RNA–Protein interactions for RNA: ENST00000380327.9

TROAP-202, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TROAP, Length 675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-202ENST00000380327 USP44Q9H0E7 712 aa14.45□□□□□ -0.1
TROAP-202ENST00000380327 HPS5Q9UPZ3 1129 aa14.45□□□□□ -0.1
TROAP-202ENST00000380327 MYH13Q9UKX3 1938 aa14.45□□□□□ -0.1
TROAP-202ENST00000380327 UNCXA6NJT0 531 aa14.44□□□□□ -0.1
TROAP-202ENST00000380327 TCP10L2B9ZVM9 353 aa14.44□□□□□ -0.1
TROAP-202ENST00000380327 INHBEP58166 350 aa14.44□□□□□ -0.1
TROAP-202ENST00000380327 ALDH1L2Q3SY69 923 aa14.44□□□□□ -0.1
TROAP-202ENST00000380327 FBXO33Q7Z6M2 555 aa14.44□□□□□ -0.1
TROAP-202ENST00000380327 IFNL1Q8IU54 200 aa14.44□□□□□ -0.1
TROAP-202ENST00000380327 ANKRD13AQ8IZ07 590 aa14.44□□□□□ -0.1
TROAP-202ENST00000380327 TBC1D22AQ8WUA7 517 aa14.44□□□□□ -0.1
TROAP-202ENST00000380327 KIF16BQ96L93 1317 aa14.43□□□□□ -0.1
TROAP-202ENST00000380327 FKTNO75072 461 aa14.43□□□□□ -0.1
TROAP-202ENST00000380327 IFIT1P09914 478 aaKnown RBP14.43□□□□□ -0.1
TROAP-202ENST00000380327 TNNI2P48788 182 aa14.43□□□□□ -0.1
TROAP-202ENST00000380327 GRIK5Q16478 980 aa14.43□□□□□ -0.1
TROAP-202ENST00000380327 CDAN1Q8IWY9 1227 aa14.43□□□□□ -0.1
TROAP-202ENST00000380327 TEKT1Q969V4 418 aa14.43□□□□□ -0.1
TROAP-202ENST00000380327 CDCA7LQ96GN5 454 aa14.43□□□□□ -0.1
TROAP-202ENST00000380327 R3HDMLQ9H3Y0 253 aa14.43□□□□□ -0.1
TROAP-202ENST00000380327 MAST3O60307 1309 aa14.42□□□□□ -0.1
TROAP-202ENST00000380327 IGF2BP3O00425 579 aaKnown RBP eCLIP14.42□□□□□ -0.1
TROAP-202ENST00000380327 USP2O75604 605 aaPredicted RBP14.42□□□□□ -0.1
TROAP-202ENST00000380327 BCAMP50895 628 aa14.42□□□□□ -0.1
TROAP-202ENST00000380327 TMEM39BQ9GZU3 492 aa14.42□□□□□ -0.1
TROAP-202ENST00000380327 ELP3Q9H9T3 547 aa14.42□□□□□ -0.1
TROAP-202ENST00000380327 HTTP42858 3142 aa14.41□□□□□ -0.1
TROAP-202ENST00000380327 EYA2O00167 538 aa14.41□□□□□ -0.1
TROAP-202ENST00000380327 UBTFL1P0CB47 393 aaPredicted RBP14.41□□□□□ -0.1
TROAP-202ENST00000380327 SLC5A1P13866 664 aa14.41□□□□□ -0.1
TROAP-202ENST00000380327 GJA5P36382 358 aa14.41□□□□□ -0.1
TROAP-202ENST00000380327 HDLBPQ00341 1268 aaKnown RBP14.41□□□□□ -0.1
TROAP-202ENST00000380327 FBXO46Q6PJ61 603 aaPredicted RBP14.41□□□□□ -0.1
TROAP-202ENST00000380327 OPTNQ96CV9 577 aa14.41□□□□□ -0.1
TROAP-202ENST00000380327 TEPSINQ96N21 525 aa14.41□□□□□ -0.1
TROAP-202ENST00000380327 TMOD2Q9NZR1 351 aa14.41□□□□□ -0.1
TROAP-202ENST00000380327 FGFR2P21802 821 aa14.4□□□□□ -0.1
TROAP-202ENST00000380327 RFX5P48382 616 aaPredicted RBP14.4□□□□□ -0.1
TROAP-202ENST00000380327 CACNB3P54284 484 aa14.4□□□□□ -0.1
TROAP-202ENST00000380327 VGLL4Q14135 290 aa14.4□□□□□ -0.1
TROAP-202ENST00000380327 OTUD7BQ6GQQ9 843 aa14.4□□□□□ -0.1
TROAP-202ENST00000380327 LPIN2Q92539 896 aa14.4□□□□□ -0.1
TROAP-202ENST00000380327 SIL1Q9H173 461 aa14.4□□□□□ -0.1
TROAP-202ENST00000380327 CT47B1P0C2W7 299 aaPredicted RBP14.39□□□□□ -0.11
TROAP-202ENST00000380327 CRHR2Q13324 411 aa14.39□□□□□ -0.11
TROAP-202ENST00000380327 ZDHHC15Q96MV8 337 aa14.39□□□□□ -0.11
TROAP-202ENST00000380327 SUGT1Q9Y2Z0 365 aa14.39□□□□□ -0.11
TROAP-202ENST00000380327 CSADQ9Y600 493 aa14.39□□□□□ -0.11
TROAP-202ENST00000380327 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.38□□□□□ -0.11
TROAP-202ENST00000380327 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.38□□□□□ -0.113e-11■□□□□ 9.2
TROAP-202ENST00000380327 NOB1Q9ULX3 412 aaKnown RBP14.38□□□□□ -0.11
TROAP-202ENST00000380327 TRIM17Q9Y577 477 aa14.38□□□□□ -0.11
TROAP-202ENST00000380327 RPAP1Q9BWH6 1393 aaPredicted RBP14.37□□□□□ -0.11
TROAP-202ENST00000380327 CIAO1O76071 339 aa14.37□□□□□ -0.11
TROAP-202ENST00000380327 ATP2B3Q16720 1220 aa14.37□□□□□ -0.11
TROAP-202ENST00000380327 ATG9AQ7Z3C6 839 aa14.37□□□□□ -0.11
TROAP-202ENST00000380327 TRMT2AQ8IZ69 625 aaKnown RBP14.37□□□□□ -0.11
TROAP-202ENST00000380327 WDR66Q8TBY9 1149 aa14.37□□□□□ -0.11
TROAP-202ENST00000380327 CNKSR2Q8WXI2 1034 aa14.37□□□□□ -0.11
TROAP-202ENST00000380327 HOOK2Q96ED9 719 aa14.37□□□□□ -0.11
TROAP-202ENST00000380327 OTUD5Q96G74 571 aa14.37□□□□□ -0.11
TROAP-202ENST00000380327 WRNIP1Q96S55 665 aa14.37□□□□□ -0.11
TROAP-202ENST00000380327 PTPN18Q99952 460 aa14.37□□□□□ -0.11
TROAP-202ENST00000380327 API5Q9BZZ5 524 aaKnown RBP14.37□□□□□ -0.11
TROAP-202ENST00000380327 LRRFIP2Q9Y608 721 aaKnown RBP14.37□□□□□ -0.11
TROAP-202ENST00000380327 CENPFP49454 3210 aa14.37□□□□□ -0.11
TROAP-202ENST00000380327 CCL15-CCL14A0A0B4J2E2 113 aa14.36□□□□□ -0.11
TROAP-202ENST00000380327 TESPA1A2RU30 521 aaPredicted RBP14.36□□□□□ -0.11
TROAP-202ENST00000380327 MAP3K9P80192 1104 aa14.36□□□□□ -0.11
TROAP-202ENST00000380327 CCL15Q16663 113 aa14.36□□□□□ -0.11
TROAP-202ENST00000380327 APOBEC3HQ6NTF7 200 aaKnown RBP14.36□□□□□ -0.11
TROAP-202ENST00000380327 HHIPL2Q6UWX4 724 aa14.36□□□□□ -0.11
TROAP-202ENST00000380327 OTOP1Q7RTM1 612 aa14.36□□□□□ -0.11
TROAP-202ENST00000380327 FAM83AQ86UY5 434 aa14.36□□□□□ -0.11
TROAP-202ENST00000380327 ERO1AQ96HE7 468 aa14.36□□□□□ -0.11
TROAP-202ENST00000380327 FBXO3Q9UK99 471 aa14.36□□□□□ -0.11
TROAP-202ENST00000380327 BRCA2P51587 3418 aa14.35□□□□□ -0.11
TROAP-202ENST00000380327 GTF2A2P52657 109 aa14.35□□□□□ -0.11
TROAP-202ENST00000380327 FKBP1CQ5VVH2 108 aa14.35□□□□□ -0.11
TROAP-202ENST00000380327 CD99L2Q8TCZ2 262 aa14.35□□□□□ -0.11
TROAP-202ENST00000380327 BRI3BPQ8WY22 251 aa14.35□□□□□ -0.11
TROAP-202ENST00000380327 MS4A4AQ96JQ5 239 aa14.35□□□□□ -0.11
TROAP-202ENST00000380327 MRIQ9BWK5 157 aa14.35□□□□□ -0.11
TROAP-202ENST00000380327 GNL3LQ9NVN8 582 aaKnown RBP14.35□□□□□ -0.11
TROAP-202ENST00000380327 CEP126Q9P2H0 1117 aa14.35□□□□□ -0.11
TROAP-202ENST00000380327 HDAC5Q9UQL6 1122 aa14.35□□□□□ -0.11
TROAP-202ENST00000380327 SNCAIPQ9Y6H5 919 aa14.35□□□□□ -0.11
TROAP-202ENST00000380327 SPDYE5A6NIY4 337 aa14.34□□□□□ -0.11
TROAP-202ENST00000380327 PRDX5P30044 214 aa14.34□□□□□ -0.11
TROAP-202ENST00000380327 IL15P40933 162 aaPredicted RBP14.34□□□□□ -0.11
TROAP-202ENST00000380327 DIXDC1Q155Q3 683 aa14.34□□□□□ -0.11
TROAP-202ENST00000380327 DCAF15Q66K64 600 aa14.34□□□□□ -0.11
TROAP-202ENST00000380327 MEIS3Q99687 375 aa14.34□□□□□ -0.11
TROAP-202ENST00000380327 PA2G4Q9UQ80 394 aaKnown RBP14.34□□□□□ -0.11
TROAP-202ENST00000380327 DAGLAQ9Y4D2 1042 aa14.34□□□□□ -0.11
TROAP-202ENST00000380327 CCER2I3L3R5 266 aa14.33□□□□□ -0.12
TROAP-202ENST00000380327 LDHBP07195 334 aaKnown RBP14.33□□□□□ -0.12
TROAP-202ENST00000380327 RARSP54136 660 aaKnown RBP14.33□□□□□ -0.12
TROAP-202ENST00000380327 SP3Q02447 781 aa14.33□□□□□ -0.12
TROAP-202ENST00000380327 TAF1CQ15572 869 aaPredicted RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms