RNA–Protein interactions for RNA: ENST00000384344.1

RNU6-39P-201, Transcript of RNA, U6 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6-39P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-39P-201ENST00000384344 CRELD1Q96HD1 420 aa5.63□□□□□ -1.51
RNU6-39P-201ENST00000384344 EMILIN2Q9BXX0 1053 aa5.63□□□□□ -1.51
RNU6-39P-201ENST00000384344 CEP41Q9BYV8 373 aa5.63□□□□□ -1.51
RNU6-39P-201ENST00000384344 C1QTNF9BB2RNN3 333 aa5.62□□□□□ -1.51
RNU6-39P-201ENST00000384344 SELPP16109 830 aa5.62□□□□□ -1.51
RNU6-39P-201ENST00000384344 LMNB1P20700 586 aa5.62□□□□□ -1.51
RNU6-39P-201ENST00000384344 GATA4P43694 442 aa5.62□□□□□ -1.51
RNU6-39P-201ENST00000384344 TXNRD3Q86VQ6 643 aa5.62□□□□□ -1.51
RNU6-39P-201ENST00000384344 TMEM130Q8N3G9 435 aa5.62□□□□□ -1.51
RNU6-39P-201ENST00000384344 FAM161BQ96MY7 647 aa5.62□□□□□ -1.51
RNU6-39P-201ENST00000384344 RUSC1Q9BVN2 902 aa5.62□□□□□ -1.51
RNU6-39P-201ENST00000384344 RNF208Q9H0X6 261 aa5.62□□□□□ -1.51
RNU6-39P-201ENST00000384344 F8W735 103 aaPredicted RBP5.61□□□□□ -1.51
RNU6-39P-201ENST00000384344 DDX3YO15523 660 aaKnown RBP5.61□□□□□ -1.51
RNU6-39P-201ENST00000384344 SART1O43290 800 aaKnown RBP5.61□□□□□ -1.51
RNU6-39P-201ENST00000384344 IGHA1P01876 353 aa5.61□□□□□ -1.51
RNU6-39P-201ENST00000384344 RLBP1P12271 317 aa5.61□□□□□ -1.51
RNU6-39P-201ENST00000384344 GLB1P16278 677 aa5.61□□□□□ -1.51
RNU6-39P-201ENST00000384344 MAOBP27338 520 aa5.61□□□□□ -1.51
RNU6-39P-201ENST00000384344 ST13P50502 369 aaKnown RBP5.61□□□□□ -1.51
RNU6-39P-201ENST00000384344 ZNF157P51786 506 aaPredicted RBP5.61□□□□□ -1.51
RNU6-39P-201ENST00000384344 TAGLNQ01995 201 aaKnown RBP5.61□□□□□ -1.51
RNU6-39P-201ENST00000384344 ADGRE1Q14246 886 aa5.61□□□□□ -1.51
RNU6-39P-201ENST00000384344 MBTPS1Q14703 1052 aa5.61□□□□□ -1.51
RNU6-39P-201ENST00000384344 CCDC85BQ15834 202 aaPredicted RBP5.61□□□□□ -1.51
RNU6-39P-201ENST00000384344 PLA2G4EQ3MJ16 856 aa5.61□□□□□ -1.51
RNU6-39P-201ENST00000384344 NUTM2GQ5VZR2 741 aa5.61□□□□□ -1.51
RNU6-39P-201ENST00000384344 ANKRD34AQ69YU3 496 aa5.61□□□□□ -1.51
RNU6-39P-201ENST00000384344 FDX2Q6P4F2 183 aa5.61□□□□□ -1.51
RNU6-39P-201ENST00000384344 SV2BQ7L1I2 683 aa5.61□□□□□ -1.51
RNU6-39P-201ENST00000384344 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.61□□□□□ -1.51
RNU6-39P-201ENST00000384344 CD163Q86VB7 1156 aa5.61□□□□□ -1.51
RNU6-39P-201ENST00000384344 RGS22Q8NE09 1264 aa5.61□□□□□ -1.51
RNU6-39P-201ENST00000384344 UBASH3BQ8TF42 649 aa5.61□□□□□ -1.51
RNU6-39P-201ENST00000384344 CYP4F12Q9HCS2 524 aa5.61□□□□□ -1.51
RNU6-39P-201ENST00000384344 LOC100289279A0A1B0GTE1 492 aa5.6□□□□□ -1.51
RNU6-39P-201ENST00000384344 MSTNO14793 375 aa5.6□□□□□ -1.51
RNU6-39P-201ENST00000384344 ADAM11O75078 769 aa5.6□□□□□ -1.51
RNU6-39P-201ENST00000384344 FBXO24O75426 580 aa5.6□□□□□ -1.51
RNU6-39P-201ENST00000384344 NME2P22392 152 aa5.6□□□□□ -1.51
RNU6-39P-201ENST00000384344 CHRNA4P43681 627 aa5.6□□□□□ -1.51
RNU6-39P-201ENST00000384344 IREB2P48200 963 aaKnown RBP5.6□□□□□ -1.51
RNU6-39P-201ENST00000384344 GSK3AP49840 483 aa5.6□□□□□ -1.51
RNU6-39P-201ENST00000384344 FAAP100Q0VG06 881 aa5.6□□□□□ -1.51
RNU6-39P-201ENST00000384344 PDE3AQ14432 1141 aa5.6□□□□□ -1.51
RNU6-39P-201ENST00000384344 LRRC14Q15048 493 aa5.6□□□□□ -1.51
RNU6-39P-201ENST00000384344 TAF1CQ15572 869 aaPredicted RBP5.6□□□□□ -1.51
RNU6-39P-201ENST00000384344 HGSNATQ68CP4 663 aa5.6□□□□□ -1.51
RNU6-39P-201ENST00000384344 SULF2Q8IWU5 870 aa5.6□□□□□ -1.51
RNU6-39P-201ENST00000384344 WFDC12Q8WWY7 111 aa5.6□□□□□ -1.51
RNU6-39P-201ENST00000384344 FOXD4L4Q8WXT5 416 aaPredicted RBP5.6□□□□□ -1.51
RNU6-39P-201ENST00000384344 NECAB3Q96P71 396 aaPredicted RBP5.6□□□□□ -1.51
RNU6-39P-201ENST00000384344 CBX8Q9HC52 389 aa5.6□□□□□ -1.51
RNU6-39P-201ENST00000384344 RAD18Q9NS91 495 aa5.6□□□□□ -1.51
RNU6-39P-201ENST00000384344 KCNK4Q9NYG8 393 aa5.6□□□□□ -1.51
RNU6-39P-201ENST00000384344 MEGF11A6BM72 1044 aa5.59□□□□□ -1.51
RNU6-39P-201ENST00000384344 EXOSC6Q5RKV6 272 aaKnown RBP5.59□□□□□ -1.51
RNU6-39P-201ENST00000384344 GPAT2Q6NUI2 795 aa5.59□□□□□ -1.51
RNU6-39P-201ENST00000384344 RNF19AQ9NV58 838 aa5.59□□□□□ -1.51
RNU6-39P-201ENST00000384344 GAS2O43903 313 aaKnown RBP5.58□□□□□ -1.52
RNU6-39P-201ENST00000384344 WISP1O95388 367 aa5.58□□□□□ -1.52
RNU6-39P-201ENST00000384344 GSTP1P09211 210 aaKnown RBP5.58□□□□□ -1.52
RNU6-39P-201ENST00000384344 SLFN14P0C7P3 912 aa5.58□□□□□ -1.52
RNU6-39P-201ENST00000384344 ARNTP27540 789 aa5.58□□□□□ -1.52
RNU6-39P-201ENST00000384344 KIAA1211Q6ZU35 1233 aa5.58□□□□□ -1.52
RNU6-39P-201ENST00000384344 KCNB2Q92953 911 aa5.58□□□□□ -1.52
RNU6-39P-201ENST00000384344 ACSBG1Q96GR2 724 aa5.58□□□□□ -1.52
RNU6-39P-201ENST00000384344 TRIM56Q9BRZ2 755 aaKnown RBP5.58□□□□□ -1.52
RNU6-39P-201ENST00000384344 NOC4LQ9BVI4 516 aaKnown RBP5.58□□□□□ -1.52
RNU6-39P-201ENST00000384344 ENC1O14682 589 aa5.57□□□□□ -1.52
RNU6-39P-201ENST00000384344 TM4SF5O14894 197 aa5.57□□□□□ -1.52
RNU6-39P-201ENST00000384344 NOS3P29474 1203 aa5.57□□□□□ -1.52
RNU6-39P-201ENST00000384344 PWP1Q13610 501 aa5.57□□□□□ -1.52
RNU6-39P-201ENST00000384344 MRPL58Q14197 206 aaKnown RBP5.57□□□□□ -1.52
RNU6-39P-201ENST00000384344 UVSSAQ2YD98 709 aa5.57□□□□□ -1.52
RNU6-39P-201ENST00000384344 MEI1Q5TIA1 1274 aa5.57□□□□□ -1.52
RNU6-39P-201ENST00000384344 PCNX4Q63HM2 1172 aa5.57□□□□□ -1.52
RNU6-39P-201ENST00000384344 SCARA3Q6AZY7 606 aa5.57□□□□□ -1.52
RNU6-39P-201ENST00000384344 TTBK2Q6IQ55 1244 aa5.57□□□□□ -1.52
RNU6-39P-201ENST00000384344 LLGL2Q6P1M3 1020 aa5.57□□□□□ -1.52
RNU6-39P-201ENST00000384344 AGGF1Q8N302 714 aaeCLIP5.57□□□□□ -1.52
RNU6-39P-201ENST00000384344 C12orf50Q8NA57 414 aaPredicted RBP5.57□□□□□ -1.52
RNU6-39P-201ENST00000384344 NRSN2Q9GZP1 204 aa5.57□□□□□ -1.52
RNU6-39P-201ENST00000384344 KRT82Q9NSB4 513 aa5.57□□□□□ -1.52
RNU6-39P-201ENST00000384344 CYP8B1Q9UNU6 501 aa5.57□□□□□ -1.52
RNU6-39P-201ENST00000384344 USP31Q70CQ4 1352 aa5.56□□□□□ -1.52
RNU6-39P-201ENST00000384344 ALX3O95076 343 aa5.56□□□□□ -1.52
RNU6-39P-201ENST00000384344 CELA3AP09093 270 aa5.56□□□□□ -1.52
RNU6-39P-201ENST00000384344 RPS26P62854 115 aaKnown RBP5.56□□□□□ -1.52
RNU6-39P-201ENST00000384344 MAP1SQ66K74 1059 aaPredicted RBP5.56□□□□□ -1.52
RNU6-39P-201ENST00000384344 Q6ZS46 218 aa5.56□□□□□ -1.52
RNU6-39P-201ENST00000384344 TMEM87AQ8NBN3 555 aa5.56□□□□□ -1.52
RNU6-39P-201ENST00000384344 SMG8Q8ND04 991 aaKnown RBP5.56□□□□□ -1.52
RNU6-39P-201ENST00000384344 SPOCK3Q9BQ16 436 aa5.56□□□□□ -1.52
RNU6-39P-201ENST00000384344 YIPF2Q9BWQ6 316 aa5.56□□□□□ -1.52
RNU6-39P-201ENST00000384344 TMPRSS13Q9BYE2 586 aa5.56□□□□□ -1.52
RNU6-39P-201ENST00000384344 ZC3H12CQ9C0D7 883 aaKnown RBP5.56□□□□□ -1.52
RNU6-39P-201ENST00000384344 SUGCTQ9HAC7 445 aa5.56□□□□□ -1.52
RNU6-39P-201ENST00000384344 DHX15O43143 795 aaKnown RBP5.55□□□□□ -1.52
RNU6-39P-201ENST00000384344 CTSHP09668 335 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms