RNA–Protein interactions for RNA: ENST00000379937.6

BRF1-203, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-203ENST00000379937 CCNL1Q9UK58 526 aaPredicted RBP18.25■□□□□ 0.51
BRF1-203ENST00000379937 ZSCAN30Q86W11 494 aa18.25■□□□□ 0.51
BRF1-203ENST00000379937 GOLPH3LQ9H4A5 285 aa18.25■□□□□ 0.51
BRF1-203ENST00000379937 ZSWIM5Q9P217 1185 aa18.25■□□□□ 0.51
BRF1-203ENST00000379937 GOLGA8AA7E2F4 631 aa18.24■□□□□ 0.51
BRF1-203ENST00000379937 KIF28PB7ZC32 967 aa18.24■□□□□ 0.51
BRF1-203ENST00000379937 TYRO3Q06418 890 aa18.24■□□□□ 0.51
BRF1-203ENST00000379937 MAP3K12Q12852 859 aa18.24■□□□□ 0.51
BRF1-203ENST00000379937 ALG1Q9BT22 464 aa18.24■□□□□ 0.51
BRF1-203ENST00000379937 PALLDQ8WX93 1383 aa18.24■□□□□ 0.51
BRF1-203ENST00000379937 PTMSP20962 102 aa18.24■□□□□ 0.51
BRF1-203ENST00000379937 PTGS1P23219 599 aa18.24■□□□□ 0.51
BRF1-203ENST00000379937 TRMT1Q9NXH9 659 aaKnown RBP18.24■□□□□ 0.51
BRF1-203ENST00000379937 USP21Q9UK80 565 aa18.24■□□□□ 0.51
BRF1-203ENST00000379937 STRCP1A6NGW2 1772 aa18.24■□□□□ 0.51
BRF1-203ENST00000379937 EIF6P56537 245 aaKnown RBP18.23■□□□□ 0.51
BRF1-203ENST00000379937 GOLGA8FQ08AF8 430 aa18.23■□□□□ 0.51
BRF1-203ENST00000379937 GOLGA8DPQ0D2H9 430 aa18.23■□□□□ 0.51
BRF1-203ENST00000379937 CCDC69A6NI79 296 aa18.23■□□□□ 0.51
BRF1-203ENST00000379937 FDPSP14324 419 aaKnown RBP18.23■□□□□ 0.51
BRF1-203ENST00000379937 CASP1P29466 404 aa18.23■□□□□ 0.51
BRF1-203ENST00000379937 PUM3Q15397 648 aaKnown RBP18.23■□□□□ 0.51
BRF1-203ENST00000379937 CCDC73Q6ZRK6 1079 aa18.23■□□□□ 0.51
BRF1-203ENST00000379937 ANKRD18AQ8IVF6 992 aa18.23■□□□□ 0.51
BRF1-203ENST00000379937 TEX13AQ9BXU3 409 aaPredicted RBP18.23■□□□□ 0.51
BRF1-203ENST00000379937 ZNF165P49910 485 aa18.23■□□□□ 0.51
BRF1-203ENST00000379937 NR5A1Q13285 461 aa18.23■□□□□ 0.51
BRF1-203ENST00000379937 CCDC152Q4G0S7 254 aa18.23■□□□□ 0.51
BRF1-203ENST00000379937 SETDB2Q96T68 719 aa18.23■□□□□ 0.51
BRF1-203ENST00000379937 TM6SF1Q9BZW5 370 aa18.23■□□□□ 0.51
BRF1-203ENST00000379937 VAT1LQ9HCJ6 419 aa18.23■□□□□ 0.51
BRF1-203ENST00000379937 PXDNLA1KZ92 1463 aa18.22■□□□□ 0.51
BRF1-203ENST00000379937 FAM205CA6NFA0 338 aa18.22■□□□□ 0.51
BRF1-203ENST00000379937 ZNF827Q17R98 1081 aa18.22■□□□□ 0.51
BRF1-203ENST00000379937 PLIN2Q99541 437 aa18.22■□□□□ 0.51
BRF1-203ENST00000379937 HELLSQ9NRZ9 838 aa18.22■□□□□ 0.51
BRF1-203ENST00000379937 ATP2B2Q01814 1243 aa18.22■□□□□ 0.51
BRF1-203ENST00000379937 GRAMD1CQ8IYS0 662 aa18.22■□□□□ 0.51
BRF1-203ENST00000379937 KINO60870 393 aaKnown RBP18.21■□□□□ 0.51
BRF1-203ENST00000379937 CCDC192P0DO97 292 aa18.21■□□□□ 0.51
BRF1-203ENST00000379937 IFNL3Q8IZI9 196 aa18.21■□□□□ 0.51
BRF1-203ENST00000379937 EPB41L4AQ9HCS5 686 aaPredicted RBP18.21■□□□□ 0.51
BRF1-203ENST00000379937 SLC12A7Q9Y666 1083 aa18.21■□□□□ 0.51
BRF1-203ENST00000379937 CDC25AP30304 524 aa18.21■□□□□ 0.51
BRF1-203ENST00000379937 FAM196AQ6ZSG2 479 aa18.21■□□□□ 0.51
BRF1-203ENST00000379937 C11orf57Q6ZUT1 292 aaPredicted RBP18.21■□□□□ 0.51
BRF1-203ENST00000379937 TACC3Q9Y6A5 838 aa18.21■□□□□ 0.51
BRF1-203ENST00000379937 SLIT3O75094 1523 aa18.21■□□□□ 0.51
BRF1-203ENST00000379937 ADAMTSL3P82987 1691 aa18.21■□□□□ 0.51
BRF1-203ENST00000379937 RFC4P35249 363 aa18.21■□□□□ 0.51
BRF1-203ENST00000379937 ADD2P35612 726 aa18.21■□□□□ 0.51
BRF1-203ENST00000379937 NKX1-1Q15270 411 aaPredicted RBP18.21■□□□□ 0.51
BRF1-203ENST00000379937 MFSD6Q6ZSS7 791 aa18.21■□□□□ 0.51
BRF1-203ENST00000379937 TRIM37O94972 964 aa18.2■□□□□ 0.5
BRF1-203ENST00000379937 EIF5P55010 431 aaKnown RBP18.2■□□□□ 0.5
BRF1-203ENST00000379937 FAM177A1Q8N128 213 aaPredicted RBP18.2■□□□□ 0.5
BRF1-203ENST00000379937 SLC44A5Q8NCS7 719 aa18.2■□□□□ 0.5
BRF1-203ENST00000379937 BTBD18B2RXH4 712 aa18.2■□□□□ 0.5
BRF1-203ENST00000379937 NFIXQ14938 502 aa18.2■□□□□ 0.5
BRF1-203ENST00000379937 CCDC186Q7Z3E2 898 aa18.2■□□□□ 0.5
BRF1-203ENST00000379937 LPIN2Q92539 896 aa18.2■□□□□ 0.5
BRF1-203ENST00000379937 NBPF3Q9H094 633 aa18.2■□□□□ 0.5
BRF1-203ENST00000379937 CPDO75976 1380 aa18.2■□□□□ 0.5
BRF1-203ENST00000379937 NOM1Q5C9Z4 860 aaKnown RBP18.2■□□□□ 0.5
BRF1-203ENST00000379937 C5P01031 1676 aa18.19■□□□□ 0.5
BRF1-203ENST00000379937 USP17L12C9JPN9 530 aa18.19■□□□□ 0.5
BRF1-203ENST00000379937 USP17L21D6R901 530 aa18.19■□□□□ 0.5
BRF1-203ENST00000379937 GOLGA6L19H0YKK7 550 aa18.19■□□□□ 0.5
BRF1-203ENST00000379937 CAMTA2O94983 1202 aa18.19■□□□□ 0.5
BRF1-203ENST00000379937 DYNLL2Q96FJ2 89 aa18.19■□□□□ 0.5
BRF1-203ENST00000379937 CBX8Q9HC52 389 aa18.19■□□□□ 0.5
BRF1-203ENST00000379937 VPS54Q9P1Q0 977 aa18.19■□□□□ 0.5
BRF1-203ENST00000379937 SCAF8Q9UPN6 1271 aaKnown RBP18.19■□□□□ 0.5
BRF1-203ENST00000379937 FAM170AA1A519 330 aa18.19■□□□□ 0.5
BRF1-203ENST00000379937 ERCC3P19447 782 aa18.19■□□□□ 0.5
BRF1-203ENST00000379937 NDUFA8P51970 172 aa18.19■□□□□ 0.5
BRF1-203ENST00000379937 KLHL10Q6JEL2 608 aa18.19■□□□□ 0.5
BRF1-203ENST00000379937 C16orf45Q96MC5 204 aaPredicted RBP18.19■□□□□ 0.5
BRF1-203ENST00000379937 UBAC1Q9BSL1 405 aa18.19■□□□□ 0.5
BRF1-203ENST00000379937 ZBTB43O43298 467 aa18.18■□□□□ 0.5
BRF1-203ENST00000379937 MXD3Q9BW11 206 aa18.18■□□□□ 0.5
BRF1-203ENST00000379937 CTNNA3Q9UI47 895 aa18.18■□□□□ 0.5
BRF1-203ENST00000379937 DHX16O60231 1041 aaKnown RBP18.18■□□□□ 0.5
BRF1-203ENST00000379937 CSF1RP07333 972 aa18.18■□□□□ 0.5
BRF1-203ENST00000379937 GOLGA8HP0CJ92 632 aa18.18■□□□□ 0.5
BRF1-203ENST00000379937 KIAA2012Q0VF49 1180 aa18.18■□□□□ 0.5
BRF1-203ENST00000379937 RESTQ13127 1097 aa18.18■□□□□ 0.5
BRF1-203ENST00000379937 SPATA31A1Q5TZJ5 1347 aa18.18■□□□□ 0.5
BRF1-203ENST00000379937 C6orf229H3BNL8 230 aa18.18■□□□□ 0.5
BRF1-203ENST00000379937 FOXN1O15353 648 aa18.18■□□□□ 0.5
BRF1-203ENST00000379937 SMC2O95347 1197 aa18.18■□□□□ 0.5
BRF1-203ENST00000379937 VEGFAP15692 232 aaPredicted RBP18.18■□□□□ 0.5
BRF1-203ENST00000379937 LMOD1P29536 600 aaPredicted RBP18.18■□□□□ 0.5
BRF1-203ENST00000379937 IARSP41252 1262 aaKnown RBP18.18■□□□□ 0.5
BRF1-203ENST00000379937 GRIN1Q05586 938 aa18.18■□□□□ 0.5
BRF1-203ENST00000379937 PICALMQ13492 652 aa18.18■□□□□ 0.5
BRF1-203ENST00000379937 DHX8Q14562 1220 aaKnown RBP18.18■□□□□ 0.5
BRF1-203ENST00000379937 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.18■□□□□ 0.5
BRF1-203ENST00000379937 PYCARDQ9ULZ3 195 aa18.18■□□□□ 0.5
BRF1-203ENST00000379937 STX8Q9UNK0 236 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms