RNA–Protein interactions for RNA: ENST00000390357.3

TRBV4-1-201, Transcript of T cell receptor beta variable 4-1, humanhuman

APPRIS P1 BASIC

Gene TRBV4-1, Length 373 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1-201ENST00000390357 KLHDC4Q8TBB5 520 aa16.95■□□□□ 0.3
TRBV4-1-201ENST00000390357 WDR66Q8TBY9 1149 aa16.95■□□□□ 0.3
TRBV4-1-201ENST00000390357 GNL3LQ9NVN8 582 aaKnown RBP16.95■□□□□ 0.3
TRBV4-1-201ENST00000390357 ZNF70Q9UC06 446 aaPredicted RBP16.95■□□□□ 0.3
TRBV4-1-201ENST00000390357 JAG2Q9Y219 1238 aa16.95■□□□□ 0.3
TRBV4-1-201ENST00000390357 CLRN2A0PK11 232 aa16.94■□□□□ 0.3
TRBV4-1-201ENST00000390357 BCAMP50895 628 aa16.94■□□□□ 0.3
TRBV4-1-201ENST00000390357 DGKZQ13574 1117 aa16.94■□□□□ 0.3
TRBV4-1-201ENST00000390357 TEKT1Q969V4 418 aa16.94■□□□□ 0.3
TRBV4-1-201ENST00000390357 CFHR5Q9BXR6 569 aa16.94■□□□□ 0.3
TRBV4-1-201ENST00000390357 TDRD3Q9H7E2 651 aaKnown RBP16.94■□□□□ 0.3
TRBV4-1-201ENST00000390357 ARAP2Q8WZ64 1704 aa16.93■□□□□ 0.3
TRBV4-1-201ENST00000390357 MANSC4A6NHS7 340 aaPredicted RBP16.93■□□□□ 0.3
TRBV4-1-201ENST00000390357 PRKG1Q13976 671 aa16.93■□□□□ 0.3
TRBV4-1-201ENST00000390357 FKBP1CQ5VVH2 108 aa16.93■□□□□ 0.3
TRBV4-1-201ENST00000390357 SPRYD7Q5W111 196 aa16.93■□□□□ 0.3
TRBV4-1-201ENST00000390357 HHIPL2Q6UWX4 724 aa16.93■□□□□ 0.3
TRBV4-1-201ENST00000390357 ATG9AQ7Z3C6 839 aa16.93■□□□□ 0.3
TRBV4-1-201ENST00000390357 ANKRD13AQ8IZ07 590 aa16.93■□□□□ 0.3
TRBV4-1-201ENST00000390357 HOOK2Q96ED9 719 aa16.93■□□□□ 0.3
TRBV4-1-201ENST00000390357 ZDHHC15Q96MV8 337 aa16.93■□□□□ 0.3
TRBV4-1-201ENST00000390357 MCOLN1Q9GZU1 580 aa16.93■□□□□ 0.3
TRBV4-1-201ENST00000390357 COPRSQ9NQ92 184 aa16.93■□□□□ 0.3
TRBV4-1-201ENST00000390357 PCDHAC2Q9Y5I4 1007 aa16.93■□□□□ 0.3
TRBV4-1-201ENST00000390357 SEMA3EO15041 775 aa16.92■□□□□ 0.3
TRBV4-1-201ENST00000390357 USP2O75604 605 aaPredicted RBP16.92■□□□□ 0.3
TRBV4-1-201ENST00000390357 CHAF1AQ13111 956 aaPredicted RBP16.92■□□□□ 0.3
TRBV4-1-201ENST00000390357 PKN2Q16513 984 aaKnown RBP16.92■□□□□ 0.3
TRBV4-1-201ENST00000390357 NBPF12Q5TAG4 269 aaPredicted RBP16.92■□□□□ 0.3
TRBV4-1-201ENST00000390357 TMOD2Q9NZR1 351 aa16.92■□□□□ 0.3
TRBV4-1-201ENST00000390357 LRRFIP2Q9Y608 721 aaKnown RBP16.92■□□□□ 0.3
TRBV4-1-201ENST00000390357 CCDC85CA6NKD9 419 aa16.91■□□□□ 0.3
TRBV4-1-201ENST00000390357 OTUD7BQ6GQQ9 843 aa16.91■□□□□ 0.3
TRBV4-1-201ENST00000390357 ATF7IPQ6VMQ6 1270 aa16.91■□□□□ 0.3
TRBV4-1-201ENST00000390357 FAM83AQ86UY5 434 aa16.91■□□□□ 0.3
TRBV4-1-201ENST00000390357 IQSEC3Q9UPP2 1182 aaPredicted RBP16.91■□□□□ 0.3
TRBV4-1-201ENST00000390357 AKAP2Q9Y2D5 859 aa16.91■□□□□ 0.3
TRBV4-1-201ENST00000390357 MTX1Q13505 466 aa16.9■□□□□ 0.3
TRBV4-1-201ENST00000390357 ATP2B3Q16720 1220 aa16.9■□□□□ 0.3
TRBV4-1-201ENST00000390357 DENND2AQ9ULE3 1009 aa16.9■□□□□ 0.3
TRBV4-1-201ENST00000390357 MYH13Q9UKX3 1938 aa16.9■□□□□ 0.3
TRBV4-1-201ENST00000390357 RGS19P49795 217 aa16.89■□□□□ 0.29
TRBV4-1-201ENST00000390357 DIEXFQ68CQ4 756 aaKnown RBP16.89■□□□□ 0.29
TRBV4-1-201ENST00000390357 CTU1Q7Z7A3 348 aaKnown RBP16.89■□□□□ 0.29
TRBV4-1-201ENST00000390357 ZGPATQ8N5A5 531 aaKnown RBP16.89■□□□□ 0.29
TRBV4-1-201ENST00000390357 TEPSINQ96N21 525 aa16.89■□□□□ 0.29
TRBV4-1-201ENST00000390357 MEIS3Q99687 375 aa16.89■□□□□ 0.29
TRBV4-1-201ENST00000390357 SIL1Q9H173 461 aa16.89■□□□□ 0.29
TRBV4-1-201ENST00000390357 TCP10L2B9ZVM9 353 aa16.88■□□□□ 0.29
TRBV4-1-201ENST00000390357 WNK4Q96J92 1243 aa16.88■□□□□ 0.29
TRBV4-1-201ENST00000390357 SALL1Q9NSC2 1324 aa16.88■□□□□ 0.29
TRBV4-1-201ENST00000390357 LAMB1P07942 1786 aa16.87■□□□□ 0.29
TRBV4-1-201ENST00000390357 GPR25O00155 361 aa16.87■□□□□ 0.29
TRBV4-1-201ENST00000390357 SRGAP3O43295 1099 aa16.87■□□□□ 0.29
TRBV4-1-201ENST00000390357 TBC1D8O95759 1140 aa16.87■□□□□ 0.29
TRBV4-1-201ENST00000390357 GNAI2P04899 355 aa16.87■□□□□ 0.29
TRBV4-1-201ENST00000390357 MAP3K9P80192 1104 aa16.87■□□□□ 0.29
TRBV4-1-201ENST00000390357 APOBEC3HQ6NTF7 200 aaKnown RBP16.87■□□□□ 0.29
TRBV4-1-201ENST00000390357 IFNL1Q8IU54 200 aa16.87■□□□□ 0.29
TRBV4-1-201ENST00000390357 LDHBP07195 334 aaKnown RBP16.86■□□□□ 0.29
TRBV4-1-201ENST00000390357 TRIM27P14373 513 aa16.86■□□□□ 0.29
TRBV4-1-201ENST00000390357 MKRN3Q13064 507 aaKnown RBP16.86■□□□□ 0.29
TRBV4-1-201ENST00000390357 GRIK5Q16478 980 aa16.86■□□□□ 0.29
TRBV4-1-201ENST00000390357 ZKSCAN2Q63HK3 967 aa16.86■□□□□ 0.29
TRBV4-1-201ENST00000390357 SLF2Q8IX21 1173 aa16.86■□□□□ 0.29
TRBV4-1-201ENST00000390357 ZNF296Q8WUU4 475 aaPredicted RBP16.86■□□□□ 0.29
TRBV4-1-201ENST00000390357 FRAT1Q92837 279 aaPredicted RBP16.86■□□□□ 0.29
TRBV4-1-201ENST00000390357 AOX1Q06278 1338 aa16.86■□□□□ 0.29
TRBV4-1-201ENST00000390357 SSC5DA1L4H1 1573 aa16.85■□□□□ 0.29
TRBV4-1-201ENST00000390357 TESPA1A2RU30 521 aaPredicted RBP16.85■□□□□ 0.29
TRBV4-1-201ENST00000390357 BCAR3O75815 825 aa16.85■□□□□ 0.29
TRBV4-1-201ENST00000390357 DCAF15Q66K64 600 aa16.85■□□□□ 0.29
TRBV4-1-201ENST00000390357 MIER1Q8N108 512 aa16.85■□□□□ 0.29
TRBV4-1-201ENST00000390357 CLMNQ96JQ2 1002 aa16.85■□□□□ 0.29
TRBV4-1-201ENST00000390357 TMEM39BQ9GZU3 492 aa16.85■□□□□ 0.29
TRBV4-1-201ENST00000390357 FZD1Q9UP38 647 aa16.85■□□□□ 0.29
TRBV4-1-201ENST00000390357 CSADQ9Y600 493 aa16.85■□□□□ 0.29
TRBV4-1-201ENST00000390357 PDS5AQ29RF7 1337 aaKnown RBP16.85■□□□□ 0.29
TRBV4-1-201ENST00000390357 FKTNO75072 461 aa16.84■□□□□ 0.29
TRBV4-1-201ENST00000390357 HNRNPUQ00839 825 aaKnown RBP eCLIP16.84■□□□□ 0.29
TRBV4-1-201ENST00000390357 SPTY2D1Q68D10 685 aaPredicted RBP16.84■□□□□ 0.29
TRBV4-1-201ENST00000390357 CCDC102BQ68D86 513 aa16.84■□□□□ 0.29
TRBV4-1-201ENST00000390357 FAM151AQ8WW52 585 aa16.84■□□□□ 0.29
TRBV4-1-201ENST00000390357 PA2G4Q9UQ80 394 aaKnown RBP16.84■□□□□ 0.29
TRBV4-1-201ENST00000390357 GTF2A2P52657 109 aa16.83■□□□□ 0.28
TRBV4-1-201ENST00000390357 TIMM10P62072 90 aa16.83■□□□□ 0.28
TRBV4-1-201ENST00000390357 G3BP1Q13283 466 aaKnown RBP eCLIP16.83■□□□□ 0.28
TRBV4-1-201ENST00000390357 MVPQ14764 893 aaKnown RBP16.83■□□□□ 0.28
TRBV4-1-201ENST00000390357 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.83■□□□□ 0.28
TRBV4-1-201ENST00000390357 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.83■□□□□ 0.28
TRBV4-1-201ENST00000390357 RPAP1Q9BWH6 1393 aaPredicted RBP16.82■□□□□ 0.28
TRBV4-1-201ENST00000390357 WDHD1O75717 1129 aaPredicted RBP16.82■□□□□ 0.28
TRBV4-1-201ENST00000390357 MLLT1Q03111 559 aaPredicted RBP16.82■□□□□ 0.28
TRBV4-1-201ENST00000390357 OPTNQ96CV9 577 aa16.82■□□□□ 0.28
TRBV4-1-201ENST00000390357 FAM163AQ96GL9 167 aaPredicted RBP16.82■□□□□ 0.28
TRBV4-1-201ENST00000390357 A0A1B0GUL7 405 aa16.81■□□□□ 0.28
TRBV4-1-201ENST00000390357 PHKA1P46020 1223 aa16.81■□□□□ 0.28
TRBV4-1-201ENST00000390357 ERO1BQ86YB8 467 aa16.81■□□□□ 0.28
TRBV4-1-201ENST00000390357 XAGE2Q96GT9 111 aa16.81■□□□□ 0.28
TRBV4-1-201ENST00000390357 ZNF341Q9BYN7 854 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms