RNA–Protein interactions for RNA: ENST00000390654.7

COL23A1-201, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS P2 TSL 5 BASIC

Gene COL23A1, Length 3,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-201ENST00000390654 MROH7-TTC4A0A0A0MT08 1334 aa24.34■■□□□ 1.49
COL23A1-201ENST00000390654 AFDNP55196 1824 aaKnown RBP24.34■■□□□ 1.49
COL23A1-201ENST00000390654 RFX7Q2KHR2 1363 aa24.34■■□□□ 1.49
COL23A1-201ENST00000390654 LAMA4Q16363 1823 aa24.34■■□□□ 1.49
COL23A1-201ENST00000390654 GTPBP4Q9BZE4 634 aaKnown RBP24.33■■□□□ 1.49
COL23A1-201ENST00000390654 GPAA1O43292 621 aa24.33■■□□□ 1.49
COL23A1-201ENST00000390654 ANO1Q5XXA6 986 aa24.33■■□□□ 1.49
COL23A1-201ENST00000390654 KCNG4Q8TDN1 519 aa24.33■■□□□ 1.49
COL23A1-201ENST00000390654 DPF2Q92785 391 aa24.33■■□□□ 1.49
COL23A1-201ENST00000390654 DDX41Q9UJV9 622 aaKnown RBP24.33■■□□□ 1.49
COL23A1-201ENST00000390654 SIPA1L3O60292 1781 aaPredicted RBP24.33■■□□□ 1.48
COL23A1-201ENST00000390654 PNOCQ13519 176 aa24.33■■□□□ 1.48
COL23A1-201ENST00000390654 PPP1R13BQ96KQ4 1090 aa24.33■■□□□ 1.48
COL23A1-201ENST00000390654 CCDC82Q8N4S0 544 aa24.32■■□□□ 1.48
COL23A1-201ENST00000390654 NEDD4P46934 1319 aa24.32■■□□□ 1.48
COL23A1-201ENST00000390654 NCOA7Q8NI08 942 aa24.32■■□□□ 1.48
COL23A1-201ENST00000390654 IDH1O75874 414 aaKnown RBP24.31■■□□□ 1.48
COL23A1-201ENST00000390654 KIF23Q02241 960 aaPredicted RBP24.31■■□□□ 1.48
COL23A1-201ENST00000390654 MB21D2Q8IYB1 491 aaPredicted RBP24.31■■□□□ 1.48
COL23A1-201ENST00000390654 EVA1CP58658 441 aa24.31■■□□□ 1.48
COL23A1-201ENST00000390654 ATL3Q6DD88 541 aa24.31■■□□□ 1.48
COL23A1-201ENST00000390654 ALG1Q9BT22 464 aa24.31■■□□□ 1.48
COL23A1-201ENST00000390654 SLU7O95391 586 aaKnown RBP24.3■■□□□ 1.48
COL23A1-201ENST00000390654 SERPINC1P01008 464 aa24.3■■□□□ 1.48
COL23A1-201ENST00000390654 FANCCQ00597 558 aa24.3■■□□□ 1.48
COL23A1-201ENST00000390654 AXDND1Q5T1B0 1012 aaPredicted RBP24.3■■□□□ 1.48
COL23A1-201ENST00000390654 A0A1W2PQ27 194 aa24.3■■□□□ 1.48
COL23A1-201ENST00000390654 A0A1W2PQ64 194 aa24.3■■□□□ 1.48
COL23A1-201ENST00000390654 A0A1W2PQD8 194 aa24.3■■□□□ 1.48
COL23A1-201ENST00000390654 GSDMDP57764 484 aa24.3■■□□□ 1.48
COL23A1-201ENST00000390654 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.3■■□□□ 1.48
COL23A1-201ENST00000390654 SYKP43405 635 aa24.29■■□□□ 1.48
COL23A1-201ENST00000390654 NCAPHQ15003 741 aa24.29■■□□□ 1.48
COL23A1-201ENST00000390654 CFAP100Q494V2 611 aa24.29■■□□□ 1.48
COL23A1-201ENST00000390654 HELBQ8NG08 1087 aaPredicted RBP24.29■■□□□ 1.48
COL23A1-201ENST00000390654 POLR3EQ9NVU0 708 aa24.29■■□□□ 1.48
COL23A1-201ENST00000390654 ASAP1Q9ULH1 1129 aa24.29■■□□□ 1.48
COL23A1-201ENST00000390654 B4E1Z4 1266 aa24.29■■□□□ 1.48
COL23A1-201ENST00000390654 DHX16O60231 1041 aaKnown RBP24.29■■□□□ 1.48
COL23A1-201ENST00000390654 DNAJC10Q8IXB1 793 aa24.29■■□□□ 1.48
COL23A1-201ENST00000390654 DNAI1Q9UI46 699 aa24.29■■□□□ 1.48
COL23A1-201ENST00000390654 NLRP12P59046 1061 aa24.29■■□□□ 1.48
COL23A1-201ENST00000390654 SLC9C2Q5TAH2 1124 aa24.29■■□□□ 1.48
COL23A1-201ENST00000390654 CYB5R4Q7L1T6 521 aa24.29■■□□□ 1.48
COL23A1-201ENST00000390654 VPS37DQ86XT2 251 aa24.29■■□□□ 1.48
COL23A1-201ENST00000390654 ZNF397Q8NF99 534 aaPredicted RBP24.29■■□□□ 1.48
COL23A1-201ENST00000390654 ZBTB9Q96C00 473 aa24.29■■□□□ 1.48
COL23A1-201ENST00000390654 SNAP23O00161 211 aa24.28■■□□□ 1.48
COL23A1-201ENST00000390654 ATP2B1P20020 1258 aa24.28■■□□□ 1.48
COL23A1-201ENST00000390654 CCDC191Q8NCU4 936 aa24.28■■□□□ 1.48
COL23A1-201ENST00000390654 TMEM232C9JQI7 657 aa24.28■■□□□ 1.48
COL23A1-201ENST00000390654 FOXN1O15353 648 aa24.28■■□□□ 1.48
COL23A1-201ENST00000390654 TRDNQ13061 729 aa24.28■■□□□ 1.48
COL23A1-201ENST00000390654 NFXL1Q6ZNB6 911 aa24.28■■□□□ 1.48
COL23A1-201ENST00000390654 TBC1D10CQ8IV04 446 aa24.28■■□□□ 1.48
COL23A1-201ENST00000390654 OSBPL5Q9H0X9 879 aaPredicted RBP24.28■■□□□ 1.48
COL23A1-201ENST00000390654 GPR108Q9NPR9 543 aa24.28■■□□□ 1.48
COL23A1-201ENST00000390654 YEATS4O95619 227 aa24.27■■□□□ 1.48
COL23A1-201ENST00000390654 CDC27P30260 824 aa24.27■■□□□ 1.48
COL23A1-201ENST00000390654 METAP2P50579 478 aaKnown RBP eCLIP24.27■■□□□ 1.48
COL23A1-201ENST00000390654 SYCP1Q15431 976 aa24.27■■□□□ 1.48
COL23A1-201ENST00000390654 METTL24Q5JXM2 366 aa24.27■■□□□ 1.48
COL23A1-201ENST00000390654 ERO1AQ96HE7 468 aa24.27■■□□□ 1.48
COL23A1-201ENST00000390654 UBASH3AP57075 661 aa24.26■■□□□ 1.47
COL23A1-201ENST00000390654 APPBP2Q92624 585 aa24.26■■□□□ 1.47
COL23A1-201ENST00000390654 UTP14AQ9BVJ6 771 aaKnown RBP24.26■■□□□ 1.47
COL23A1-201ENST00000390654 MCAMP43121 646 aa24.26■■□□□ 1.47
COL23A1-201ENST00000390654 TPM4P67936 248 aa24.26■■□□□ 1.47
COL23A1-201ENST00000390654 KRT40Q6A162 431 aa24.26■■□□□ 1.47
COL23A1-201ENST00000390654 SHC4Q6S5L8 630 aa24.26■■□□□ 1.47
COL23A1-201ENST00000390654 CMTR1Q8N1G2 835 aaKnown RBP24.26■■□□□ 1.47
COL23A1-201ENST00000390654 NBPF3Q9H094 633 aa24.26■■□□□ 1.47
COL23A1-201ENST00000390654 EPC1Q9H2F5 836 aa24.25■■□□□ 1.47
COL23A1-201ENST00000390654 IFIT5Q13325 482 aaKnown RBP24.25■■□□□ 1.47
COL23A1-201ENST00000390654 SCN11AQ9UI33 1791 aa24.24■■□□□ 1.47
COL23A1-201ENST00000390654 ERICH4A6NGS2 130 aa24.24■■□□□ 1.47
COL23A1-201ENST00000390654 LDHAL6AQ6ZMR3 332 aa24.24■■□□□ 1.47
COL23A1-201ENST00000390654 BRAPQ7Z569 592 aa24.24■■□□□ 1.47
COL23A1-201ENST00000390654 CADPS2Q86UW7 1296 aa24.24■■□□□ 1.47
COL23A1-201ENST00000390654 TOMM22Q9NS69 142 aa24.24■■□□□ 1.47
COL23A1-201ENST00000390654 ARFGEF2Q9Y6D5 1785 aa24.24■■□□□ 1.47
COL23A1-201ENST00000390654 MST1RQ04912 1400 aa24.24■■□□□ 1.47
COL23A1-201ENST00000390654 CMA1P23946 247 aa24.24■■□□□ 1.47
COL23A1-201ENST00000390654 PDILTQ8N807 584 aa24.24■■□□□ 1.47
COL23A1-201ENST00000390654 HSD3B7Q9H2F3 369 aa24.24■■□□□ 1.47
COL23A1-201ENST00000390654 FANCLQ9NW38 375 aa24.24■■□□□ 1.47
COL23A1-201ENST00000390654 ZNF446Q9NWS9 450 aa24.24■■□□□ 1.47
COL23A1-201ENST00000390654 SPATA31A3Q5VYP0 1347 aa24.24■■□□□ 1.47
COL23A1-201ENST00000390654 PHRF1Q9P1Y6 1649 aaKnown RBP24.24■■□□□ 1.47
COL23A1-201ENST00000390654 HLFQ16534 295 aa24.23■■□□□ 1.47
COL23A1-201ENST00000390654 ZNF827Q17R98 1081 aa24.23■■□□□ 1.47
COL23A1-201ENST00000390654 LONRF3Q496Y0 759 aa24.23■■□□□ 1.47
COL23A1-201ENST00000390654 ZKSCAN3Q9BRR0 538 aa24.23■■□□□ 1.47
COL23A1-201ENST00000390654 PCDH11XQ9BZA7 1347 aa24.23■■□□□ 1.47
COL23A1-201ENST00000390654 PCDH11YQ9BZA8 1340 aa24.23■■□□□ 1.47
COL23A1-201ENST00000390654 EVCP57679 992 aa24.23■■□□□ 1.47
COL23A1-201ENST00000390654 SLC39A14Q15043 492 aa24.23■■□□□ 1.47
COL23A1-201ENST00000390654 RRP12Q5JTH9 1297 aaKnown RBP24.23■■□□□ 1.47
COL23A1-201ENST00000390654 KRT222Q8N1A0 295 aa24.23■■□□□ 1.47
COL23A1-201ENST00000390654 CCDC150Q8NCX0 1101 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms