RNA–Protein interactions for RNA: ENST00000384161.1

RNU6-48P-201, Transcript of RNA, U6 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU6-48P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-48P-201ENST00000384161 CCDC39Q9UFE4 941 aa4.84□□□□□ -1.63
RNU6-48P-201ENST00000384161 PPME1Q9Y570 386 aa4.84□□□□□ -1.63
RNU6-48P-201ENST00000384161 PNMA6FA0A0J9YX94 578 aa4.83□□□□□ -1.64
RNU6-48P-201ENST00000384161 P4HBP07237 508 aaKnown RBP4.83□□□□□ -1.64
RNU6-48P-201ENST00000384161 CD68P34810 354 aaPredicted RBP4.83□□□□□ -1.64
RNU6-48P-201ENST00000384161 COL13A1Q5TAT6 717 aaPredicted RBP4.83□□□□□ -1.64
RNU6-48P-201ENST00000384161 KIAA0319Q5VV43 1072 aa4.83□□□□□ -1.64
RNU6-48P-201ENST00000384161 ADAMTSL4Q6UY14 1074 aa4.83□□□□□ -1.64
RNU6-48P-201ENST00000384161 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.83□□□□□ -1.64
RNU6-48P-201ENST00000384161 ACAD11Q709F0 780 aa4.83□□□□□ -1.64
RNU6-48P-201ENST00000384161 NPAS4Q8IUM7 802 aa4.83□□□□□ -1.64
RNU6-48P-201ENST00000384161 DZANK1Q9NVP4 752 aa4.83□□□□□ -1.64
RNU6-48P-201ENST00000384161 PIM2Q9P1W9 311 aa4.83□□□□□ -1.64
RNU6-48P-201ENST00000384161 TRAK1Q9UPV9 953 aa4.83□□□□□ -1.64
RNU6-48P-201ENST00000384161 EIF4EBP3O60516 100 aaPredicted RBP4.82□□□□□ -1.64
RNU6-48P-201ENST00000384161 PRPF40AO75400 957 aaKnown RBP4.82□□□□□ -1.64
RNU6-48P-201ENST00000384161 LDHBP07195 334 aaKnown RBP4.82□□□□□ -1.64
RNU6-48P-201ENST00000384161 JUNBP17275 347 aaPredicted RBP4.82□□□□□ -1.64
RNU6-48P-201ENST00000384161 PTPRAP18433 802 aa4.82□□□□□ -1.64
RNU6-48P-201ENST00000384161 ZNF326Q5BKZ1 582 aaKnown RBP4.82□□□□□ -1.64
RNU6-48P-201ENST00000384161 TMEM102Q8N9M5 508 aaPredicted RBP4.82□□□□□ -1.64
RNU6-48P-201ENST00000384161 OSMRQ99650 979 aa4.82□□□□□ -1.64
RNU6-48P-201ENST00000384161 SRCIN1Q9C0H9 1055 aa4.82□□□□□ -1.64
RNU6-48P-201ENST00000384161 ZFYVE1Q9HBF4 777 aa4.82□□□□□ -1.64
RNU6-48P-201ENST00000384161 PODXL2Q9NZ53 605 aa4.82□□□□□ -1.64
RNU6-48P-201ENST00000384161 A0A1W2PP55 124 aa4.81□□□□□ -1.64
RNU6-48P-201ENST00000384161 DBX1A6NMT0 343 aa4.81□□□□□ -1.64
RNU6-48P-201ENST00000384161 WDR64B1ANS9 1081 aa4.81□□□□□ -1.64
RNU6-48P-201ENST00000384161 LINC01387J3KSC0 135 aa4.81□□□□□ -1.64
RNU6-48P-201ENST00000384161 PDE2AO00408 941 aaPredicted RBP4.81□□□□□ -1.64
RNU6-48P-201ENST00000384161 ADAM11O75078 769 aa4.81□□□□□ -1.64
RNU6-48P-201ENST00000384161 POLR3DP05423 398 aaPredicted RBP4.81□□□□□ -1.64
RNU6-48P-201ENST00000384161 USPL1Q5W0Q7 1092 aa4.81□□□□□ -1.64
RNU6-48P-201ENST00000384161 CEP135Q66GS9 1140 aa4.81□□□□□ -1.64
RNU6-48P-201ENST00000384161 BEND4Q6ZU67 534 aa4.81□□□□□ -1.64
RNU6-48P-201ENST00000384161 FOXD4L4Q8WXT5 416 aaPredicted RBP4.81□□□□□ -1.64
RNU6-48P-201ENST00000384161 NXPE3Q969Y0 559 aa4.81□□□□□ -1.64
RNU6-48P-201ENST00000384161 BHLHE41Q9C0J9 482 aaPredicted RBP4.81□□□□□ -1.64
RNU6-48P-201ENST00000384161 EHD4Q9H223 541 aa4.81□□□□□ -1.64
RNU6-48P-201ENST00000384161 RASSF4Q9H2L5 321 aa4.81□□□□□ -1.64
RNU6-48P-201ENST00000384161 NPHS2Q9NP85 383 aa4.81□□□□□ -1.64
RNU6-48P-201ENST00000384161 SPG7Q9UQ90 795 aa4.81□□□□□ -1.64
RNU6-48P-201ENST00000384161 NFKBIEO00221 500 aa4.8□□□□□ -1.64
RNU6-48P-201ENST00000384161 GADD45BO75293 160 aaPredicted RBP4.8□□□□□ -1.64
RNU6-48P-201ENST00000384161 PAPLNO95428 1278 aa4.8□□□□□ -1.64
RNU6-48P-201ENST00000384161 F13BP05160 661 aa4.8□□□□□ -1.64
RNU6-48P-201ENST00000384161 BMP3P12645 472 aa4.8□□□□□ -1.64
RNU6-48P-201ENST00000384161 XRCC5P13010 732 aaKnown RBP4.8□□□□□ -1.64
RNU6-48P-201ENST00000384161 FOSL1P15407 271 aa4.8□□□□□ -1.64
RNU6-48P-201ENST00000384161 CDC27P30260 824 aa4.8□□□□□ -1.64
RNU6-48P-201ENST00000384161 CABP4P57796 275 aa4.8□□□□□ -1.64
RNU6-48P-201ENST00000384161 PEAR1Q5VY43 1037 aaPredicted RBP4.8□□□□□ -1.64
RNU6-48P-201ENST00000384161 PRPF40BQ6NWY9 871 aaKnown RBP4.8□□□□□ -1.64
RNU6-48P-201ENST00000384161 FBXO33Q7Z6M2 555 aa4.8□□□□□ -1.64
RNU6-48P-201ENST00000384161 CCNJLQ8IV13 435 aa4.8□□□□□ -1.64
RNU6-48P-201ENST00000384161 ZKSCAN3Q9BRR0 538 aa4.8□□□□□ -1.64
RNU6-48P-201ENST00000384161 BCL2L13Q9BXK5 485 aa4.8□□□□□ -1.64
RNU6-48P-201ENST00000384161 ADAM19Q9H013 955 aa4.8□□□□□ -1.64
RNU6-48P-201ENST00000384161 LIN7BQ9HAP6 207 aa4.8□□□□□ -1.64
RNU6-48P-201ENST00000384161 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.8□□□□□ -1.64
RNU6-48P-201ENST00000384161 DDX3YO15523 660 aaKnown RBP4.79□□□□□ -1.64
RNU6-48P-201ENST00000384161 PREPP48147 710 aa4.79□□□□□ -1.64
RNU6-48P-201ENST00000384161 ATP11AP98196 1134 aa4.79□□□□□ -1.64
RNU6-48P-201ENST00000384161 XPCQ01831 940 aaPredicted RBP4.79□□□□□ -1.64
RNU6-48P-201ENST00000384161 PTPN12Q05209 780 aaKnown RBP4.79□□□□□ -1.64
RNU6-48P-201ENST00000384161 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.79□□□□□ -1.64
RNU6-48P-201ENST00000384161 ZNF648Q5T619 568 aaPredicted RBP4.79□□□□□ -1.64
RNU6-48P-201ENST00000384161 KRTAP5-3Q6L8H2 238 aa4.79□□□□□ -1.64
RNU6-48P-201ENST00000384161 FAM117BQ6P1L5 589 aa4.79□□□□□ -1.64
RNU6-48P-201ENST00000384161 SHISA5Q8N114 240 aa4.79□□□□□ -1.64
RNU6-48P-201ENST00000384161 EPS8L3Q8TE67 593 aaKnown RBP4.79□□□□□ -1.64
RNU6-48P-201ENST00000384161 BSNDQ8WZ55 320 aa4.79□□□□□ -1.64
RNU6-48P-201ENST00000384161 FBXL18Q96ME1 805 aa4.79□□□□□ -1.64
RNU6-48P-201ENST00000384161 POP1Q99575 1024 aaKnown RBP4.79□□□□□ -1.64
RNU6-48P-201ENST00000384161 HIF3AQ9Y2N7 669 aa4.79□□□□□ -1.64
RNU6-48P-201ENST00000384161 CARMIL2Q6F5E8 1435 aa4.79□□□□□ -1.64
RNU6-48P-201ENST00000384161 GNA15P30679 374 aa4.78□□□□□ -1.64
RNU6-48P-201ENST00000384161 TXNDC11Q6PKC3 985 aa4.78□□□□□ -1.64
RNU6-48P-201ENST00000384161 VSIG10LQ86VR7 867 aa4.78□□□□□ -1.64
RNU6-48P-201ENST00000384161 UBASH3BQ8TF42 649 aa4.78□□□□□ -1.64
RNU6-48P-201ENST00000384161 WNT8BQ93098 351 aa4.78□□□□□ -1.64
RNU6-48P-201ENST00000384161 MFSD14AQ96MC6 490 aa4.78□□□□□ -1.64
RNU6-48P-201ENST00000384161 TCF12Q99081 682 aa4.78□□□□□ -1.64
RNU6-48P-201ENST00000384161 KRTAP9-3Q9BYQ3 159 aa4.78□□□□□ -1.64
RNU6-48P-201ENST00000384161 BCO2Q9BYV7 579 aa4.78□□□□□ -1.64
RNU6-48P-201ENST00000384161 LATS2Q9NRM7 1088 aa4.78□□□□□ -1.64
RNU6-48P-201ENST00000384161 WWC3Q9ULE0 1092 aa4.78□□□□□ -1.64
RNU6-48P-201ENST00000384161 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.78□□□□□ -1.64
RNU6-48P-201ENST00000384161 A0A096LPE4 126 aa4.77□□□□□ -1.65
RNU6-48P-201ENST00000384161 TMEM238LA0A1B0GVL6 79 aa4.77□□□□□ -1.65
RNU6-48P-201ENST00000384161 A0A1W2PPZ6 126 aa4.77□□□□□ -1.65
RNU6-48P-201ENST00000384161 RBM47A0AV96 593 aaKnown RBP4.77□□□□□ -1.65
RNU6-48P-201ENST00000384161 FSCN2O14926 492 aa4.77□□□□□ -1.65
RNU6-48P-201ENST00000384161 ARL4DP49703 201 aa4.77□□□□□ -1.65
RNU6-48P-201ENST00000384161 GRM2Q14416 872 aa4.77□□□□□ -1.65
RNU6-48P-201ENST00000384161 ZNF124Q15973 351 aa4.77□□□□□ -1.65
RNU6-48P-201ENST00000384161 CPSF6Q16630 551 aaKnown RBP eCLIP4.77□□□□□ -1.65
RNU6-48P-201ENST00000384161 DUOXA2Q1HG44 320 aa4.77□□□□□ -1.65
RNU6-48P-201ENST00000384161 RPS26P11Q5JNZ5 115 aaPredicted RBP4.77□□□□□ -1.65
RNU6-48P-201ENST00000384161 KLHL23Q8NBE8 558 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms