RNA–Protein interactions for RNA: ENST00000381254.6

GEN1-202, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GEN1, Length 6,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-202ENST00000381254 MICALL2Q8IY33 904 aa6.4□□□□□ -1.38
GEN1-202ENST00000381254 DEF6Q9H4E7 631 aa6.4□□□□□ -1.38
GEN1-202ENST00000381254 TAF1DQ9H5J8 278 aaPredicted RBP6.4□□□□□ -1.38
GEN1-202ENST00000381254 USP25Q9UHP3 1055 aa6.4□□□□□ -1.38
GEN1-202ENST00000381254 F8W031 263 aaPredicted RBP6.4□□□□□ -1.38
GEN1-202ENST00000381254 RNMTO43148 476 aaKnown RBP6.4□□□□□ -1.38
GEN1-202ENST00000381254 USP17L8P0C7I0 530 aa6.4□□□□□ -1.38
GEN1-202ENST00000381254 NBPF20Q3BBV1 942 aa6.4□□□□□ -1.38
GEN1-202ENST00000381254 KIF23Q02241 960 aaPredicted RBP6.4□□□□□ -1.39
GEN1-202ENST00000381254 LARP1BQ659C4 914 aaKnown RBP6.4□□□□□ -1.39
GEN1-202ENST00000381254 HELBQ8NG08 1087 aaPredicted RBP6.4□□□□□ -1.39
GEN1-202ENST00000381254 KIF18AQ8NI77 898 aa6.4□□□□□ -1.39
GEN1-202ENST00000381254 CCDC12Q8WUD4 166 aaPredicted RBP6.4□□□□□ -1.39
GEN1-202ENST00000381254 EVI5LQ96CN4 794 aa6.4□□□□□ -1.39
GEN1-202ENST00000381254 MBIPQ9NS73 344 aa6.4□□□□□ -1.39
GEN1-202ENST00000381254 CALCOCO1Q9P1Z2 691 aa6.4□□□□□ -1.39
GEN1-202ENST00000381254 EMILIN1Q9Y6C2 1016 aa6.4□□□□□ -1.39
GEN1-202ENST00000381254 KIF28PB7ZC32 967 aa6.4□□□□□ -1.39
GEN1-202ENST00000381254 KBTBD13C9JR72 458 aa6.4□□□□□ -1.39
GEN1-202ENST00000381254 BRPF1P55201 1214 aaPredicted RBP6.4□□□□□ -1.39
GEN1-202ENST00000381254 SLC39A6Q13433 755 aa6.4□□□□□ -1.39
GEN1-202ENST00000381254 PPP2R3CQ969Q6 453 aa6.4□□□□□ -1.39
GEN1-202ENST00000381254 RTN4Q9NQC3 1192 aaKnown RBP6.4□□□□□ -1.39
GEN1-202ENST00000381254 PRDM5Q9NQX1 630 aaPredicted RBP6.4□□□□□ -1.39
GEN1-202ENST00000381254 LRRIQ1Q96JM4 1722 aa6.39□□□□□ -1.39
GEN1-202ENST00000381254 CLTCL1P53675 1640 aa6.39□□□□□ -1.39
GEN1-202ENST00000381254 COL15A1P39059 1388 aa6.39□□□□□ -1.39
GEN1-202ENST00000381254 SAMD7Q7Z3H4 446 aa6.39□□□□□ -1.39
GEN1-202ENST00000381254 GPHNQ9NQX3 736 aaPredicted RBP6.39□□□□□ -1.39
GEN1-202ENST00000381254 PDRG1Q9NUG6 133 aa6.39□□□□□ -1.39
GEN1-202ENST00000381254 NOB1Q9ULX3 412 aaKnown RBP6.39□□□□□ -1.39
GEN1-202ENST00000381254 GOLGA6L10A6NI86 522 aa6.39□□□□□ -1.39
GEN1-202ENST00000381254 SFPQP23246 707 aaKnown RBP eCLIP6.39□□□□□ -1.39
GEN1-202ENST00000381254 HOOK3Q86VS8 718 aa6.39□□□□□ -1.39
GEN1-202ENST00000381254 PARK7Q99497 189 aaKnown RBP6.39□□□□□ -1.39
GEN1-202ENST00000381254 SH3TC1Q8TE82 1336 aa6.39□□□□□ -1.39
GEN1-202ENST00000381254 TLR3O15455 904 aaKnown RBP6.39□□□□□ -1.39
GEN1-202ENST00000381254 SLC4A2P04920 1241 aa6.39□□□□□ -1.39
GEN1-202ENST00000381254 DESP17661 470 aa6.39□□□□□ -1.39
GEN1-202ENST00000381254 GMPSP49915 693 aaPredicted RBP6.39□□□□□ -1.39
GEN1-202ENST00000381254 UBE2HP62256 183 aa6.39□□□□□ -1.39
GEN1-202ENST00000381254 NFIXQ14938 502 aa6.39□□□□□ -1.39
GEN1-202ENST00000381254 VPS36Q86VN1 386 aa6.39□□□□□ -1.39
GEN1-202ENST00000381254 SPRYD3Q8NCJ5 442 aa6.39□□□□□ -1.39
GEN1-202ENST00000381254 SPATA32Q96LK8 384 aa6.39□□□□□ -1.39
GEN1-202ENST00000381254 ECHDC1Q9NTX5 307 aa6.39□□□□□ -1.39
GEN1-202ENST00000381254 TULP1O00294 542 aaPredicted RBP6.38□□□□□ -1.39
GEN1-202ENST00000381254 CETPP11597 493 aa6.38□□□□□ -1.39
GEN1-202ENST00000381254 GTF2A2P52657 109 aa6.38□□□□□ -1.39
GEN1-202ENST00000381254 MICALCLQ6ZW33 695 aa6.38□□□□□ -1.39
GEN1-202ENST00000381254 FAM114A1Q8IWE2 563 aa6.38□□□□□ -1.39
GEN1-202ENST00000381254 VSIG10Q8N0Z9 540 aa6.38□□□□□ -1.39
GEN1-202ENST00000381254 CNPY4Q8N129 248 aa6.38□□□□□ -1.39
GEN1-202ENST00000381254 DLL1O00548 723 aa6.38□□□□□ -1.39
GEN1-202ENST00000381254 IFIT5Q13325 482 aaKnown RBP6.38□□□□□ -1.39
GEN1-202ENST00000381254 COL13A1Q5TAT6 717 aaPredicted RBP6.38□□□□□ -1.39
GEN1-202ENST00000381254 ZNF697Q5TEC3 545 aa6.38□□□□□ -1.39
GEN1-202ENST00000381254 CTR9Q6PD62 1173 aa6.38□□□□□ -1.39
GEN1-202ENST00000381254 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.38□□□□□ -1.39
GEN1-202ENST00000381254 CROCCP2Q86T23 111 aa6.38□□□□□ -1.39
GEN1-202ENST00000381254 LINC00116Q8NCU8 138 aa6.38□□□□□ -1.39
GEN1-202ENST00000381254 UBXN4Q92575 508 aa6.38□□□□□ -1.39
GEN1-202ENST00000381254 FOXN1O15353 648 aa6.38□□□□□ -1.39
GEN1-202ENST00000381254 PTGER2P43116 358 aa6.38□□□□□ -1.39
GEN1-202ENST00000381254 ANKRD44Q8N8A2 993 aa6.38□□□□□ -1.39
GEN1-202ENST00000381254 NAP1L4Q99733 375 aaKnown RBP6.38□□□□□ -1.39
GEN1-202ENST00000381254 UPF3BQ9BZI7 483 aaKnown RBP6.38□□□□□ -1.39
GEN1-202ENST00000381254 BSDC1Q9NW68 430 aaPredicted RBP6.38□□□□□ -1.39
GEN1-202ENST00000381254 USP17L3A6NCW0 530 aa6.38□□□□□ -1.39
GEN1-202ENST00000381254 USP17L4A6NCW7 530 aa6.38□□□□□ -1.39
GEN1-202ENST00000381254 TNPO2O14787 897 aaKnown RBP6.38□□□□□ -1.39
GEN1-202ENST00000381254 UQCRFS1P1P0C7P4 283 aa6.38□□□□□ -1.39
GEN1-202ENST00000381254 USP17L1Q7RTZ2 530 aa6.38□□□□□ -1.39
GEN1-202ENST00000381254 MICALL1Q8N3F8 863 aa6.38□□□□□ -1.39
GEN1-202ENST00000381254 CTAGE1Q96RT6 745 aa6.38□□□□□ -1.39
GEN1-202ENST00000381254 INCENPQ9NQS7 918 aa6.38□□□□□ -1.39
GEN1-202ENST00000381254 CWC25Q9NXE8 425 aaPredicted RBP6.38□□□□□ -1.39
GEN1-202ENST00000381254 A0A1W2PP64 1363 aa6.38□□□□□ -1.39
GEN1-202ENST00000381254 V9GYY5 206 aaPredicted RBP6.38□□□□□ -1.39
GEN1-202ENST00000381254 PRPF40AO75400 957 aaKnown RBP6.37□□□□□ -1.39
GEN1-202ENST00000381254 SLC5A1P13866 664 aa6.37□□□□□ -1.39
GEN1-202ENST00000381254 GNAQP50148 359 aa6.37□□□□□ -1.39
GEN1-202ENST00000381254 AMER1Q5JTC6 1135 aaPredicted RBP6.37□□□□□ -1.39
GEN1-202ENST00000381254 WWC2Q6AWC2 1192 aa6.37□□□□□ -1.39
GEN1-202ENST00000381254 FBXO46Q6PJ61 603 aaPredicted RBP6.37□□□□□ -1.39
GEN1-202ENST00000381254 CCDC148Q8NFR7 591 aa6.37□□□□□ -1.39
GEN1-202ENST00000381254 NAA15Q9BXJ9 866 aaKnown RBP6.37□□□□□ -1.39
GEN1-202ENST00000381254 MSRAQ9UJ68 235 aa6.37□□□□□ -1.39
GEN1-202ENST00000381254 PRR36Q9H6K5 1346 aa6.37□□□□□ -1.39
GEN1-202ENST00000381254 AOC3Q16853 763 aa6.37□□□□□ -1.39
GEN1-202ENST00000381254 NECAB2Q7Z6G3 386 aa6.37□□□□□ -1.39
GEN1-202ENST00000381254 TRMT44Q8IYL2 757 aaKnown RBP6.37□□□□□ -1.39
GEN1-202ENST00000381254 ZNF397Q8NF99 534 aaPredicted RBP6.37□□□□□ -1.39
GEN1-202ENST00000381254 HMGB1P1B2RPK0 211 aaPredicted RBP6.37□□□□□ -1.39
GEN1-202ENST00000381254 EIF4E1BA6NMX2 242 aaKnown RBP6.37□□□□□ -1.39
GEN1-202ENST00000381254 CCDC172P0C7W6 258 aa6.37□□□□□ -1.39
GEN1-202ENST00000381254 SNAPC2Q13487 334 aa6.37□□□□□ -1.39
GEN1-202ENST00000381254 VPS53Q5VIR6 699 aa6.37□□□□□ -1.39
GEN1-202ENST00000381254 UBE2OQ9C0C9 1292 aaKnown RBP6.37□□□□□ -1.39
GEN1-202ENST00000381254 RMND1Q9NWS8 449 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms