RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 FERMT3Q86UX7 667 aa16.79■□□□□ 0.28
CLCN4-201ENST00000380829 MAGEB6Q8N7X4 407 aa16.79■□□□□ 0.28
CLCN4-201ENST00000380829 CELF1Q92879 486 aaKnown RBP16.79■□□□□ 0.28
CLCN4-201ENST00000380829 CCDC39Q9UFE4 941 aa16.79■□□□□ 0.28
CLCN4-201ENST00000380829 NAP1L2Q9ULW6 460 aaPredicted RBP16.79■□□□□ 0.28
CLCN4-201ENST00000380829 ATP6V1DQ9Y5K8 247 aa16.79■□□□□ 0.28
CLCN4-201ENST00000380829 ATRNO75882 1429 aa16.79■□□□□ 0.28
CLCN4-201ENST00000380829 FIBPO43427 364 aa16.79■□□□□ 0.28
CLCN4-201ENST00000380829 MBD3O95983 291 aa16.79■□□□□ 0.28
CLCN4-201ENST00000380829 APPP05067 770 aa16.79■□□□□ 0.28
CLCN4-201ENST00000380829 DNM1Q05193 864 aaKnown RBP16.79■□□□□ 0.28
CLCN4-201ENST00000380829 DNTTIP2Q5QJE6 756 aaKnown RBP16.79■□□□□ 0.28
CLCN4-201ENST00000380829 ZNF213O14771 459 aa16.78■□□□□ 0.28
CLCN4-201ENST00000380829 DDX11Q96FC9 970 aa16.78■□□□□ 0.28
CLCN4-201ENST00000380829 GPHNQ9NQX3 736 aaPredicted RBP16.78■□□□□ 0.28
CLCN4-201ENST00000380829 CCT2P78371 535 aaKnown RBP16.78■□□□□ 0.28
CLCN4-201ENST00000380829 AIDAQ96BJ3 306 aa16.78■□□□□ 0.28
CLCN4-201ENST00000380829 AGXT2Q9BYV1 514 aa16.78■□□□□ 0.28
CLCN4-201ENST00000380829 TRPC5Q9UL62 973 aaPredicted RBP16.78■□□□□ 0.28
CLCN4-201ENST00000380829 CASZ1Q86V15 1759 aa16.77■□□□□ 0.28
CLCN4-201ENST00000380829 PFKFB2O60825 505 aa16.77■□□□□ 0.28
CLCN4-201ENST00000380829 PDIA4P13667 645 aaKnown RBP16.77■□□□□ 0.28
CLCN4-201ENST00000380829 PDCP20941 246 aa16.77■□□□□ 0.28
CLCN4-201ENST00000380829 GYG1P46976 350 aa16.77■□□□□ 0.28
CLCN4-201ENST00000380829 MAP3K12Q12852 859 aa16.77■□□□□ 0.28
CLCN4-201ENST00000380829 MYRIPQ8NFW9 859 aa16.77■□□□□ 0.28
CLCN4-201ENST00000380829 NYXQ9GZU5 481 aa16.77■□□□□ 0.28
CLCN4-201ENST00000380829 BSDC1Q9NW68 430 aaPredicted RBP16.77■□□□□ 0.28
CLCN4-201ENST00000380829 MCM5P33992 734 aa16.77■□□□□ 0.27
CLCN4-201ENST00000380829 SLC10A5Q5PT55 438 aa16.77■□□□□ 0.27
CLCN4-201ENST00000380829 NCOA5Q9HCD5 579 aaKnown RBP16.77■□□□□ 0.27
CLCN4-201ENST00000380829 PPFIA3O75145 1194 aa16.76■□□□□ 0.27
CLCN4-201ENST00000380829 FAM173BQ6P4H8 233 aa16.76■□□□□ 0.27
CLCN4-201ENST00000380829 TMEM87AQ8NBN3 555 aa16.76■□□□□ 0.27
CLCN4-201ENST00000380829 NBPF3Q9H094 633 aa16.76■□□□□ 0.27
CLCN4-201ENST00000380829 DENND2AQ9ULE3 1009 aa16.76■□□□□ 0.27
CLCN4-201ENST00000380829 MINPP1Q9UNW1 487 aa16.76■□□□□ 0.27
CLCN4-201ENST00000380829 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.76■□□□□ 0.27
CLCN4-201ENST00000380829 SBF2Q86WG5 1849 aa16.76■□□□□ 0.27
CLCN4-201ENST00000380829 RGL2O15211 777 aa16.76■□□□□ 0.27
CLCN4-201ENST00000380829 ONECUT3O60422 494 aaPredicted RBP16.76■□□□□ 0.27
CLCN4-201ENST00000380829 PTMAP06454 111 aaKnown RBP16.76■□□□□ 0.27
CLCN4-201ENST00000380829 FAM196AQ6ZSG2 479 aa16.76■□□□□ 0.27
CLCN4-201ENST00000380829 NLRP3Q96P20 1036 aa16.76■□□□□ 0.27
CLCN4-201ENST00000380829 STRBPQ96SI9 672 aaKnown RBP16.76■□□□□ 0.27
CLCN4-201ENST00000380829 LY75O60449 1722 aa16.75■□□□□ 0.27
CLCN4-201ENST00000380829 PRC1O43663 620 aa16.75■□□□□ 0.27
CLCN4-201ENST00000380829 MBD4O95243 580 aa16.75■□□□□ 0.27
CLCN4-201ENST00000380829 RFC4P35249 363 aa16.75■□□□□ 0.27
CLCN4-201ENST00000380829 KIAA2012Q0VF49 1180 aa16.75■□□□□ 0.27
CLCN4-201ENST00000380829 MB21D2Q8IYB1 491 aaPredicted RBP16.75■□□□□ 0.27
CLCN4-201ENST00000380829 LRRC4BQ9NT99 713 aa16.75■□□□□ 0.27
CLCN4-201ENST00000380829 TAF1LQ8IZX4 1826 aa16.75■□□□□ 0.27
CLCN4-201ENST00000380829 PDIA3P30101 505 aaKnown RBP16.75■□□□□ 0.27
CLCN4-201ENST00000380829 TPTE2Q6XPS3 522 aa16.75■□□□□ 0.27
CLCN4-201ENST00000380829 RALYLQ86SE5 291 aaKnown RBP16.75■□□□□ 0.27
CLCN4-201ENST00000380829 TBC1D10CQ8IV04 446 aa16.75■□□□□ 0.27
CLCN4-201ENST00000380829 NCOA7Q8NI08 942 aa16.75■□□□□ 0.27
CLCN4-201ENST00000380829 ARMT1Q9H993 441 aa16.75■□□□□ 0.27
CLCN4-201ENST00000380829 SPDYE4A6NLX3 237 aa16.74■□□□□ 0.27
CLCN4-201ENST00000380829 NPHP1O15259 732 aa16.74■□□□□ 0.27
CLCN4-201ENST00000380829 IGSF3O75054 1194 aa16.74■□□□□ 0.27
CLCN4-201ENST00000380829 CTDNEP1O95476 244 aa16.74■□□□□ 0.27
CLCN4-201ENST00000380829 FOSBP53539 338 aa16.74■□□□□ 0.27
CLCN4-201ENST00000380829 ANTXR2P58335 489 aa16.74■□□□□ 0.27
CLCN4-201ENST00000380829 TRAPPC3LQ5T215 181 aa16.74■□□□□ 0.27
CLCN4-201ENST00000380829 LRSAM1Q6UWE0 723 aa16.74■□□□□ 0.27
CLCN4-201ENST00000380829 C17orf53Q8N3J3 647 aaPredicted RBP16.74■□□□□ 0.27
CLCN4-201ENST00000380829 NSUN7Q8NE18 718 aaKnown RBP16.74■□□□□ 0.27
CLCN4-201ENST00000380829 QTRT2Q9H974 415 aaKnown RBP16.74■□□□□ 0.27
CLCN4-201ENST00000380829 LRP2BPQ9P2M1 347 aa16.74■□□□□ 0.27
CLCN4-201ENST00000380829 C4BP0C0L5 1744 aa16.74■□□□□ 0.27
CLCN4-201ENST00000380829 NKX2-3Q8TAU0 364 aa16.74■□□□□ 0.27
CLCN4-201ENST00000380829 DOCK2Q92608 1830 aa16.74■□□□□ 0.27
CLCN4-201ENST00000380829 COL24A1Q17RW2 1714 aa16.73■□□□□ 0.27
CLCN4-201ENST00000380829 PTPDC1A2A3K4 754 aa16.73■□□□□ 0.27
CLCN4-201ENST00000380829 RPS8P62241 208 aaKnown RBP16.73■□□□□ 0.27
CLCN4-201ENST00000380829 UBE4AQ14139 1066 aa16.73■□□□□ 0.27
CLCN4-201ENST00000380829 FAM184AQ8NB25 1140 aa16.73■□□□□ 0.27
CLCN4-201ENST00000380829 SMARCC2Q8TAQ2 1214 aa16.73■□□□□ 0.27
CLCN4-201ENST00000380829 ZNF830Q96NB3 372 aaPredicted RBP16.73■□□□□ 0.27
CLCN4-201ENST00000380829 EPB41L4AQ9HCS5 686 aaPredicted RBP16.73■□□□□ 0.27
CLCN4-201ENST00000380829 ABCF2Q9UG63 623 aa16.73■□□□□ 0.27
CLCN4-201ENST00000380829 ZNF804BA4D1E1 1349 aa16.73■□□□□ 0.27
CLCN4-201ENST00000380829 KLRK1P26718 216 aa16.72■□□□□ 0.27
CLCN4-201ENST00000380829 VPS37DQ86XT2 251 aa16.72■□□□□ 0.27
CLCN4-201ENST00000380829 MIGA1Q8NAN2 632 aa16.72■□□□□ 0.27
CLCN4-201ENST00000380829 ZNF274Q96GC6 653 aaPredicted RBP16.72■□□□□ 0.27
CLCN4-201ENST00000380829 LLPHQ9BRT6 129 aaKnown RBP16.72■□□□□ 0.27
CLCN4-201ENST00000380829 BCL11BQ9C0K0 894 aaPredicted RBP16.72■□□□□ 0.27
CLCN4-201ENST00000380829 A0A1B0GUL6 1792 aa16.72■□□□□ 0.27
CLCN4-201ENST00000380829 PRKAB2O43741 272 aa16.72■□□□□ 0.27
CLCN4-201ENST00000380829 RAB11FIP4Q86YS3 637 aa16.72■□□□□ 0.27
CLCN4-201ENST00000380829 LCORLQ8N3X6 602 aa16.72■□□□□ 0.27
CLCN4-201ENST00000380829 C4AP0C0L4 1744 aa16.72■□□□□ 0.27
CLCN4-201ENST00000380829 COL1A1P02452 1464 aaPredicted RBP16.72■□□□□ 0.27
CLCN4-201ENST00000380829 H3BQV1 296 aa16.71■□□□□ 0.27
CLCN4-201ENST00000380829 UBE2HP62256 183 aa16.71■□□□□ 0.27
CLCN4-201ENST00000380829 IFFO2Q5TF58 517 aa16.71■□□□□ 0.27
CLCN4-201ENST00000380829 GTPBP4Q9BZE4 634 aaKnown RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms