RNA–Protein interactions for RNA: ENST00000391057.1

RNU6-550P-201, Transcript of RNA, U6 small nuclear 550, pseudogene, humanhuman

BASIC

Gene RNU6-550P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-550P-201ENST00000391057 WISP1O95388 367 aa5.32□□□□□ -1.56
RNU6-550P-201ENST00000391057 ZNF157P51786 506 aaPredicted RBP5.32□□□□□ -1.56
RNU6-550P-201ENST00000391057 MBTPS1Q14703 1052 aa5.32□□□□□ -1.56
RNU6-550P-201ENST00000391057 TPTE2Q6XPS3 522 aa5.32□□□□□ -1.56
RNU6-550P-201ENST00000391057 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.32□□□□□ -1.56
RNU6-550P-201ENST00000391057 TXNRD3Q86VQ6 643 aa5.32□□□□□ -1.56
RNU6-550P-201ENST00000391057 AKTIPQ9H8T0 292 aa5.32□□□□□ -1.56
RNU6-550P-201ENST00000391057 VTI1BQ9UEU0 232 aa5.32□□□□□ -1.56
RNU6-550P-201ENST00000391057 TTF2Q9UNY4 1162 aaKnown RBP5.32□□□□□ -1.56
RNU6-550P-201ENST00000391057 ITGB2P05107 769 aa5.31□□□□□ -1.56
RNU6-550P-201ENST00000391057 CYP11A1P05108 521 aa5.31□□□□□ -1.56
RNU6-550P-201ENST00000391057 ZNF16P17020 682 aaPredicted RBP5.31□□□□□ -1.56
RNU6-550P-201ENST00000391057 GATA4P43694 442 aa5.31□□□□□ -1.56
RNU6-550P-201ENST00000391057 AP3B2Q13367 1082 aa5.31□□□□□ -1.56
RNU6-550P-201ENST00000391057 POU4F3Q15319 338 aa5.31□□□□□ -1.56
RNU6-550P-201ENST00000391057 GPAT2Q6NUI2 795 aa5.31□□□□□ -1.56
RNU6-550P-201ENST00000391057 AGGF1Q8N302 714 aaeCLIP5.31□□□□□ -1.56
RNU6-550P-201ENST00000391057 CORO1BQ9BR76 489 aa5.31□□□□□ -1.56
RNU6-550P-201ENST00000391057 TRIM56Q9BRZ2 755 aaKnown RBP5.31□□□□□ -1.56
RNU6-550P-201ENST00000391057 RUSC1Q9BVN2 902 aa5.31□□□□□ -1.56
RNU6-550P-201ENST00000391057 CEP44Q9C0F1 390 aa5.31□□□□□ -1.56
RNU6-550P-201ENST00000391057 TMEM39AQ9NV64 488 aa5.31□□□□□ -1.56
RNU6-550P-201ENST00000391057 LOC100289279A0A1B0GTE1 492 aa5.3□□□□□ -1.56
RNU6-550P-201ENST00000391057 FBXO24O75426 580 aa5.3□□□□□ -1.56
RNU6-550P-201ENST00000391057 MAOBP27338 520 aa5.3□□□□□ -1.56
RNU6-550P-201ENST00000391057 NOS3P29474 1203 aa5.3□□□□□ -1.56
RNU6-550P-201ENST00000391057 IREB2P48200 963 aaKnown RBP5.3□□□□□ -1.56
RNU6-550P-201ENST00000391057 HP1BP3Q5SSJ5 553 aaPredicted RBP5.3□□□□□ -1.56
RNU6-550P-201ENST00000391057 TMEM130Q8N3G9 435 aa5.3□□□□□ -1.56
RNU6-550P-201ENST00000391057 RGS22Q8NE09 1264 aa5.3□□□□□ -1.56
RNU6-550P-201ENST00000391057 ANKRD24Q8TF21 1146 aa5.3□□□□□ -1.56
RNU6-550P-201ENST00000391057 WFDC12Q8WWY7 111 aa5.3□□□□□ -1.56
RNU6-550P-201ENST00000391057 NECAB3Q96P71 396 aaPredicted RBP5.3□□□□□ -1.56
RNU6-550P-201ENST00000391057 NRSN2Q9GZP1 204 aa5.3□□□□□ -1.56
RNU6-550P-201ENST00000391057 RBM47A0AV96 593 aaKnown RBP5.29□□□□□ -1.56
RNU6-550P-201ENST00000391057 MSTNO14793 375 aa5.29□□□□□ -1.56
RNU6-550P-201ENST00000391057 ALX3O95076 343 aa5.29□□□□□ -1.56
RNU6-550P-201ENST00000391057 IGHA1P01876 353 aa5.29□□□□□ -1.56
RNU6-550P-201ENST00000391057 GLB1P16278 677 aa5.29□□□□□ -1.56
RNU6-550P-201ENST00000391057 KIAA1211Q6ZU35 1233 aa5.29□□□□□ -1.56
RNU6-550P-201ENST00000391057 SULF2Q8IWU5 870 aa5.29□□□□□ -1.56
RNU6-550P-201ENST00000391057 CRELD1Q96HD1 420 aa5.29□□□□□ -1.56
RNU6-550P-201ENST00000391057 SPOCK3Q9BQ16 436 aa5.29□□□□□ -1.56
RNU6-550P-201ENST00000391057 RNF208Q9H0X6 261 aa5.29□□□□□ -1.56
RNU6-550P-201ENST00000391057 SAMM50Q9Y512 469 aa5.29□□□□□ -1.56
RNU6-550P-201ENST00000391057 NME2P22392 152 aa5.28□□□□□ -1.56
RNU6-550P-201ENST00000391057 HNRNPUQ00839 825 aaKnown RBP eCLIP5.28□□□□□ -1.56
RNU6-550P-201ENST00000391057 PDE3AQ14432 1141 aa5.28□□□□□ -1.56
RNU6-550P-201ENST00000391057 CCDC85BQ15834 202 aaPredicted RBP5.28□□□□□ -1.56
RNU6-550P-201ENST00000391057 MEI1Q5TIA1 1274 aa5.28□□□□□ -1.56
RNU6-550P-201ENST00000391057 ANKRD34AQ69YU3 496 aa5.28□□□□□ -1.56
RNU6-550P-201ENST00000391057 FDX2Q6P4F2 183 aa5.28□□□□□ -1.56
RNU6-550P-201ENST00000391057 SV2BQ7L1I2 683 aa5.28□□□□□ -1.56
RNU6-550P-201ENST00000391057 EMILIN2Q9BXX0 1053 aa5.28□□□□□ -1.56
RNU6-550P-201ENST00000391057 CEP41Q9BYV8 373 aa5.28□□□□□ -1.56
RNU6-550P-201ENST00000391057 MEGF11A6BM72 1044 aa5.27□□□□□ -1.57
RNU6-550P-201ENST00000391057 ENC1O14682 589 aa5.27□□□□□ -1.57
RNU6-550P-201ENST00000391057 DLGAP3O95886 979 aa5.27□□□□□ -1.57
RNU6-550P-201ENST00000391057 PROCP04070 461 aa5.27□□□□□ -1.57
RNU6-550P-201ENST00000391057 CTSBP07858 339 aa5.27□□□□□ -1.57
RNU6-550P-201ENST00000391057 CELA3AP09093 270 aa5.27□□□□□ -1.57
RNU6-550P-201ENST00000391057 GSTP1P09211 210 aaKnown RBP5.27□□□□□ -1.57
RNU6-550P-201ENST00000391057 CTSHP09668 335 aa5.27□□□□□ -1.57
RNU6-550P-201ENST00000391057 ST13P50502 369 aaKnown RBP5.27□□□□□ -1.57
RNU6-550P-201ENST00000391057 TAF1CQ15572 869 aaPredicted RBP5.27□□□□□ -1.57
RNU6-550P-201ENST00000391057 NUTM2GQ5VZR2 741 aa5.27□□□□□ -1.57
RNU6-550P-201ENST00000391057 Q6ZS46 218 aa5.27□□□□□ -1.57
RNU6-550P-201ENST00000391057 MEGF10Q96KG7 1140 aa5.27□□□□□ -1.57
RNU6-550P-201ENST00000391057 ZC3H12CQ9C0D7 883 aaKnown RBP5.27□□□□□ -1.57
RNU6-550P-201ENST00000391057 CBX8Q9HC52 389 aa5.27□□□□□ -1.57
RNU6-550P-201ENST00000391057 CYP4F12Q9HCS2 524 aa5.27□□□□□ -1.57
RNU6-550P-201ENST00000391057 SART1O43290 800 aaKnown RBP5.26□□□□□ -1.57
RNU6-550P-201ENST00000391057 PAGE1O75459 146 aa5.26□□□□□ -1.57
RNU6-550P-201ENST00000391057 ECEL1O95672 775 aa5.26□□□□□ -1.57
RNU6-550P-201ENST00000391057 ARNTP27540 789 aa5.26□□□□□ -1.57
RNU6-550P-201ENST00000391057 MRPL58Q14197 206 aaKnown RBP5.26□□□□□ -1.57
RNU6-550P-201ENST00000391057 EXOSC6Q5RKV6 272 aaKnown RBP5.26□□□□□ -1.57
RNU6-550P-201ENST00000391057 TMPRSS13Q9BYE2 586 aa5.26□□□□□ -1.57
RNU6-550P-201ENST00000391057 RAD18Q9NS91 495 aa5.26□□□□□ -1.57
RNU6-550P-201ENST00000391057 LRRC14Q15048 493 aa5.25□□□□□ -1.57
RNU6-550P-201ENST00000391057 UVSSAQ2YD98 709 aa5.25□□□□□ -1.57
RNU6-550P-201ENST00000391057 PCNX4Q63HM2 1172 aa5.25□□□□□ -1.57
RNU6-550P-201ENST00000391057 TTBK2Q6IQ55 1244 aa5.25□□□□□ -1.57
RNU6-550P-201ENST00000391057 LLGL2Q6P1M3 1020 aa5.25□□□□□ -1.57
RNU6-550P-201ENST00000391057 PDZD3Q86UT5 571 aa5.25□□□□□ -1.57
RNU6-550P-201ENST00000391057 DZIP1LQ8IYY4 767 aaKnown RBP5.25□□□□□ -1.57
RNU6-550P-201ENST00000391057 C12orf50Q8NA57 414 aaPredicted RBP5.25□□□□□ -1.57
RNU6-550P-201ENST00000391057 SMG8Q8ND04 991 aaKnown RBP5.25□□□□□ -1.57
RNU6-550P-201ENST00000391057 STK35Q8TDR2 534 aa5.25□□□□□ -1.57
RNU6-550P-201ENST00000391057 KCNB2Q92953 911 aa5.25□□□□□ -1.57
RNU6-550P-201ENST00000391057 TP53INP1Q96A56 240 aa5.25□□□□□ -1.57
RNU6-550P-201ENST00000391057 CCDC86Q9H6F5 360 aaKnown RBP5.25□□□□□ -1.57
RNU6-550P-201ENST00000391057 TPSG1Q9NRR2 321 aa5.25□□□□□ -1.57
RNU6-550P-201ENST00000391057 KRT82Q9NSB4 513 aa5.25□□□□□ -1.57
RNU6-550P-201ENST00000391057 USP31Q70CQ4 1352 aa5.25□□□□□ -1.57
RNU6-550P-201ENST00000391057 GAS2O43903 313 aaKnown RBP5.24□□□□□ -1.57
RNU6-550P-201ENST00000391057 RLBP1P12271 317 aa5.24□□□□□ -1.57
RNU6-550P-201ENST00000391057 LIG1P18858 919 aa5.24□□□□□ -1.57
RNU6-550P-201ENST00000391057 LMNB1P20700 586 aa5.24□□□□□ -1.57
RNU6-550P-201ENST00000391057 DOC2BQ14184 412 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms