RNA–Protein interactions for RNA: ENST00000381984.2

RFX3-203, Transcript of regulatory factor X3, humanhuman

TSL 3 BASIC

Gene RFX3, Length 364 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-203ENST00000381984 KCNK4Q9NYG8 393 aa4.53□□□□□ -1.68
RFX3-203ENST00000381984 CNTN3Q9P232 1028 aa4.53□□□□□ -1.68
RFX3-203ENST00000381984 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.53□□□□□ -1.68
RFX3-203ENST00000381984 BICRAQ9NZM4 1560 aa4.53□□□□□ -1.69
RFX3-203ENST00000381984 NCANO14594 1321 aa4.52□□□□□ -1.69
RFX3-203ENST00000381984 LINC01387J3KSC0 135 aa4.52□□□□□ -1.69
RFX3-203ENST00000381984 PAPLNO95428 1278 aa4.52□□□□□ -1.69
RFX3-203ENST00000381984 EGFRP00533 1210 aa4.52□□□□□ -1.69
RFX3-203ENST00000381984 PRNPP04156 253 aa4.52□□□□□ -1.69
RFX3-203ENST00000381984 CES1P23141 567 aa4.52□□□□□ -1.69
RFX3-203ENST00000381984 BEND4Q6ZU67 534 aa4.52□□□□□ -1.69
RFX3-203ENST00000381984 GLYCTKQ8IVS8 523 aa4.52□□□□□ -1.69
RFX3-203ENST00000381984 C1orf127Q8N9H9 656 aa4.52□□□□□ -1.69
RFX3-203ENST00000381984 TMC1Q8TDI8 760 aa4.52□□□□□ -1.69
RFX3-203ENST00000381984 ZNF830Q96NB3 372 aaPredicted RBP4.52□□□□□ -1.69
RFX3-203ENST00000381984 RASSF4Q9H2L5 321 aa4.52□□□□□ -1.69
RFX3-203ENST00000381984 CCDC87Q9NVE4 849 aa4.52□□□□□ -1.69
RFX3-203ENST00000381984 CARMIL2Q6F5E8 1435 aa4.52□□□□□ -1.69
RFX3-203ENST00000381984 CECR2Q9BXF3 1484 aa4.51□□□□□ -1.69
RFX3-203ENST00000381984 FAM177BA6PVY3 158 aa4.51□□□□□ -1.69
RFX3-203ENST00000381984 TM4SF5O14894 197 aa4.51□□□□□ -1.69
RFX3-203ENST00000381984 FAM13AO94988 1023 aa4.51□□□□□ -1.69
RFX3-203ENST00000381984 POLR3DP05423 398 aaPredicted RBP4.51□□□□□ -1.69
RFX3-203ENST00000381984 IRX6P78412 446 aaPredicted RBP4.51□□□□□ -1.69
RFX3-203ENST00000381984 FKBP4Q02790 459 aaKnown RBP eCLIP4.51□□□□□ -1.69
RFX3-203ENST00000381984 B4GALNT3Q6L9W6 998 aa4.51□□□□□ -1.69
RFX3-203ENST00000381984 LILRA6Q6PI73 481 aa4.51□□□□□ -1.69
RFX3-203ENST00000381984 KIAA1211Q6ZU35 1233 aa4.51□□□□□ -1.69
RFX3-203ENST00000381984 ACAD11Q709F0 780 aa4.51□□□□□ -1.69
RFX3-203ENST00000381984 OR13H1Q8NG92 308 aa4.51□□□□□ -1.69
RFX3-203ENST00000381984 MFSD14AQ96MC6 490 aa4.51□□□□□ -1.69
RFX3-203ENST00000381984 CARD10Q9BWT7 1032 aa4.51□□□□□ -1.69
RFX3-203ENST00000381984 SH2B1Q9NRF2 756 aaPredicted RBP4.51□□□□□ -1.69
RFX3-203ENST00000381984 FOXD3Q9UJU5 478 aaPredicted RBP4.51□□□□□ -1.69
RFX3-203ENST00000381984 ZCCHC6Q5VYS8 1495 aaKnown RBP4.5□□□□□ -1.69
RFX3-203ENST00000381984 PHACTR2O75167 634 aa4.5□□□□□ -1.69
RFX3-203ENST00000381984 SMNDC1O75940 238 aaKnown RBP eCLIP4.5□□□□□ -1.69
RFX3-203ENST00000381984 BMP3P12645 472 aa4.5□□□□□ -1.69
RFX3-203ENST00000381984 MZF1P28698 734 aaPredicted RBP4.5□□□□□ -1.69
RFX3-203ENST00000381984 BUD31P41223 144 aaPredicted RBP4.5□□□□□ -1.69
RFX3-203ENST00000381984 DMTNQ08495 405 aa4.5□□□□□ -1.69
RFX3-203ENST00000381984 ALKBH2Q6NS38 261 aa4.5□□□□□ -1.69
RFX3-203ENST00000381984 SLC7A3Q8WY07 619 aa4.5□□□□□ -1.69
RFX3-203ENST00000381984 BIN2Q9UBW5 565 aaPredicted RBP4.5□□□□□ -1.69
RFX3-203ENST00000381984 LEMD3Q9Y2U8 911 aa4.5□□□□□ -1.69
RFX3-203ENST00000381984 DHX57Q6P158 1386 aaKnown RBP4.5□□□□□ -1.69
RFX3-203ENST00000381984 B8ZZF3 427 aa4.49□□□□□ -1.69
RFX3-203ENST00000381984 EREGO14944 169 aa4.49□□□□□ -1.69
RFX3-203ENST00000381984 F13BP05160 661 aa4.49□□□□□ -1.69
RFX3-203ENST00000381984 FOSL1P15407 271 aa4.49□□□□□ -1.69
RFX3-203ENST00000381984 CD68P34810 354 aaPredicted RBP4.49□□□□□ -1.69
RFX3-203ENST00000381984 TERF1P54274 439 aa4.49□□□□□ -1.69
RFX3-203ENST00000381984 KRTAP19-4Q3LI73 84 aa4.49□□□□□ -1.69
RFX3-203ENST00000381984 VSIG10LQ86VR7 867 aa4.49□□□□□ -1.69
RFX3-203ENST00000381984 SHISA5Q8N114 240 aa4.49□□□□□ -1.69
RFX3-203ENST00000381984 ASAP3Q8TDY4 903 aa4.49□□□□□ -1.69
RFX3-203ENST00000381984 HHIPQ96QV1 700 aa4.49□□□□□ -1.69
RFX3-203ENST00000381984 KCNF1Q9H3M0 494 aa4.49□□□□□ -1.69
RFX3-203ENST00000381984 USTQ9Y2C2 406 aa4.49□□□□□ -1.69
RFX3-203ENST00000381984 TCERG1O14776 1098 aaKnown RBP4.48□□□□□ -1.69
RFX3-203ENST00000381984 ANP32CO43423 234 aa4.48□□□□□ -1.69
RFX3-203ENST00000381984 FZD6O60353 706 aa4.48□□□□□ -1.69
RFX3-203ENST00000381984 FARP2O94887 1054 aaPredicted RBP4.48□□□□□ -1.69
RFX3-203ENST00000381984 RPLP1P05386 114 aaKnown RBP4.48□□□□□ -1.69
RFX3-203ENST00000381984 SOX18P35713 384 aa4.48□□□□□ -1.69
RFX3-203ENST00000381984 MMP14P50281 582 aa4.48□□□□□ -1.69
RFX3-203ENST00000381984 SF3B2Q13435 895 aaKnown RBP4.48□□□□□ -1.69
RFX3-203ENST00000381984 PDE12Q6L8Q7 609 aaKnown RBP4.48□□□□□ -1.69
RFX3-203ENST00000381984 ADAMTSL4Q6UY14 1074 aa4.48□□□□□ -1.69
RFX3-203ENST00000381984 CILP2Q8IUL8 1156 aa4.48□□□□□ -1.69
RFX3-203ENST00000381984 RGS22Q8NE09 1264 aa4.48□□□□□ -1.69
RFX3-203ENST00000381984 C11orf16Q9NQ32 467 aa4.48□□□□□ -1.69
RFX3-203ENST00000381984 LATS2Q9NRM7 1088 aa4.48□□□□□ -1.69
RFX3-203ENST00000381984 ATG3Q9NT62 314 aa4.48□□□□□ -1.69
RFX3-203ENST00000381984 PPME1Q9Y570 386 aa4.48□□□□□ -1.69
RFX3-203ENST00000381984 CC2D2AQ9P2K1 1620 aa4.47□□□□□ -1.69
RFX3-203ENST00000381984 DDX3YO15523 660 aaKnown RBP4.47□□□□□ -1.69
RFX3-203ENST00000381984 ICMTO60725 284 aa4.47□□□□□ -1.69
RFX3-203ENST00000381984 TNFRSF21O75509 655 aa4.47□□□□□ -1.69
RFX3-203ENST00000381984 KIF20AO95235 890 aa4.47□□□□□ -1.69
RFX3-203ENST00000381984 CDK11BP21127 795 aaKnown RBP4.47□□□□□ -1.69
RFX3-203ENST00000381984 CDC27P30260 824 aa4.47□□□□□ -1.69
RFX3-203ENST00000381984 TAF3Q5VWG9 929 aa4.47□□□□□ -1.69
RFX3-203ENST00000381984 MTERF4Q7Z6M4 381 aaKnown RBP4.47□□□□□ -1.69
RFX3-203ENST00000381984 ANP32BQ92688 251 aaKnown RBP4.47□□□□□ -1.69
RFX3-203ENST00000381984 POP1Q99575 1024 aaKnown RBP4.47□□□□□ -1.69
RFX3-203ENST00000381984 OSMRQ99650 979 aa4.47□□□□□ -1.69
RFX3-203ENST00000381984 PBX4Q9BYU1 374 aa4.47□□□□□ -1.69
RFX3-203ENST00000381984 GTPBP4Q9BZE4 634 aaKnown RBP4.47□□□□□ -1.69
RFX3-203ENST00000381984 PAK6Q9NQU5 681 aaPredicted RBP4.47□□□□□ -1.69
RFX3-203ENST00000381984 RNF123Q5XPI4 1314 aa4.46□□□□□ -1.69
RFX3-203ENST00000381984 PTPRAP18433 802 aa4.46□□□□□ -1.7
RFX3-203ENST00000381984 EPHA1P21709 976 aa4.46□□□□□ -1.7
RFX3-203ENST00000381984 TNNT2P45379 298 aaPredicted RBP4.46□□□□□ -1.7
RFX3-203ENST00000381984 PREPP48147 710 aa4.46□□□□□ -1.7
RFX3-203ENST00000381984 DDX10Q13206 875 aaKnown RBP4.46□□□□□ -1.7
RFX3-203ENST00000381984 PKN1Q16512 942 aa4.46□□□□□ -1.7
RFX3-203ENST00000381984 DUOXA2Q1HG44 320 aa4.46□□□□□ -1.7
RFX3-203ENST00000381984 FAM117BQ6P1L5 589 aa4.46□□□□□ -1.7
RFX3-203ENST00000381984 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 299.5 ms