RNA–Protein interactions for RNA: ENST00000392632.6

UBR3-202, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,129 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-202ENST00000392632 C1orf228Q6PIY5 440 aa4.47□□□□□ -1.69
UBR3-202ENST00000392632 IPO4Q8TEX9 1081 aaKnown RBP4.47□□□□□ -1.69
UBR3-202ENST00000392632 HAUS8Q9BT25 410 aa4.47□□□□□ -1.69
UBR3-202ENST00000392632 SNRKQ9NRH2 765 aa4.47□□□□□ -1.69
UBR3-202ENST00000392632 BCAP29Q9UHQ4 241 aa4.47□□□□□ -1.69
UBR3-202ENST00000392632 IGF1RP08069 1367 aa4.47□□□□□ -1.69
UBR3-202ENST00000392632 ARHGEF35A5YM69 484 aa4.47□□□□□ -1.69
UBR3-202ENST00000392632 IVLP07476 585 aa4.47□□□□□ -1.69
UBR3-202ENST00000392632 SEPT6Q14141 434 aa4.47□□□□□ -1.69
UBR3-202ENST00000392632 PSPC1Q8WXF1 523 aaKnown RBP4.47□□□□□ -1.69
UBR3-202ENST00000392632 CNKSR1Q969H4 720 aa4.47□□□□□ -1.69
UBR3-202ENST00000392632 ANKFY1Q9P2R3 1169 aa4.47□□□□□ -1.69
UBR3-202ENST00000392632 TNRQ92752 1358 aa4.47□□□□□ -1.69
UBR3-202ENST00000392632 KLF18A0A0U1RQI7 1052 aa4.47□□□□□ -1.69
UBR3-202ENST00000392632 PLCD1P51178 756 aa4.47□□□□□ -1.69
UBR3-202ENST00000392632 PPP2R5BQ15173 497 aa4.47□□□□□ -1.69
UBR3-202ENST00000392632 SEL1L2Q5TEA6 688 aa4.47□□□□□ -1.69
UBR3-202ENST00000392632 DTHD1Q6ZMT9 781 aa4.47□□□□□ -1.69
UBR3-202ENST00000392632 OTUD6AQ7L8S5 288 aa4.47□□□□□ -1.69
UBR3-202ENST00000392632 ZBTB33Q86T24 672 aa4.47□□□□□ -1.69
UBR3-202ENST00000392632 ZBTB8OSQ8IWT0 167 aa4.47□□□□□ -1.69
UBR3-202ENST00000392632 ACSBG1Q96GR2 724 aa4.47□□□□□ -1.69
UBR3-202ENST00000392632 TTC1Q99614 292 aa4.47□□□□□ -1.69
UBR3-202ENST00000392632 LZTS2Q9BRK4 669 aa4.47□□□□□ -1.69
UBR3-202ENST00000392632 AGTPBP1Q9UPW5 1226 aa4.47□□□□□ -1.69
UBR3-202ENST00000392632 SOS1Q07889 1333 aaPredicted RBP4.47□□□□□ -1.69
UBR3-202ENST00000392632 FANCIQ9NVI1 1328 aa4.47□□□□□ -1.69
UBR3-202ENST00000392632 MGEA5O60502 916 aa4.47□□□□□ -1.69
UBR3-202ENST00000392632 SARNPP82979 210 aaKnown RBP4.47□□□□□ -1.69
UBR3-202ENST00000392632 NUCB1Q02818 461 aa4.47□□□□□ -1.69
UBR3-202ENST00000392632 SETDB1Q15047 1291 aa4.47□□□□□ -1.69
UBR3-202ENST00000392632 CHRNA2Q15822 529 aa4.47□□□□□ -1.69
UBR3-202ENST00000392632 SLC9C2Q5TAH2 1124 aa4.47□□□□□ -1.69
UBR3-202ENST00000392632 SND1Q7KZF4 910 aaKnown RBP eCLIP4.47□□□□□ -1.69
UBR3-202ENST00000392632 IQUBQ8NA54 791 aa4.47□□□□□ -1.69
UBR3-202ENST00000392632 DCAF5Q96JK2 942 aa4.47□□□□□ -1.69
UBR3-202ENST00000392632 CCDC42Q96M95 316 aa4.47□□□□□ -1.69
UBR3-202ENST00000392632 ALG1Q9BT22 464 aa4.47□□□□□ -1.69
UBR3-202ENST00000392632 KIAA1107Q9UPP5 1409 aa4.47□□□□□ -1.69
UBR3-202ENST00000392632 AQRO60306 1485 aaKnown RBP eCLIP4.46□□□□□ -1.69
UBR3-202ENST00000392632 FGD5Q6ZNL6 1462 aa4.46□□□□□ -1.69
UBR3-202ENST00000392632 TEX14Q8IWB6 1497 aa4.46□□□□□ -1.69
UBR3-202ENST00000392632 RAD54L2Q9Y4B4 1467 aa4.46□□□□□ -1.69
UBR3-202ENST00000392632 UFL1O94874 794 aa4.46□□□□□ -1.69
UBR3-202ENST00000392632 YARSP54577 528 aaKnown RBP4.46□□□□□ -1.69
UBR3-202ENST00000392632 TNNC1P63316 161 aa4.46□□□□□ -1.69
UBR3-202ENST00000392632 SP4Q02446 784 aa4.46□□□□□ -1.69
UBR3-202ENST00000392632 ITIH3Q06033 890 aa4.46□□□□□ -1.69
UBR3-202ENST00000392632 AKAP4Q5JQC9 854 aa4.46□□□□□ -1.69
UBR3-202ENST00000392632 PRPF38AQ8NAV1 312 aaKnown RBP4.46□□□□□ -1.69
UBR3-202ENST00000392632 MAIP1Q8WWC4 291 aa4.46□□□□□ -1.69
UBR3-202ENST00000392632 AP5M1Q9H0R1 490 aa4.46□□□□□ -1.69
UBR3-202ENST00000392632 CCDC68Q9H2F9 335 aa4.46□□□□□ -1.69
UBR3-202ENST00000392632 LRFN2Q9ULH4 789 aa4.46□□□□□ -1.69
UBR3-202ENST00000392632 SH3TC1Q8TE82 1336 aa4.46□□□□□ -1.7
UBR3-202ENST00000392632 CCDC169A6NNP5 214 aa4.46□□□□□ -1.7
UBR3-202ENST00000392632 RIMBP2O15034 1052 aa4.46□□□□□ -1.7
UBR3-202ENST00000392632 PTPREP23469 700 aa4.46□□□□□ -1.7
UBR3-202ENST00000392632 GJC1P36383 396 aa4.46□□□□□ -1.7
UBR3-202ENST00000392632 LEO1Q8WVC0 666 aaPredicted RBP4.46□□□□□ -1.7
UBR3-202ENST00000392632 GLG1Q92896 1179 aa4.46□□□□□ -1.7
UBR3-202ENST00000392632 GCNAQ96QF7 691 aa4.46□□□□□ -1.7
UBR3-202ENST00000392632 FEZ2Q9UHY8 353 aaPredicted RBP4.46□□□□□ -1.7
UBR3-202ENST00000392632 DENND4BO75064 1496 aaPredicted RBP4.46□□□□□ -1.7
UBR3-202ENST00000392632 MRC2Q9UBG0 1479 aa4.46□□□□□ -1.7
UBR3-202ENST00000392632 PI4KAP2A4QPH2 592 aa4.46□□□□□ -1.7
UBR3-202ENST00000392632 SPDYE16A6NNV3 312 aaPredicted RBP4.46□□□□□ -1.7
UBR3-202ENST00000392632 IRS4O14654 1257 aaPredicted RBP4.46□□□□□ -1.7
UBR3-202ENST00000392632 GTF2F1P35269 517 aaKnown RBP eCLIP4.46□□□□□ -1.7
UBR3-202ENST00000392632 CCT2P78371 535 aaKnown RBP4.46□□□□□ -1.7
UBR3-202ENST00000392632 GUCY1B3Q02153 619 aa4.46□□□□□ -1.7
UBR3-202ENST00000392632 RAB3GAP1Q15042 981 aa4.46□□□□□ -1.7
UBR3-202ENST00000392632 SUPT20HL1Q3ZLR7 823 aa4.46□□□□□ -1.7
UBR3-202ENST00000392632 SPDYE2Q495Y8 402 aa4.46□□□□□ -1.7
UBR3-202ENST00000392632 ZNF772Q68DY9 489 aaPredicted RBP4.46□□□□□ -1.7
UBR3-202ENST00000392632 PI4KAP1Q8N8J0 262 aa4.46□□□□□ -1.7
UBR3-202ENST00000392632 LINS1Q8NG48 757 aa4.46□□□□□ -1.7
UBR3-202ENST00000392632 NUF2Q9BZD4 464 aa4.46□□□□□ -1.7
UBR3-202ENST00000392632 IFT122Q9HBG6 1241 aa4.46□□□□□ -1.7
UBR3-202ENST00000392632 NKIRAS1Q9NYS0 192 aa4.46□□□□□ -1.7
UBR3-202ENST00000392632 SEPT10Q9P0V9 454 aa4.46□□□□□ -1.7
UBR3-202ENST00000392632 CCPG1Q9ULG6 757 aa4.46□□□□□ -1.7
UBR3-202ENST00000392632 CCDC141Q6ZP82 1450 aa4.46□□□□□ -1.7
UBR3-202ENST00000392632 CASKIN1Q8WXD9 1431 aa4.46□□□□□ -1.7
UBR3-202ENST00000392632 PRPF6O94906 941 aaKnown RBP4.46□□□□□ -1.7
UBR3-202ENST00000392632 HIBADHP31937 336 aaKnown RBP4.46□□□□□ -1.7
UBR3-202ENST00000392632 PPP1R7Q15435 360 aa4.46□□□□□ -1.7
UBR3-202ENST00000392632 KIAA1841Q6NSI8 718 aa4.46□□□□□ -1.7
UBR3-202ENST00000392632 NSMFQ6X4W1 530 aa4.46□□□□□ -1.7
UBR3-202ENST00000392632 ZNF365Q70YC5 407 aa4.46□□□□□ -1.7
UBR3-202ENST00000392632 ATP2A3Q93084 1043 aa4.46□□□□□ -1.7
UBR3-202ENST00000392632 HAUS1Q96CS2 278 aa4.46□□□□□ -1.7
UBR3-202ENST00000392632 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.46□□□□□ -1.7
UBR3-202ENST00000392632 ZRANB1Q9UGI0 708 aa4.46□□□□□ -1.7
UBR3-202ENST00000392632 IPO11Q9UI26 975 aaKnown RBP4.46□□□□□ -1.7
UBR3-202ENST00000392632 SERPINA10Q9UK55 444 aa4.46□□□□□ -1.7
UBR3-202ENST00000392632 BCS1LQ9Y276 419 aa4.46□□□□□ -1.7
UBR3-202ENST00000392632 PCDH11XQ9BZA7 1347 aa4.46□□□□□ -1.7
UBR3-202ENST00000392632 PCDH11YQ9BZA8 1340 aa4.46□□□□□ -1.7
UBR3-202ENST00000392632 CTAGE15A4D2H0 777 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms