RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 TBCAO75347 108 aaKnown RBP12.11□□□□□ -0.47
CLCN4-202ENST00000380833 LMOD1P29536 600 aaPredicted RBP12.11□□□□□ -0.47
CLCN4-202ENST00000380833 TTC36A6NLP5 189 aa12.1□□□□□ -0.47
CLCN4-202ENST00000380833 BLVRAP53004 296 aa12.1□□□□□ -0.47
CLCN4-202ENST00000380833 EIF6P56537 245 aaKnown RBP12.1□□□□□ -0.47
CLCN4-202ENST00000380833 RAB11FIP3O75154 756 aa12.1□□□□□ -0.47
CLCN4-202ENST00000380833 MPHOSPH6Q99547 160 aaKnown RBP12.1□□□□□ -0.47
CLCN4-202ENST00000380833 HMGXB3Q12766 1538 aa12.1□□□□□ -0.47
CLCN4-202ENST00000380833 BAG3O95817 575 aa12.1□□□□□ -0.47
CLCN4-202ENST00000380833 CCDC170Q8IYT3 715 aa12.1□□□□□ -0.47
CLCN4-202ENST00000380833 KCNH5Q8NCM2 988 aa12.1□□□□□ -0.47
CLCN4-202ENST00000380833 TCEANC2Q96MN5 208 aa12.1□□□□□ -0.47
CLCN4-202ENST00000380833 LCA5Q86VQ0 697 aa12.1□□□□□ -0.47
CLCN4-202ENST00000380833 ARHGAP24Q8N264 748 aa12.1□□□□□ -0.47
CLCN4-202ENST00000380833 SMC1BQ8NDV3 1235 aa12.1□□□□□ -0.47
CLCN4-202ENST00000380833 CLSTN2Q9H4D0 955 aa12.1□□□□□ -0.47
CLCN4-202ENST00000380833 CYP7A1P22680 504 aa12.1□□□□□ -0.47
CLCN4-202ENST00000380833 RHOXF2BP0C7M4 288 aa12.1□□□□□ -0.47
CLCN4-202ENST00000380833 ZNF131P52739 623 aa12.1□□□□□ -0.47
CLCN4-202ENST00000380833 CFAP58Q5T655 872 aa12.1□□□□□ -0.47
CLCN4-202ENST00000380833 MFSD6Q6ZSS7 791 aa12.1□□□□□ -0.47
CLCN4-202ENST00000380833 MIGA1Q8NAN2 632 aa12.1□□□□□ -0.47
CLCN4-202ENST00000380833 SEPT8Q92599 483 aa12.1□□□□□ -0.47
CLCN4-202ENST00000380833 CDC5LQ99459 802 aaKnown RBP12.1□□□□□ -0.47
CLCN4-202ENST00000380833 RHOXF2Q9BQY4 288 aa12.1□□□□□ -0.47
CLCN4-202ENST00000380833 IQCGQ9H095 443 aaKnown RBP12.1□□□□□ -0.47
CLCN4-202ENST00000380833 UTP6Q9NYH9 597 aaKnown RBP12.1□□□□□ -0.47
CLCN4-202ENST00000380833 PHF8Q9UPP1 1060 aa12.1□□□□□ -0.47
CLCN4-202ENST00000380833 FAN1Q9Y2M0 1017 aa12.1□□□□□ -0.47
CLCN4-202ENST00000380833 PARP3Q9Y6F1 533 aa12.1□□□□□ -0.47
CLCN4-202ENST00000380833 SPECC1L-ADORA2AF8WAN1 911 aa12.09□□□□□ -0.47
CLCN4-202ENST00000380833 PTGS1P23219 599 aa12.09□□□□□ -0.47
CLCN4-202ENST00000380833 KRT32Q14532 448 aa12.09□□□□□ -0.47
CLCN4-202ENST00000380833 UBE2HP62256 183 aa12.09□□□□□ -0.47
CLCN4-202ENST00000380833 PDE4BQ07343 736 aa12.09□□□□□ -0.47
CLCN4-202ENST00000380833 KIF5AQ12840 1032 aa12.09□□□□□ -0.47
CLCN4-202ENST00000380833 RASA3Q14644 834 aa12.09□□□□□ -0.47
CLCN4-202ENST00000380833 PHLDB3Q6NSJ2 640 aa12.09□□□□□ -0.47
CLCN4-202ENST00000380833 NOP9Q86U38 636 aaKnown RBP12.09□□□□□ -0.47
CLCN4-202ENST00000380833 KIF1BPQ96EK5 621 aa12.09□□□□□ -0.47
CLCN4-202ENST00000380833 PPP1R9AQ9ULJ8 1098 aa12.09□□□□□ -0.47
CLCN4-202ENST00000380833 MYOM3Q5VTT5 1437 aa12.09□□□□□ -0.47
CLCN4-202ENST00000380833 GPIHBP1Q8IV16 184 aa12.09□□□□□ -0.47
CLCN4-202ENST00000380833 USP16Q9Y5T5 823 aa12.09□□□□□ -0.47
CLCN4-202ENST00000380833 STX6O43752 255 aa12.09□□□□□ -0.47
CLCN4-202ENST00000380833 MGEA5O60502 916 aa12.09□□□□□ -0.47
CLCN4-202ENST00000380833 RAB3GAP1Q15042 981 aa12.09□□□□□ -0.47
CLCN4-202ENST00000380833 CHST3Q7LGC8 479 aa12.09□□□□□ -0.47
CLCN4-202ENST00000380833 TCP11L1Q9NUJ3 509 aa12.09□□□□□ -0.47
CLCN4-202ENST00000380833 NIP7Q9Y221 180 aaKnown RBP eCLIP12.09□□□□□ -0.47
CLCN4-202ENST00000380833 PRIM1P49642 420 aaKnown RBP12.09□□□□□ -0.47
CLCN4-202ENST00000380833 PPP2R5DQ14738 602 aa12.09□□□□□ -0.47
CLCN4-202ENST00000380833 FSIP1Q8NA03 581 aa12.09□□□□□ -0.47
CLCN4-202ENST00000380833 SMARCC2Q8TAQ2 1214 aa12.09□□□□□ -0.47
CLCN4-202ENST00000380833 FAM210AQ96ND0 272 aa12.09□□□□□ -0.47
CLCN4-202ENST00000380833 NSFL1CQ9UNZ2 370 aaKnown RBP12.09□□□□□ -0.47
CLCN4-202ENST00000380833 TXNDC9O14530 226 aa12.08□□□□□ -0.48
CLCN4-202ENST00000380833 PPP1R42Q7Z4L9 355 aa12.08□□□□□ -0.48
CLCN4-202ENST00000380833 JDP2Q8WYK2 163 aa12.08□□□□□ -0.48
CLCN4-202ENST00000380833 SPDL1Q96EA4 605 aa12.08□□□□□ -0.48
CLCN4-202ENST00000380833 CETN1Q12798 172 aa12.08□□□□□ -0.48
CLCN4-202ENST00000380833 TRAF1Q13077 416 aa12.08□□□□□ -0.48
CLCN4-202ENST00000380833 MAEAQ7L5Y9 396 aa12.08□□□□□ -0.48
CLCN4-202ENST00000380833 CXorf38Q8TB03 319 aa12.08□□□□□ -0.48
CLCN4-202ENST00000380833 ARHGEF2Q92974 986 aaKnown RBP12.08□□□□□ -0.48
CLCN4-202ENST00000380833 RABEP2Q9H5N1 569 aa12.08□□□□□ -0.48
CLCN4-202ENST00000380833 SLC4A4Q9Y6R1 1079 aa12.08□□□□□ -0.48
CLCN4-202ENST00000380833 TEX14Q8IWB6 1497 aa12.08□□□□□ -0.48
CLCN4-202ENST00000380833 TPD52L2O43399 206 aaKnown RBP12.08□□□□□ -0.48
CLCN4-202ENST00000380833 HSPA2P54652 639 aa12.08□□□□□ -0.48
CLCN4-202ENST00000380833 FAM200AQ8TCP9 573 aa12.08□□□□□ -0.48
CLCN4-202ENST00000380833 PPP1R12AO14974 1030 aaPredicted RBP12.08□□□□□ -0.48
CLCN4-202ENST00000380833 ACTN2P35609 894 aa12.08□□□□□ -0.48
CLCN4-202ENST00000380833 TUBB2AQ13885 445 aa12.08□□□□□ -0.48
CLCN4-202ENST00000380833 NFE2L2Q16236 605 aa12.08□□□□□ -0.48
CLCN4-202ENST00000380833 GRAMD4Q6IC98 578 aa12.08□□□□□ -0.48
CLCN4-202ENST00000380833 GSTA5Q7RTV2 222 aa12.08□□□□□ -0.48
CLCN4-202ENST00000380833 TUBB2BQ9BVA1 445 aa12.08□□□□□ -0.48
CLCN4-202ENST00000380833 NSD3Q9BZ95 1437 aa12.08□□□□□ -0.48
CLCN4-202ENST00000380833 KCNA4P22459 653 aa12.08□□□□□ -0.48
CLCN4-202ENST00000380833 ATP2A3Q93084 1043 aa12.08□□□□□ -0.48
CLCN4-202ENST00000380833 SCOCQ9UIL1 159 aa12.08□□□□□ -0.48
CLCN4-202ENST00000380833 VAV2P52735 878 aa12.07□□□□□ -0.48
CLCN4-202ENST00000380833 HNRNPCP07910 306 aaKnown RBP eCLIP12.07□□□□□ -0.48
CLCN4-202ENST00000380833 TMPOP42166 694 aaKnown RBP12.07□□□□□ -0.48
CLCN4-202ENST00000380833 MRRFQ96E11 262 aaKnown RBP12.07□□□□□ -0.48
CLCN4-202ENST00000380833 HAUS7Q99871 368 aa12.07□□□□□ -0.48
CLCN4-202ENST00000380833 NUF2Q9BZD4 464 aa12.07□□□□□ -0.48
CLCN4-202ENST00000380833 MYO1CO00159 1063 aa12.07□□□□□ -0.48
CLCN4-202ENST00000380833 BACH1O14867 736 aa12.07□□□□□ -0.48
CLCN4-202ENST00000380833 METAP2P50579 478 aaKnown RBP eCLIP12.07□□□□□ -0.48
CLCN4-202ENST00000380833 GJC2Q5T442 439 aaPredicted RBP12.07□□□□□ -0.48
CLCN4-202ENST00000380833 ZCRB1Q8TBF4 217 aaKnown RBP12.07□□□□□ -0.48
CLCN4-202ENST00000380833 ANO3Q9BYT9 981 aa12.07□□□□□ -0.48
CLCN4-202ENST00000380833 SCINQ9Y6U3 715 aa12.07□□□□□ -0.48
CLCN4-202ENST00000380833 SERPINI2O75830 405 aa12.07□□□□□ -0.48
CLCN4-202ENST00000380833 ANKRD24Q8TF21 1146 aa12.07□□□□□ -0.48
CLCN4-202ENST00000380833 PLEKHH2Q8IVE3 1493 aa12.07□□□□□ -0.48
CLCN4-202ENST00000380833 MCUR1Q96AQ8 359 aa12.07□□□□□ -0.48
CLCN4-202ENST00000380833 RXRAP19793 462 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms