RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 NUCB2P80303 420 aa17.76■□□□□ 0.43
MKS1-202ENST00000393119 EXOSC10Q01780 885 aaKnown RBP17.76■□□□□ 0.43
MKS1-202ENST00000393119 CTDSPL2Q05D32 466 aa17.76■□□□□ 0.43
MKS1-202ENST00000393119 A0A1B0GUL6 1792 aa17.76■□□□□ 0.43
MKS1-202ENST00000393119 KRT32Q14532 448 aa17.76■□□□□ 0.43
MKS1-202ENST00000393119 DHX32Q7L7V1 743 aaKnown RBP17.76■□□□□ 0.43
MKS1-202ENST00000393119 ANKRD2Q9GZV1 360 aa17.76■□□□□ 0.43
MKS1-202ENST00000393119 NAP1L2Q9ULW6 460 aaPredicted RBP17.76■□□□□ 0.43
MKS1-202ENST00000393119 GSG1L2A8MUP6 293 aa17.75■□□□□ 0.43
MKS1-202ENST00000393119 ZNF213O14771 459 aa17.75■□□□□ 0.43
MKS1-202ENST00000393119 JAK2O60674 1132 aa17.75■□□□□ 0.43
MKS1-202ENST00000393119 BRD1O95696 1058 aa17.75■□□□□ 0.43
MKS1-202ENST00000393119 IMMTQ16891 758 aaKnown RBP17.75■□□□□ 0.43
MKS1-202ENST00000393119 GNL3LQ9NVN8 582 aaKnown RBP17.75■□□□□ 0.43
MKS1-202ENST00000393119 SMC3Q9UQE7 1217 aa17.75■□□□□ 0.43
MKS1-202ENST00000393119 TRAK2O60296 914 aa17.75■□□□□ 0.43
MKS1-202ENST00000393119 CCT2P78371 535 aaKnown RBP17.75■□□□□ 0.43
MKS1-202ENST00000393119 FGD1P98174 961 aa17.75■□□□□ 0.43
MKS1-202ENST00000393119 IFNL3Q8IZI9 196 aa17.75■□□□□ 0.43
MKS1-202ENST00000393119 NCOA5Q9HCD5 579 aaKnown RBP17.75■□□□□ 0.43
MKS1-202ENST00000393119 SYT1P21579 422 aa17.74■□□□□ 0.43
MKS1-202ENST00000393119 ANTXR2P58335 489 aa17.74■□□□□ 0.43
MKS1-202ENST00000393119 TPRNQ4KMQ1 711 aa17.74■□□□□ 0.43
MKS1-202ENST00000393119 GDPD2Q9HCC8 539 aa17.74■□□□□ 0.43
MKS1-202ENST00000393119 POLLQ9UGP5 575 aa17.74■□□□□ 0.43
MKS1-202ENST00000393119 SLC4A4Q9Y6R1 1079 aa17.74■□□□□ 0.43
MKS1-202ENST00000393119 SRCAPQ6ZRS2 3230 aa17.74■□□□□ 0.43
MKS1-202ENST00000393119 SENP2Q9HC62 589 aa17.74■□□□□ 0.43
MKS1-202ENST00000393119 CYP2D7A0A087X1C5 515 aa17.73■□□□□ 0.43
MKS1-202ENST00000393119 UFL1O94874 794 aa17.73■□□□□ 0.43
MKS1-202ENST00000393119 MECOMQ03112 1051 aa17.73■□□□□ 0.43
MKS1-202ENST00000393119 SCRN1Q12765 414 aa17.73■□□□□ 0.43
MKS1-202ENST00000393119 SLC4A8Q2Y0W8 1093 aa17.73■□□□□ 0.43
MKS1-202ENST00000393119 CYB5R4Q7L1T6 521 aa17.73■□□□□ 0.43
MKS1-202ENST00000393119 RBM17Q96I25 401 aaKnown RBP17.73■□□□□ 0.43
MKS1-202ENST00000393119 CAMKK2Q96RR4 588 aa17.73■□□□□ 0.43
MKS1-202ENST00000393119 FOSBP53539 338 aa17.73■□□□□ 0.43
MKS1-202ENST00000393119 TICAM2Q86XR7 235 aa17.73■□□□□ 0.43
MKS1-202ENST00000393119 NLGN1Q8N2Q7 840 aa17.73■□□□□ 0.43
MKS1-202ENST00000393119 DDX11Q96FC9 970 aa17.73■□□□□ 0.43
MKS1-202ENST00000393119 GBP4Q96PP9 640 aa17.73■□□□□ 0.43
MKS1-202ENST00000393119 CTNNA3Q9UI47 895 aa17.73■□□□□ 0.43
MKS1-202ENST00000393119 NEDD4P46934 1319 aa17.72■□□□□ 0.43
MKS1-202ENST00000393119 MYH7P12883 1935 aa17.72■□□□□ 0.43
MKS1-202ENST00000393119 PATL2C9JE40 543 aaKnown RBP17.72■□□□□ 0.43
MKS1-202ENST00000393119 L1TD1Q5T7N2 865 aaKnown RBP17.72■□□□□ 0.43
MKS1-202ENST00000393119 ZSCAN31Q96LW9 406 aaPredicted RBP17.72■□□□□ 0.43
MKS1-202ENST00000393119 ZNF219Q9P2Y4 722 aaPredicted RBP17.72■□□□□ 0.43
MKS1-202ENST00000393119 B4E1Z4 1266 aa17.72■□□□□ 0.43
MKS1-202ENST00000393119 RIMBP2O15034 1052 aa17.72■□□□□ 0.43
MKS1-202ENST00000393119 MB21D2Q8IYB1 491 aaPredicted RBP17.72■□□□□ 0.43
MKS1-202ENST00000393119 NSUN4Q96CB9 384 aaKnown RBP17.72■□□□□ 0.43
MKS1-202ENST00000393119 SH2B1Q9NRF2 756 aaPredicted RBP17.72■□□□□ 0.43
MKS1-202ENST00000393119 XDHP47989 1333 aa17.71■□□□□ 0.43
MKS1-202ENST00000393119 FSD2A1L4K1 749 aa17.71■□□□□ 0.43
MKS1-202ENST00000393119 PRC1O43663 620 aa17.71■□□□□ 0.43
MKS1-202ENST00000393119 RIOK1Q9BRS2 568 aaKnown RBP17.71■□□□□ 0.43
MKS1-202ENST00000393119 ALDH8A1Q9H2A2 487 aaPredicted RBP17.71■□□□□ 0.43
MKS1-202ENST00000393119 AATFQ9NY61 560 aaKnown RBP eCLIP17.71■□□□□ 0.43
MKS1-202ENST00000393119 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.71■□□□□ 0.43
MKS1-202ENST00000393119 PRPF40AO75400 957 aaKnown RBP17.71■□□□□ 0.42
MKS1-202ENST00000393119 NAA16Q6N069 864 aaPredicted RBP17.71■□□□□ 0.42
MKS1-202ENST00000393119 NAPBQ9H115 298 aa17.71■□□□□ 0.42
MKS1-202ENST00000393119 SRGNP10124 158 aa17.7■□□□□ 0.42
MKS1-202ENST00000393119 RXRAP19793 462 aa17.7■□□□□ 0.42
MKS1-202ENST00000393119 ANKRD1Q15327 319 aa17.7■□□□□ 0.42
MKS1-202ENST00000393119 DIXDC1Q155Q3 683 aa17.7■□□□□ 0.42
MKS1-202ENST00000393119 LAMA4Q16363 1823 aa17.7■□□□□ 0.42
MKS1-202ENST00000393119 MAGEB6P1A0A0J9YX57 407 aa17.69■□□□□ 0.42
MKS1-202ENST00000393119 KLRG2A4D1S0 409 aaPredicted RBP17.69■□□□□ 0.42
MKS1-202ENST00000393119 C6orf229H3BNL8 230 aa17.69■□□□□ 0.42
MKS1-202ENST00000393119 STX6O43752 255 aa17.69■□□□□ 0.42
MKS1-202ENST00000393119 CTDNEP1O95476 244 aa17.69■□□□□ 0.42
MKS1-202ENST00000393119 SLC15A2Q16348 729 aa17.69■□□□□ 0.42
MKS1-202ENST00000393119 FAM173BQ6P4H8 233 aa17.69■□□□□ 0.42
MKS1-202ENST00000393119 FERMT3Q86UX7 667 aa17.69■□□□□ 0.42
MKS1-202ENST00000393119 TBC1D16Q8TBP0 767 aa17.69■□□□□ 0.42
MKS1-202ENST00000393119 GTF3C6Q969F1 213 aa17.69■□□□□ 0.42
MKS1-202ENST00000393119 PARP3Q9Y6F1 533 aa17.69■□□□□ 0.42
MKS1-202ENST00000393119 VPS37CA5D8V6 355 aaPredicted RBP17.69■□□□□ 0.42
MKS1-202ENST00000393119 MINDY4BA8MYZ0 360 aa17.69■□□□□ 0.42
MKS1-202ENST00000393119 CHRNA5P30532 468 aa17.69■□□□□ 0.42
MKS1-202ENST00000393119 HOXA10P31260 410 aaPredicted RBP17.69■□□□□ 0.42
MKS1-202ENST00000393119 TDO2P48775 406 aa17.69■□□□□ 0.42
MKS1-202ENST00000393119 RRP12Q5JTH9 1297 aaKnown RBP17.69■□□□□ 0.42
MKS1-202ENST00000393119 FBXO41Q8TF61 875 aa17.69■□□□□ 0.42
MKS1-202ENST00000393119 ZKSCAN3Q9BRR0 538 aa17.69■□□□□ 0.42
MKS1-202ENST00000393119 DOCK2Q92608 1830 aa17.68■□□□□ 0.42
MKS1-202ENST00000393119 ZNF622Q969S3 477 aaKnown RBP eCLIP17.68■□□□□ 0.428e-7■■■□□ 15.6
MKS1-202ENST00000393119 BRIP1Q9BX63 1249 aa17.68■□□□□ 0.42
MKS1-202ENST00000393119 GGA1Q9UJY5 639 aa17.68■□□□□ 0.42
MKS1-202ENST00000393119 TAOK2Q9UL54 1235 aa17.68■□□□□ 0.42
MKS1-202ENST00000393119 LEMD3Q9Y2U8 911 aa17.68■□□□□ 0.42
MKS1-202ENST00000393119 TNS1Q9HBL0 1735 aaKnown RBP17.68■□□□□ 0.42
MKS1-202ENST00000393119 PPEF1O14829 653 aaPredicted RBP17.68■□□□□ 0.42
MKS1-202ENST00000393119 PDIA3P30101 505 aaKnown RBP17.68■□□□□ 0.42
MKS1-202ENST00000393119 CLEC17AQ6ZS10 378 aa17.68■□□□□ 0.42
MKS1-202ENST00000393119 NCOA7Q8NI08 942 aa17.68■□□□□ 0.42
MKS1-202ENST00000393119 LMBRD1Q9NUN5 540 aa17.68■□□□□ 0.42
MKS1-202ENST00000393119 MTMR6Q9Y217 621 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms