RNA–Protein interactions for RNA: ENST00000381029.4

VCX3B-201, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-201ENST00000381029 CST9Q5W186 159 aa18.19■□□□□ 0.5
VCX3B-201ENST00000381029 CDC37L1Q7L3B6 337 aa18.19■□□□□ 0.5
VCX3B-201ENST00000381029 AACSQ86V21 672 aa18.19■□□□□ 0.5
VCX3B-201ENST00000381029 SPATA5Q8NB90 893 aa18.19■□□□□ 0.5
VCX3B-201ENST00000381029 POLR2AP24928 1970 aaKnown RBP18.19■□□□□ 0.5
VCX3B-201ENST00000381029 CRKP46108 304 aa18.18■□□□□ 0.5
VCX3B-201ENST00000381029 DLGAP5Q15398 846 aa18.18■□□□□ 0.5
VCX3B-201ENST00000381029 APOBEC3HQ6NTF7 200 aaKnown RBP18.18■□□□□ 0.5
VCX3B-201ENST00000381029 KRT26Q7Z3Y9 468 aa18.18■□□□□ 0.5
VCX3B-201ENST00000381029 USP48Q86UV5 1035 aa18.18■□□□□ 0.5
VCX3B-201ENST00000381029 ADM5C9JUS6 153 aa18.17■□□□□ 0.5
VCX3B-201ENST00000381029 APBB1O00213 710 aa18.17■□□□□ 0.5
VCX3B-201ENST00000381029 HTRA3P83110 453 aa18.17■□□□□ 0.5
VCX3B-201ENST00000381029 GORABQ5T7V8 394 aa18.17■□□□□ 0.5
VCX3B-201ENST00000381029 HHIPL2Q6UWX4 724 aa18.17■□□□□ 0.5
VCX3B-201ENST00000381029 CLASRPQ8N2M8 674 aaKnown RBP18.17■□□□□ 0.5
VCX3B-201ENST00000381029 ZDHHC15Q96MV8 337 aa18.17■□□□□ 0.5
VCX3B-201ENST00000381029 LRRCC1Q9C099 1032 aa18.17■□□□□ 0.5
VCX3B-201ENST00000381029 SMARCA5O60264 1052 aaPredicted RBP18.16■□□□□ 0.5
VCX3B-201ENST00000381029 CYP2E1P05181 493 aaPredicted RBP18.16■□□□□ 0.5
VCX3B-201ENST00000381029 CCDC158Q5M9N0 1113 aa18.16■□□□□ 0.5
VCX3B-201ENST00000381029 DNAJC5GQ8N7S2 189 aa18.16■□□□□ 0.5
VCX3B-201ENST00000381029 DCPSQ96C86 337 aaKnown RBP18.16■□□□□ 0.5
VCX3B-201ENST00000381029 SCAF8Q9UPN6 1271 aaKnown RBP18.16■□□□□ 0.5
VCX3B-201ENST00000381029 LDHBP07195 334 aaKnown RBP18.15■□□□□ 0.5
VCX3B-201ENST00000381029 DIXDC1Q155Q3 683 aa18.15■□□□□ 0.5
VCX3B-201ENST00000381029 SPDYE2Q495Y8 402 aa18.15■□□□□ 0.5
VCX3B-201ENST00000381029 TTC39AQ5SRH9 613 aa18.15■□□□□ 0.5
VCX3B-201ENST00000381029 TBC1D9Q6ZT07 1266 aa18.15■□□□□ 0.5
VCX3B-201ENST00000381029 DAGLAQ9Y4D2 1042 aa18.15■□□□□ 0.5
VCX3B-201ENST00000381029 GAKO14976 1311 aa18.15■□□□□ 0.5
VCX3B-201ENST00000381029 MAST3O60307 1309 aa18.15■□□□□ 0.5
VCX3B-201ENST00000381029 ECM29Q5VYK3 1845 aa18.14■□□□□ 0.5
VCX3B-201ENST00000381029 ZGPATQ8N5A5 531 aaKnown RBP18.14■□□□□ 0.49
VCX3B-201ENST00000381029 TEKT1Q969V4 418 aa18.14■□□□□ 0.49
VCX3B-201ENST00000381029 FAM163AQ96GL9 167 aaPredicted RBP18.14■□□□□ 0.49
VCX3B-201ENST00000381029 SNRKQ9NRH2 765 aa18.14■□□□□ 0.49
VCX3B-201ENST00000381029 CREBZFQ9NS37 354 aa18.14■□□□□ 0.49
VCX3B-201ENST00000381029 CLRN2A0PK11 232 aa18.13■□□□□ 0.49
VCX3B-201ENST00000381029 TMEM88BA6NKF7 163 aa18.13■□□□□ 0.49
VCX3B-201ENST00000381029 ZAP70P43403 619 aa18.13■□□□□ 0.49
VCX3B-201ENST00000381029 IRX6P78412 446 aaPredicted RBP18.13■□□□□ 0.49
VCX3B-201ENST00000381029 SULF1Q8IWU6 871 aa18.13■□□□□ 0.49
VCX3B-201ENST00000381029 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.13■□□□□ 0.49
VCX3B-201ENST00000381029 NSUN4Q96CB9 384 aaKnown RBP18.13■□□□□ 0.49
VCX3B-201ENST00000381029 TDRD3Q9H7E2 651 aaKnown RBP18.13■□□□□ 0.49
VCX3B-201ENST00000381029 ZNF70Q9UC06 446 aaPredicted RBP18.13■□□□□ 0.49
VCX3B-201ENST00000381029 TRPM7Q96QT4 1865 aa18.13■□□□□ 0.49
VCX3B-201ENST00000381029 IGHDP01880 384 aa18.12■□□□□ 0.49
VCX3B-201ENST00000381029 MECOMQ03112 1051 aa18.12■□□□□ 0.49
VCX3B-201ENST00000381029 APOBEC3FQ8IUX4 373 aaKnown RBP18.12■□□□□ 0.49
VCX3B-201ENST00000381029 SMC5Q8IY18 1101 aa18.12■□□□□ 0.49
VCX3B-201ENST00000381029 CDCA5Q96FF9 252 aa18.12■□□□□ 0.49
VCX3B-201ENST00000381029 PIH1D3Q9NQM4 214 aaKnown RBP18.12■□□□□ 0.49
VCX3B-201ENST00000381029 NDUFB9Q9Y6M9 179 aa18.12■□□□□ 0.49
VCX3B-201ENST00000381029 SALL3Q9BXA9 1300 aa18.12■□□□□ 0.49
VCX3B-201ENST00000381029 CELF2O95319 508 aaKnown RBP18.11■□□□□ 0.49
VCX3B-201ENST00000381029 IFIT2P09913 472 aaKnown RBP18.11■□□□□ 0.49
VCX3B-201ENST00000381029 RBM5P52756 815 aaKnown RBP eCLIP18.11■□□□□ 0.49
VCX3B-201ENST00000381029 SPTY2D1Q68D10 685 aaPredicted RBP18.11■□□□□ 0.49
VCX3B-201ENST00000381029 ANTXR1Q9H6X2 564 aa18.11■□□□□ 0.49
VCX3B-201ENST00000381029 ABCF2Q9UG63 623 aa18.11■□□□□ 0.49
VCX3B-201ENST00000381029 RFX7Q2KHR2 1363 aa18.11■□□□□ 0.49
VCX3B-201ENST00000381029 SSC5DA1L4H1 1573 aa18.11■□□□□ 0.49
VCX3B-201ENST00000381029 CNTNAP1P78357 1384 aa18.1■□□□□ 0.49
VCX3B-201ENST00000381029 ATP5JP18859 108 aa18.1■□□□□ 0.49
VCX3B-201ENST00000381029 ERICH6Q7L0X2 663 aa18.1■□□□□ 0.49
VCX3B-201ENST00000381029 GCC1Q96CN9 775 aa18.1■□□□□ 0.49
VCX3B-201ENST00000381029 TEPSINQ96N21 525 aa18.1■□□□□ 0.49
VCX3B-201ENST00000381029 DEFB129Q9H1M3 183 aa18.1■□□□□ 0.49
VCX3B-201ENST00000381029 TLL2Q9Y6L7 1015 aa18.1■□□□□ 0.49
VCX3B-201ENST00000381029 MROH7-TTC4A0A0A0MT08 1334 aa18.09■□□□□ 0.49
VCX3B-201ENST00000381029 RASSF10A6NK89 507 aa18.09■□□□□ 0.49
VCX3B-201ENST00000381029 IGSF3O75054 1194 aa18.09■□□□□ 0.49
VCX3B-201ENST00000381029 FKBP1CQ5VVH2 108 aa18.09■□□□□ 0.49
VCX3B-201ENST00000381029 PRAMEF18Q5VWM3 479 aa18.09■□□□□ 0.49
VCX3B-201ENST00000381029 CDC42EP5Q6NZY7 148 aa18.09■□□□□ 0.49
VCX3B-201ENST00000381029 OTUD7AQ8TE49 926 aaPredicted RBP18.09■□□□□ 0.49
VCX3B-201ENST00000381029 MYO5AQ9Y4I1 1855 aaKnown RBP18.08■□□□□ 0.49
VCX3B-201ENST00000381029 DOCK2Q92608 1830 aa18.08■□□□□ 0.48
VCX3B-201ENST00000381029 GPR75-ASB3A0A0A6YYF3 556 aa18.08■□□□□ 0.48
VCX3B-201ENST00000381029 MYO1BO43795 1136 aa18.08■□□□□ 0.48
VCX3B-201ENST00000381029 RHBDL3P58872 404 aa18.08■□□□□ 0.48
VCX3B-201ENST00000381029 RASA3Q14644 834 aa18.08■□□□□ 0.48
VCX3B-201ENST00000381029 SAPCD2Q86UD0 394 aa18.08■□□□□ 0.48
VCX3B-201ENST00000381029 CDAN1Q8IWY9 1227 aa18.08■□□□□ 0.48
VCX3B-201ENST00000381029 PPP2R3BQ9Y5P8 575 aa18.08■□□□□ 0.48
VCX3B-201ENST00000381029 MYH2Q9UKX2 1941 aa18.08■□□□□ 0.48
VCX3B-201ENST00000381029 CACNB3P54284 484 aa18.07■□□□□ 0.48
VCX3B-201ENST00000381029 ADGRA1Q86SQ6 560 aa18.07■□□□□ 0.48
VCX3B-201ENST00000381029 DZIP1Q86YF9 867 aaKnown RBP18.07■□□□□ 0.48
VCX3B-201ENST00000381029 HAUS7Q99871 368 aa18.07■□□□□ 0.48
VCX3B-201ENST00000381029 VEZTQ9HBM0 779 aa18.07■□□□□ 0.48
VCX3B-201ENST00000381029 MAST2Q6P0Q8 1798 aa18.07■□□□□ 0.48
VCX3B-201ENST00000381029 NFIAQ12857 509 aa18.06■□□□□ 0.48
VCX3B-201ENST00000381029 FAM83AQ86UY5 434 aa18.06■□□□□ 0.48
VCX3B-201ENST00000381029 EDC3Q96F86 508 aaKnown RBP18.06■□□□□ 0.48
VCX3B-201ENST00000381029 HHIPL1Q96JK4 782 aa18.06■□□□□ 0.48
VCX3B-201ENST00000381029 RWDD1Q9H446 243 aaPredicted RBP18.06■□□□□ 0.48
VCX3B-201ENST00000381029 GBA2Q9HCG7 927 aaPredicted RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms