RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 HELLSQ9NRZ9 838 aa16.24■□□□□ 0.19
RTF1-201ENST00000389629 TAF5LO75529 589 aa16.23■□□□□ 0.19
RTF1-201ENST00000389629 LONRF3Q496Y0 759 aa16.23■□□□□ 0.19
RTF1-201ENST00000389629 OTUD6BQ8N6M0 293 aa16.23■□□□□ 0.19
RTF1-201ENST00000389629 GPR161Q8N6U8 529 aaKnown RBP16.23■□□□□ 0.19
RTF1-201ENST00000389629 AKR1B15C9JRZ8 316 aaPredicted RBP16.23■□□□□ 0.19
RTF1-201ENST00000389629 PPARDQ03181 441 aa16.23■□□□□ 0.19
RTF1-201ENST00000389629 TAF4BQ92750 862 aa16.23■□□□□ 0.19
RTF1-201ENST00000389629 PRR36Q9H6K5 1346 aa16.23■□□□□ 0.19
RTF1-201ENST00000389629 USO1O60763 962 aaKnown RBP16.23■□□□□ 0.19
RTF1-201ENST00000389629 CCDC144BQ3MJ40 725 aa16.23■□□□□ 0.19
RTF1-201ENST00000389629 KANK3Q6NY19 840 aa16.23■□□□□ 0.19
RTF1-201ENST00000389629 AFAP1L1Q8TED9 768 aa16.23■□□□□ 0.19
RTF1-201ENST00000389629 PCDHA7Q9UN72 937 aa16.23■□□□□ 0.19
RTF1-201ENST00000389629 ATP10DQ9P241 1426 aa16.23■□□□□ 0.19
RTF1-201ENST00000389629 RPAP1Q9BWH6 1393 aaPredicted RBP16.23■□□□□ 0.19
RTF1-201ENST00000389629 RRAGBQ5VZM2 374 aa16.23■□□□□ 0.19
RTF1-201ENST00000389629 IL25Q9H293 177 aa16.23■□□□□ 0.19
RTF1-201ENST00000389629 ZHX3Q9H4I2 956 aa16.23■□□□□ 0.19
RTF1-201ENST00000389629 PNMA6AP0CW24 399 aaPredicted RBP16.22■□□□□ 0.19
RTF1-201ENST00000389629 POLA2Q14181 598 aa16.22■□□□□ 0.19
RTF1-201ENST00000389629 SLC9C2Q5TAH2 1124 aa16.22■□□□□ 0.19
RTF1-201ENST00000389629 ADALQ6DHV7 355 aa16.22■□□□□ 0.19
RTF1-201ENST00000389629 E7EWF7 191 aa16.22■□□□□ 0.19
RTF1-201ENST00000389629 ATP5JP18859 108 aa16.22■□□□□ 0.19
RTF1-201ENST00000389629 PROSER3Q2NL68 480 aa16.22■□□□□ 0.19
RTF1-201ENST00000389629 EFCAB8A8MWE9 144 aa16.22■□□□□ 0.19
RTF1-201ENST00000389629 HSF2BPO75031 334 aa16.22■□□□□ 0.19
RTF1-201ENST00000389629 ERLIN2O94905 339 aa16.22■□□□□ 0.19
RTF1-201ENST00000389629 IRX5P78411 483 aaPredicted RBP16.22■□□□□ 0.19
RTF1-201ENST00000389629 MAP3K12Q12852 859 aa16.22■□□□□ 0.19
RTF1-201ENST00000389629 GCKRQ14397 625 aa16.22■□□□□ 0.19
RTF1-201ENST00000389629 FAM76AQ8TAV0 307 aa16.22■□□□□ 0.19
RTF1-201ENST00000389629 PPM1EQ8WY54 764 aa16.22■□□□□ 0.19
RTF1-201ENST00000389629 NDUFA8P51970 172 aa16.22■□□□□ 0.19
RTF1-201ENST00000389629 TDRD12Q587J7 1177 aaKnown RBP16.22■□□□□ 0.19
RTF1-201ENST00000389629 CCDC113Q9H0I3 377 aa16.22■□□□□ 0.19
RTF1-201ENST00000389629 SETBP1Q9Y6X0 1596 aa16.21■□□□□ 0.19
RTF1-201ENST00000389629 ABCC3O15438 1527 aa16.21■□□□□ 0.19
RTF1-201ENST00000389629 TRIM21P19474 475 aaKnown RBP16.21■□□□□ 0.19
RTF1-201ENST00000389629 CCT6AP40227 531 aaKnown RBP16.21■□□□□ 0.19
RTF1-201ENST00000389629 TRMT44Q8IYL2 757 aaKnown RBP16.21■□□□□ 0.19
RTF1-201ENST00000389629 IGSF22Q8N9C0 903 aa16.21■□□□□ 0.19
RTF1-201ENST00000389629 PDE11AQ9HCR9 933 aa16.21■□□□□ 0.19
RTF1-201ENST00000389629 MYO6Q9UM54 1294 aa16.21■□□□□ 0.19
RTF1-201ENST00000389629 PFKFB2O60825 505 aa16.21■□□□□ 0.19
RTF1-201ENST00000389629 SSBP05455 408 aaKnown RBP eCLIP16.21■□□□□ 0.19
RTF1-201ENST00000389629 NF2P35240 595 aa16.21■□□□□ 0.19
RTF1-201ENST00000389629 METTL22Q9BUU2 404 aaPredicted RBP16.21■□□□□ 0.19
RTF1-201ENST00000389629 ZCCHC17Q9NP64 241 aaKnown RBP16.21■□□□□ 0.19
RTF1-201ENST00000389629 NFE2L3Q9Y4A8 694 aa16.21■□□□□ 0.19
RTF1-201ENST00000389629 RANBP6O60518 1105 aaKnown RBP16.21■□□□□ 0.19
RTF1-201ENST00000389629 CDC25BP30305 580 aa16.21■□□□□ 0.19
RTF1-201ENST00000389629 MTIF2P46199 727 aaKnown RBP16.21■□□□□ 0.18
RTF1-201ENST00000389629 MFSD6Q6ZSS7 791 aa16.21■□□□□ 0.18
RTF1-201ENST00000389629 CCDC91Q7Z6B0 441 aa16.21■□□□□ 0.18
RTF1-201ENST00000389629 YEATS2Q9ULM3 1422 aa16.2■□□□□ 0.18
RTF1-201ENST00000389629 CACNA2D4Q7Z3S7 1137 aa16.2■□□□□ 0.18
RTF1-201ENST00000389629 ADGRB3O60242 1522 aa16.2■□□□□ 0.18
RTF1-201ENST00000389629 CYP21A2P08686 494 aa16.2■□□□□ 0.18
RTF1-201ENST00000389629 CCDC96Q2M329 555 aa16.2■□□□□ 0.18
RTF1-201ENST00000389629 NUTM2AQ8IVF1 878 aaPredicted RBP16.2■□□□□ 0.18
RTF1-201ENST00000389629 KCNH3Q9ULD8 1083 aa16.2■□□□□ 0.18
RTF1-201ENST00000389629 ANKRD65E5RJM6 399 aa16.2■□□□□ 0.18
RTF1-201ENST00000389629 CKAP4Q07065 602 aaKnown RBP16.2■□□□□ 0.18
RTF1-201ENST00000389629 DPCR1Q3MIW9 517 aa16.2■□□□□ 0.18
RTF1-201ENST00000389629 MYSM1Q5VVJ2 828 aa16.2■□□□□ 0.18
RTF1-201ENST00000389629 PRDM11Q9NQV5 511 aa16.2■□□□□ 0.18
RTF1-201ENST00000389629 PPP2R2CQ9Y2T4 447 aa16.2■□□□□ 0.18
RTF1-201ENST00000389629 RRP15Q9Y3B9 282 aaKnown RBP16.2■□□□□ 0.18
RTF1-201ENST00000389629 GIGYF1O75420 1035 aaPredicted RBP16.2■□□□□ 0.18
RTF1-201ENST00000389629 ZNF594Q96JF6 807 aaPredicted RBP16.2■□□□□ 0.18
RTF1-201ENST00000389629 PGBD1Q96JS3 809 aa16.2■□□□□ 0.18
RTF1-201ENST00000389629 CTAGE1Q96RT6 745 aa16.2■□□□□ 0.18
RTF1-201ENST00000389629 MORC2Q9Y6X9 1032 aaPredicted RBP16.2■□□□□ 0.18
RTF1-201ENST00000389629 IGSF1Q8N6C5 1336 aa16.19■□□□□ 0.18
RTF1-201ENST00000389629 PFKFB1P16118 471 aa16.19■□□□□ 0.18
RTF1-201ENST00000389629 CCDC178Q5BJE1 867 aa16.19■□□□□ 0.18
RTF1-201ENST00000389629 KRI1Q8N9T8 703 aaKnown RBP16.19■□□□□ 0.18
RTF1-201ENST00000389629 PNOCQ13519 176 aa16.19■□□□□ 0.18
RTF1-201ENST00000389629 ZNF790Q6PG37 636 aa16.19■□□□□ 0.18
RTF1-201ENST00000389629 IFFO1Q0D2I5 559 aa16.19■□□□□ 0.18
RTF1-201ENST00000389629 RESTQ13127 1097 aa16.19■□□□□ 0.18
RTF1-201ENST00000389629 CHRNA2Q15822 529 aa16.19■□□□□ 0.18
RTF1-201ENST00000389629 GOLGA5Q8TBA6 731 aa16.19■□□□□ 0.18
RTF1-201ENST00000389629 NAPGQ99747 312 aaPredicted RBP16.19■□□□□ 0.18
RTF1-201ENST00000389629 ANKRD18BA2A2Z9 1011 aa16.18■□□□□ 0.18
RTF1-201ENST00000389629 AKR1B10O60218 316 aa16.18■□□□□ 0.18
RTF1-201ENST00000389629 WTAPQ15007 396 aa16.18■□□□□ 0.18
RTF1-201ENST00000389629 RTN1Q16799 776 aa16.18■□□□□ 0.18
RTF1-201ENST00000389629 GBP6Q6ZN66 633 aa16.18■□□□□ 0.18
RTF1-201ENST00000389629 ANKRD7Q92527 254 aa16.18■□□□□ 0.18
RTF1-201ENST00000389629 PHKBQ93100 1093 aa16.18■□□□□ 0.18
RTF1-201ENST00000389629 CLIC4Q9Y696 253 aa16.18■□□□□ 0.18
RTF1-201ENST00000389629 PSDA5PKW4 1024 aaPredicted RBP16.18■□□□□ 0.18
RTF1-201ENST00000389629 TTF1Q15361 905 aaPredicted RBP16.18■□□□□ 0.18
RTF1-201ENST00000389629 GNL3LQ9NVN8 582 aaKnown RBP16.18■□□□□ 0.18
RTF1-201ENST00000389629 GBP2P32456 591 aaPredicted RBP16.18■□□□□ 0.18
RTF1-201ENST00000389629 KRT28Q7Z3Y7 464 aa16.18■□□□□ 0.18
RTF1-201ENST00000389629 TRIM47Q96LD4 638 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms