RNA–Protein interactions for RNA: ENST00000380071.7

RFC3-201, Transcript of replication factor C subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC3, Length 2,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-201ENST00000380071 SDF4Q9BRK5 362 aa14.17□□□□□ -0.14
RFC3-201ENST00000380071 ANO10Q9NW15 660 aa14.17□□□□□ -0.14
RFC3-201ENST00000380071 AKAP11Q9UKA4 1901 aa14.17□□□□□ -0.14
RFC3-201ENST00000380071 ANKRD18BA2A2Z9 1011 aa14.16□□□□□ -0.14
RFC3-201ENST00000380071 IRS4O14654 1257 aaPredicted RBP14.16□□□□□ -0.14
RFC3-201ENST00000380071 IDH1O75874 414 aaKnown RBP14.16□□□□□ -0.14
RFC3-201ENST00000380071 RXRAP19793 462 aa14.16□□□□□ -0.14
RFC3-201ENST00000380071 CDC25BP30305 580 aa14.16□□□□□ -0.14
RFC3-201ENST00000380071 MYSM1Q5VVJ2 828 aa14.16□□□□□ -0.14
RFC3-201ENST00000380071 AEBP2Q6ZN18 517 aaPredicted RBP14.16□□□□□ -0.14
RFC3-201ENST00000380071 C16orf45Q96MC5 204 aaPredicted RBP14.16□□□□□ -0.14
RFC3-201ENST00000380071 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.16□□□□□ -0.14
RFC3-201ENST00000380071 BCL2L12Q9HB09 334 aa14.16□□□□□ -0.14
RFC3-201ENST00000380071 SENP2Q9HC62 589 aa14.16□□□□□ -0.14
RFC3-201ENST00000380071 CDHR2Q9BYE9 1310 aa14.16□□□□□ -0.14
RFC3-201ENST00000380071 APPP05067 770 aa14.16□□□□□ -0.14
RFC3-201ENST00000380071 PHKA1P46020 1223 aa14.16□□□□□ -0.14
RFC3-201ENST00000380071 LRRC8AQ8IWT6 810 aa14.16□□□□□ -0.14
RFC3-201ENST00000380071 AOPEPQ8N6M6 819 aa14.16□□□□□ -0.14
RFC3-201ENST00000380071 INCENPQ9NQS7 918 aa14.16□□□□□ -0.14
RFC3-201ENST00000380071 TRMT112Q9UI30 125 aaKnown RBP14.16□□□□□ -0.14
RFC3-201ENST00000380071 A0A1W2PQ27 194 aa14.15□□□□□ -0.14
RFC3-201ENST00000380071 A0A1W2PQ64 194 aa14.15□□□□□ -0.14
RFC3-201ENST00000380071 A0A1W2PQD8 194 aa14.15□□□□□ -0.14
RFC3-201ENST00000380071 SPTLC2O15270 562 aa14.15□□□□□ -0.14
RFC3-201ENST00000380071 CHAF1AQ13111 956 aaPredicted RBP14.15□□□□□ -0.14
RFC3-201ENST00000380071 HELBQ8NG08 1087 aaPredicted RBP14.15□□□□□ -0.14
RFC3-201ENST00000380071 MRFAP1L1Q96HT8 127 aa14.15□□□□□ -0.14
RFC3-201ENST00000380071 POLR3EQ9NVU0 708 aa14.15□□□□□ -0.14
RFC3-201ENST00000380071 ZBTB1Q9Y2K1 713 aa14.15□□□□□ -0.14
RFC3-201ENST00000380071 ZNF532Q9HCE3 1301 aa14.15□□□□□ -0.14
RFC3-201ENST00000380071 MYO5AQ9Y4I1 1855 aaKnown RBP14.15□□□□□ -0.14
RFC3-201ENST00000380071 KAT6BQ8WYB5 2073 aa14.15□□□□□ -0.14
RFC3-201ENST00000380071 PDE8BO95263 885 aa14.15□□□□□ -0.14
RFC3-201ENST00000380071 CYP19A1P11511 503 aaPredicted RBP14.15□□□□□ -0.14
RFC3-201ENST00000380071 KIF23Q02241 960 aaPredicted RBP14.15□□□□□ -0.14
RFC3-201ENST00000380071 CCDC102BQ68D86 513 aa14.15□□□□□ -0.14
RFC3-201ENST00000380071 TBC1D2BQ9UPU7 963 aa14.15□□□□□ -0.14
RFC3-201ENST00000380071 ABCC12Q96J65 1359 aa14.15□□□□□ -0.14
RFC3-201ENST00000380071 MYH7P12883 1935 aa14.15□□□□□ -0.14
RFC3-201ENST00000380071 TRDNQ13061 729 aa14.14□□□□□ -0.15
RFC3-201ENST00000380071 KCNG4Q8TDN1 519 aa14.14□□□□□ -0.15
RFC3-201ENST00000380071 KIAA1468Q9P260 1216 aa14.14□□□□□ -0.15
RFC3-201ENST00000380071 WWC3Q9ULE0 1092 aa14.14□□□□□ -0.15
RFC3-201ENST00000380071 NEDD4P46934 1319 aa14.14□□□□□ -0.15
RFC3-201ENST00000380071 B4E1Z4 1266 aa14.14□□□□□ -0.15
RFC3-201ENST00000380071 SNAP23O00161 211 aa14.14□□□□□ -0.15
RFC3-201ENST00000380071 YEATS4O95619 227 aa14.14□□□□□ -0.15
RFC3-201ENST00000380071 CDC27P30260 824 aa14.14□□□□□ -0.15
RFC3-201ENST00000380071 DPCR1Q3MIW9 517 aa14.14□□□□□ -0.15
RFC3-201ENST00000380071 SYNE3Q6ZMZ3 975 aa14.14□□□□□ -0.15
RFC3-201ENST00000380071 BRAPQ7Z569 592 aa14.14□□□□□ -0.15
RFC3-201ENST00000380071 FILIP1Q7Z7B0 1213 aa14.14□□□□□ -0.15
RFC3-201ENST00000380071 CEP57L1Q8IYX8 460 aa14.14□□□□□ -0.15
RFC3-201ENST00000380071 ZNF512BQ96KM6 892 aaPredicted RBP14.14□□□□□ -0.15
RFC3-201ENST00000380071 BTG4Q9NY30 223 aa14.14□□□□□ -0.15
RFC3-201ENST00000380071 ANGEL1Q9UNK9 670 aaKnown RBP14.14□□□□□ -0.15
RFC3-201ENST00000380071 WDHD1O75717 1129 aaPredicted RBP14.13□□□□□ -0.15
RFC3-201ENST00000380071 TNNT1P13805 278 aa14.13□□□□□ -0.15
RFC3-201ENST00000380071 MARCKSP29966 332 aaPredicted RBP14.13□□□□□ -0.15
RFC3-201ENST00000380071 AXDND1Q5T1B0 1012 aaPredicted RBP14.13□□□□□ -0.15
RFC3-201ENST00000380071 ANO1Q5XXA6 986 aa14.13□□□□□ -0.15
RFC3-201ENST00000380071 WDR19Q8NEZ3 1342 aa14.13□□□□□ -0.15
RFC3-201ENST00000380071 TCRBV5S4A2TA0A5A2 114 aa14.13□□□□□ -0.15
RFC3-201ENST00000380071 BIN1O00499 593 aa14.13□□□□□ -0.15
RFC3-201ENST00000380071 SH2B2O14492 632 aaPredicted RBP14.13□□□□□ -0.15
RFC3-201ENST00000380071 ZNF202O95125 648 aa14.13□□□□□ -0.15
RFC3-201ENST00000380071 PDE6AP16499 860 aa14.13□□□□□ -0.15
RFC3-201ENST00000380071 METAP2P50579 478 aaKnown RBP eCLIP14.13□□□□□ -0.15
RFC3-201ENST00000380071 TTF1Q15361 905 aaPredicted RBP14.13□□□□□ -0.15
RFC3-201ENST00000380071 UBE3CQ15386 1083 aa14.13□□□□□ -0.15
RFC3-201ENST00000380071 TPD52L1Q16890 204 aaPredicted RBP14.13□□□□□ -0.15
RFC3-201ENST00000380071 PHKBQ93100 1093 aa14.13□□□□□ -0.15
RFC3-201ENST00000380071 ZNF335Q9H4Z2 1342 aaPredicted RBP14.13□□□□□ -0.15
RFC3-201ENST00000380071 USP27XA6NNY8 438 aa14.12□□□□□ -0.15
RFC3-201ENST00000380071 PDE8AO60658 829 aa14.12□□□□□ -0.15
RFC3-201ENST00000380071 SYTL4Q96C24 671 aaPredicted RBP14.12□□□□□ -0.15
RFC3-201ENST00000380071 ALG1Q9BT22 464 aa14.12□□□□□ -0.15
RFC3-201ENST00000380071 ZMYM6O95789 1325 aa14.12□□□□□ -0.15
RFC3-201ENST00000380071 UBN2Q6ZU65 1347 aa14.12□□□□□ -0.15
RFC3-201ENST00000380071 DDX60Q8IY21 1712 aaKnown RBP14.12□□□□□ -0.15
RFC3-201ENST00000380071 ABCA3Q99758 1704 aa14.12□□□□□ -0.15
RFC3-201ENST00000380071 UBE2Q2LH0YL09 131 aa14.12□□□□□ -0.15
RFC3-201ENST00000380071 STRBPQ96SI9 672 aaKnown RBP14.12□□□□□ -0.15
RFC3-201ENST00000380071 MYL10Q9BUA6 226 aa14.12□□□□□ -0.15
RFC3-201ENST00000380071 NAT10Q9H0A0 1025 aaKnown RBP14.12□□□□□ -0.15
RFC3-201ENST00000380071 C4AP0C0L4 1744 aa14.11□□□□□ -0.15
RFC3-201ENST00000380071 C4BP0C0L5 1744 aa14.11□□□□□ -0.15
RFC3-201ENST00000380071 ITGB4P16144 1822 aa14.11□□□□□ -0.15
RFC3-201ENST00000380071 CTIFO43310 598 aaKnown RBP14.11□□□□□ -0.15
RFC3-201ENST00000380071 PFKFB1P16118 471 aa14.11□□□□□ -0.15
RFC3-201ENST00000380071 ARID4AP29374 1257 aaPredicted RBP14.11□□□□□ -0.15
RFC3-201ENST00000380071 ISM2Q6H9L7 571 aa14.11□□□□□ -0.15
RFC3-201ENST00000380071 APOA5Q6Q788 366 aa14.11□□□□□ -0.15
RFC3-201ENST00000380071 NBPF11Q86T75 865 aa14.11□□□□□ -0.15
RFC3-201ENST00000380071 MICU3Q86XE3 530 aa14.11□□□□□ -0.15
RFC3-201ENST00000380071 IGDCC4Q8TDY8 1250 aa14.11□□□□□ -0.15
RFC3-201ENST00000380071 CCDC94Q9BW85 323 aaPredicted RBP14.11□□□□□ -0.15
RFC3-201ENST00000380071 TACC3Q9Y6A5 838 aa14.11□□□□□ -0.15
RFC3-201ENST00000380071 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms