585 FAM84BQ96KN1 310 aaPredicted RBP12.96□□□□□ -0.33
CASP3-202ENST00000393585 ATP6V1DQ9Y5K8 247 aa12.96□□□□□ -0.33
CASP3-202ENST00000393585 CTDNEP1O95476 244 aa12.95□□□□□ -0.34
CASP3-202ENST00000393585 MBD3O95983 291 aa12.95□□□□□ -0.34
CASP3-202ENST00000393585 PDIA3P30101 505 aaKnown RBP12.95□□□□□ -0.34
CASP3-202ENST00000393585 TM4SF1P30408 202 aa12.95□□□□□ -0.34
CASP3-202ENST00000393585 MRE11P49959 708 aa12.95□□□□□ -0.34
CASP3-202ENST00000393585 FOSBP53539 338 aa12.95□□□□□ -0.34
CASP3-202ENST00000393585 CAVIN4Q5BKX8 364 aa12.95□□□□□ -0.34
CASP3-202ENST00000393585 RAB11FIP4Q86YS3 637 aa12.95□□□□□ -0.34
CASP3-202ENST00000393585 MCM5P33992 734 aa12.95□□□□□ -0.34
CASP3-202ENST00000393585 ADGRA1Q86SQ6 560 aa12.95□□□□□ -0.34
CASP3-202ENST00000393585 NSUN7Q8NE18 718 aaKnown RBP12.95□□□□□ -0.34
CASP3-202ENST00000393585 INCENPQ9NQS7 918 aa12.95□□□□□ -0.34
CASP3-202ENST00000393585 TFCP2L1Q9NZI6 479 aa12.95□□□□□ -0.34
CASP3-202ENST00000393585 CARMIL3Q8ND23 1372 aa12.95□□□□□ -0.34
CASP3-202ENST00000393585 IFNL3Q8IZI9 196 aa12.94□□□□□ -0.34
CASP3-202ENST00000393585 CNBD1Q8NA66 436 aa12.94□□□□□ -0.34
CASP3-202ENST00000393585 GNL3LQ9NVN8 582 aaKnown RBP12.94□□□□□ -0.34
CASP3-202ENST00000393585 PTPDC1A2A3K4 754 aa12.94□□□□□ -0.34
CASP3-202ENST00000393585 PATL2C9JE40 543 aaKnown RBP12.94□□□□□ -0.34
CASP3-202ENST00000393585 FAM184AQ8NB25 1140 aa12.94□□□□□ -0.34
CASP3-202ENST00000393585 TMEM87AQ8NBN3 555 aa12.94□□□□□ -0.34
CASP3-202ENST00000393585 SMARCC2Q8TAQ2 1214 aa12.94□□□□□ -0.34
CASP3-202ENST00000393585 NAPBQ9H115 298 aa12.94□□□□□ -0.34
CASP3-202ENST00000393585 RAI14Q9P0K7 980 aa12.94□□□□□ -0.34
CASP3-202ENST00000393585 UBR3Q6ZT12 1888 aa12.94□□□□□ -0.34
CASP3-202ENST00000393585 GSG1L2A8MUP6 293 aa12.93□□□□□ -0.34
CASP3-202ENST00000393585 CYP7A1P22680 504 aa12.93□□□□□ -0.34
CASP3-202ENST00000393585 ZNF445P59923 1031 aa12.93□□□□□ -0.34
CASP3-202ENST00000393585 CTDSPL2Q05D32 466 aa12.93□□□□□ -0.34
CASP3-202ENST00000393585 TRDNQ13061 729 aa12.93□□□□□ -0.34
CASP3-202ENST00000393585 ZNF274Q96GC6 653 aaPredicted RBP12.93□□□□□ -0.34
CASP3-202ENST00000393585 NEDD4P46934 1319 aa12.93□□□□□ -0.34
CASP3-202ENST00000393585 KLF18A0A0U1RQI7 1052 aa12.93□□□□□ -0.34
CASP3-202ENST00000393585 SYCE3A1L190 88 aa12.93□□□□□ -0.34
CASP3-202ENST00000393585 B4E1Z4 1266 aa12.93□□□□□ -0.34
CASP3-202ENST00000393585 GYS1P13807 737 aa12.93□□□□□ -0.34
CASP3-202ENST00000393585 CYB5R4Q7L1T6 521 aa12.93□□□□□ -0.34
CASP3-202ENST00000393585 ISY1Q9ULR0 285 aaKnown RBP12.93□□□□□ -0.34
CASP3-202ENST00000393585 SLC4A4Q9Y6R1 1079 aa12.93□□□□□ -0.34
CASP3-202ENST00000393585 PRR5LQ6MZQ0 368 aa12.92□□□□□ -0.34
CASP3-202ENST00000393585 TXNRD3Q86VQ6 643 aa12.92□□□□□ -0.34
CASP3-202ENST00000393585 STK11IPQ8N1F8 1099 aa12.92□□□□□ -0.34
CASP3-202ENST00000393585 FBXO33Q7Z6M2 555 aa12.92□□□□□ -0.34
CASP3-202ENST00000393585 FBXL16Q8N461 479 aa12.92□□□□□ -0.34
CASP3-202ENST00000393585 LLPHQ9BRT6 129 aaKnown RBP12.92□□□□□ -0.34
CASP3-202ENST00000393585 JAG2Q9Y219 1238 aa12.92□□□□□ -0.34
CASP3-202ENST00000393585 TACC3Q9Y6A5 838 aa12.92□□□□□ -0.34
CASP3-202ENST00000393585 GOLGA8BA8MQT2 603 aa12.92□□□□□ -0.34
CASP3-202ENST00000393585 H3BQV1 296 aa12.92□□□□□ -0.34
CASP3-202ENST00000393585 TDO2P48775 406 aa12.92□□□□□ -0.34
CASP3-202ENST00000393585 EVCP57679 992 aa12.92□□□□□ -0.34
CASP3-202ENST00000393585 ALX1Q15699 326 aa12.92□□□□□ -0.34
CASP3-202ENST00000393585 IFFO2Q5TF58 517 aa12.92□□□□□ -0.34
CASP3-202ENST00000393585 SDR42E1Q8WUS8 393 aa12.92□□□□□ -0.34
CASP3-202ENST00000393585 ANKRD2Q9GZV1 360 aa12.92□□□□□ -0.34
CASP3-202ENST00000393585 ANO8Q9HCE9 1232 aaPredicted RBP12.92□□□□□ -0.34
CASP3-202ENST00000393585 PDIA4P13667 645 aaKnown RBP12.91□□□□□ -0.34
CASP3-202ENST00000393585 CHAF1AQ13111 956 aaPredicted RBP12.91□□□□□ -0.34
CASP3-202ENST00000393585 SLC27A3Q5K4L6 730 aa12.91□□□□□ -0.34
CASP3-202ENST00000393585 ZNF384Q8TF68 577 aa12.91□□□□□ -0.34
CASP3-202ENST00000393585 PNPLA7Q6ZV29 1317 aa12.91□□□□□ -0.34
CASP3-202ENST00000393585 SALL1Q9NSC2 1324 aa12.91□□□□□ -0.34
CASP3-202ENST00000393585 HIBADHP31937 336 aaKnown RBP12.91□□□□□ -0.34
CASP3-202ENST00000393585 UBE2HP62256 183 aa12.91□□□□□ -0.34
CASP3-202ENST00000393585 KRT85P78386 507 aa12.91□□□□□ -0.34
CASP3-202ENST00000393585 HMGN5P82970 282 aaKnown RBP12.91□□□□□ -0.34
CASP3-202ENST00000393585 TTC6Q86TZ1 520 aa12.91□□□□□ -0.34
CASP3-202ENST00000393585 PROM2Q8N271 834 aa12.91□□□□□ -0.34
CASP3-202ENST00000393585 SENP2Q9HC62 589 aa12.91□□□□□ -0.34
CASP3-202ENST00000393585 TFIP11Q9UBB9 837 aaKnown RBP12.91□□□□□ -0.34
CASP3-202ENST00000393585 HPS5Q9UPZ3 1129 aa12.91□□□□□ -0.34
CASP3-202ENST00000393585 CACNA1SQ13698 1873 aa12.9□□□□□ -0.34
CASP3-202ENST00000393585 SERPINB2P05120 415 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms