RNA–Protein interactions for RNA: ENST00000379792.6

HERPUD1-203, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5 BASIC

Gene HERPUD1, Length 1,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-203ENST00000379792 MFAP1P55081 439 aaKnown RBP17.01■□□□□ 0.31
HERPUD1-203ENST00000379792 LRRFIP1Q32MZ4 808 aaKnown RBP17.01■□□□□ 0.31
HERPUD1-203ENST00000379792 CCDC129Q6ZRS4 1044 aa17.01■□□□□ 0.31
HERPUD1-203ENST00000379792 SCN9AQ15858 1988 aa17.01■□□□□ 0.31
HERPUD1-203ENST00000379792 RFX7Q2KHR2 1363 aa17■□□□□ 0.31
HERPUD1-203ENST00000379792 ZC3H4Q9UPT8 1303 aaKnown RBP17■□□□□ 0.31
HERPUD1-203ENST00000379792 M0R2C6 588 aa17■□□□□ 0.31
HERPUD1-203ENST00000379792 PSMD14O00487 310 aa17■□□□□ 0.31
HERPUD1-203ENST00000379792 ZFYP08048 801 aaPredicted RBP17■□□□□ 0.31
HERPUD1-203ENST00000379792 LMNB1P20700 586 aa17■□□□□ 0.31
HERPUD1-203ENST00000379792 NAA16Q6N069 864 aaPredicted RBP17■□□□□ 0.31
HERPUD1-203ENST00000379792 ADGRA1Q86SQ6 560 aa17■□□□□ 0.31
HERPUD1-203ENST00000379792 DZIP1Q86YF9 867 aaKnown RBP17■□□□□ 0.31
HERPUD1-203ENST00000379792 NSUN4Q96CB9 384 aaKnown RBP17■□□□□ 0.31
HERPUD1-203ENST00000379792 PUS7LQ9H0K6 701 aaKnown RBP17■□□□□ 0.31
HERPUD1-203ENST00000379792 RNF181Q9P0P0 153 aa17■□□□□ 0.31
HERPUD1-203ENST00000379792 SGSM2O43147 1006 aa17■□□□□ 0.31
HERPUD1-203ENST00000379792 CXCL9Q07325 125 aa17■□□□□ 0.31
HERPUD1-203ENST00000379792 UBE3CQ15386 1083 aa17■□□□□ 0.31
HERPUD1-203ENST00000379792 DIXDC1Q155Q3 683 aa17■□□□□ 0.31
HERPUD1-203ENST00000379792 ZNF589Q86UQ0 364 aaPredicted RBP17■□□□□ 0.31
HERPUD1-203ENST00000379792 RUFY2Q8WXA3 655 aa17■□□□□ 0.31
HERPUD1-203ENST00000379792 APPBP2Q92624 585 aa17■□□□□ 0.31
HERPUD1-203ENST00000379792 GPBP1L1Q9HC44 474 aaPredicted RBP17■□□□□ 0.31
HERPUD1-203ENST00000379792 MCMDC2Q4G0Z9 681 aa16.99■□□□□ 0.31
HERPUD1-203ENST00000379792 KIAA0825Q8IV33 1275 aa16.99■□□□□ 0.31
HERPUD1-203ENST00000379792 MIGA1Q8NAN2 632 aa16.99■□□□□ 0.31
HERPUD1-203ENST00000379792 MAST3O60307 1309 aa16.98■□□□□ 0.31
HERPUD1-203ENST00000379792 SCNN1DP51172 638 aa16.98■□□□□ 0.31
HERPUD1-203ENST00000379792 HELLSQ9NRZ9 838 aa16.98■□□□□ 0.31
HERPUD1-203ENST00000379792 ZBTB12Q9Y330 459 aaPredicted RBP16.98■□□□□ 0.31
HERPUD1-203ENST00000379792 VIL1P09327 827 aaKnown RBP16.97■□□□□ 0.31
HERPUD1-203ENST00000379792 CIAPIN1Q6FI81 312 aa16.97■□□□□ 0.31
HERPUD1-203ENST00000379792 TICAM2Q86XR7 235 aa16.97■□□□□ 0.31
HERPUD1-203ENST00000379792 TTF2Q9UNY4 1162 aaKnown RBP16.97■□□□□ 0.31
HERPUD1-203ENST00000379792 DOCK2Q92608 1830 aa16.97■□□□□ 0.31
HERPUD1-203ENST00000379792 RSBN1LQ6PCB5 846 aaPredicted RBP16.97■□□□□ 0.31
HERPUD1-203ENST00000379792 ANO2Q9NQ90 1003 aa16.97■□□□□ 0.31
HERPUD1-203ENST00000379792 FZD9O00144 591 aa16.96■□□□□ 0.31
HERPUD1-203ENST00000379792 MBD4O95243 580 aa16.96■□□□□ 0.31
HERPUD1-203ENST00000379792 EIF6P56537 245 aaKnown RBP16.96■□□□□ 0.31
HERPUD1-203ENST00000379792 FKBP1AP62942 108 aaKnown RBP16.96■□□□□ 0.31
HERPUD1-203ENST00000379792 DYNLL1P63167 89 aaKnown RBP16.96■□□□□ 0.31
HERPUD1-203ENST00000379792 ARMT1Q9H993 441 aa16.96■□□□□ 0.31
HERPUD1-203ENST00000379792 GJA3Q9Y6H8 435 aa16.96■□□□□ 0.31
HERPUD1-203ENST00000379792 ZNF541Q9H0D2 1346 aa16.96■□□□□ 0.3
HERPUD1-203ENST00000379792 GPAA1O43292 621 aa16.95■□□□□ 0.3
HERPUD1-203ENST00000379792 GSTO1P78417 241 aa16.95■□□□□ 0.3
HERPUD1-203ENST00000379792 PTH1RQ03431 593 aa16.95■□□□□ 0.3
HERPUD1-203ENST00000379792 SUGT1Q9Y2Z0 365 aa16.95■□□□□ 0.3
HERPUD1-203ENST00000379792 CCDC171Q6TFL3 1326 aa16.95■□□□□ 0.3
HERPUD1-203ENST00000379792 TNIP1Q15025 636 aa16.94■□□□□ 0.3
HERPUD1-203ENST00000379792 VPS53Q5VIR6 699 aa16.94■□□□□ 0.3
HERPUD1-203ENST00000379792 KIAA1211Q6ZU35 1233 aa16.94■□□□□ 0.3
HERPUD1-203ENST00000379792 LCORLQ8N3X6 602 aa16.94■□□□□ 0.3
HERPUD1-203ENST00000379792 ZNF526Q8TF50 670 aaPredicted RBP16.94■□□□□ 0.3
HERPUD1-203ENST00000379792 AIDAQ96BJ3 306 aa16.94■□□□□ 0.3
HERPUD1-203ENST00000379792 CCDC88AQ3V6T2 1871 aa16.94■□□□□ 0.3
HERPUD1-203ENST00000379792 RAD50Q92878 1312 aa16.94■□□□□ 0.3
HERPUD1-203ENST00000379792 MAGEB6P1A0A0J9YX57 407 aa16.94■□□□□ 0.3
HERPUD1-203ENST00000379792 REC8O95072 547 aa16.94■□□□□ 0.3
HERPUD1-203ENST00000379792 GMLQ99445 158 aa16.94■□□□□ 0.3
HERPUD1-203ENST00000379792 LSG1Q9H089 658 aaKnown RBP16.94■□□□□ 0.3
HERPUD1-203ENST00000379792 AATFQ9NY61 560 aaKnown RBP eCLIP16.94■□□□□ 0.3
HERPUD1-203ENST00000379792 PCDHAC2Q9Y5I4 1007 aa16.94■□□□□ 0.3
HERPUD1-203ENST00000379792 MYH7P12883 1935 aa16.94■□□□□ 0.3
HERPUD1-203ENST00000379792 DICER1Q9UPY3 1922 aaKnown RBP16.94■□□□□ 0.3
HERPUD1-203ENST00000379792 LDHCP07864 332 aa16.93■□□□□ 0.3
HERPUD1-203ENST00000379792 STRBPQ96SI9 672 aaKnown RBP16.93■□□□□ 0.3
HERPUD1-203ENST00000379792 DAGLAQ9Y4D2 1042 aa16.93■□□□□ 0.3
HERPUD1-203ENST00000379792 MROH7-TTC4A0A0A0MT08 1334 aa16.93■□□□□ 0.3
HERPUD1-203ENST00000379792 SHTN1A0MZ66 631 aa16.92■□□□□ 0.3
HERPUD1-203ENST00000379792 PRKAB2O43741 272 aa16.92■□□□□ 0.3
HERPUD1-203ENST00000379792 RIOK1Q9BRS2 568 aaKnown RBP16.92■□□□□ 0.3
HERPUD1-203ENST00000379792 USP26Q9BXU7 913 aa16.92■□□□□ 0.3
HERPUD1-203ENST00000379792 ZNF646O15015 1829 aaPredicted RBP16.92■□□□□ 0.3
HERPUD1-203ENST00000379792 TIAM2Q8IVF5 1701 aa16.92■□□□□ 0.3
HERPUD1-203ENST00000379792 CRKP46108 304 aa16.92■□□□□ 0.3
HERPUD1-203ENST00000379792 GMPSP49915 693 aaPredicted RBP16.92■□□□□ 0.3
HERPUD1-203ENST00000379792 RBM5P52756 815 aaKnown RBP eCLIP16.92■□□□□ 0.3
HERPUD1-203ENST00000379792 SLF2Q8IX21 1173 aa16.92■□□□□ 0.3
HERPUD1-203ENST00000379792 MYO3BQ8WXR4 1341 aa16.91■□□□□ 0.3
HERPUD1-203ENST00000379792 BTDP43251 543 aa16.91■□□□□ 0.3
HERPUD1-203ENST00000379792 C1QTNF8P60827 252 aa16.91■□□□□ 0.3
HERPUD1-203ENST00000379792 AGBL3Q8NEM8 1001 aa16.91■□□□□ 0.3
HERPUD1-203ENST00000379792 TEKT1Q969V4 418 aa16.91■□□□□ 0.3
HERPUD1-203ENST00000379792 FAM163AQ96GL9 167 aaPredicted RBP16.91■□□□□ 0.3
HERPUD1-203ENST00000379792 GAKO14976 1311 aa16.91■□□□□ 0.3
HERPUD1-203ENST00000379792 FOXP2O15409 715 aa16.9■□□□□ 0.3
HERPUD1-203ENST00000379792 IGSF3O75054 1194 aa16.9■□□□□ 0.3
HERPUD1-203ENST00000379792 APPP05067 770 aa16.9■□□□□ 0.3
HERPUD1-203ENST00000379792 USP17L8P0C7I0 530 aa16.9■□□□□ 0.3
HERPUD1-203ENST00000379792 HSPD1P10809 573 aaKnown RBP16.9■□□□□ 0.3
HERPUD1-203ENST00000379792 SH3RF3Q8TEJ3 882 aaPredicted RBP16.9■□□□□ 0.3
HERPUD1-203ENST00000379792 NOL10Q9BSC4 688 aaKnown RBP16.9■□□□□ 0.3
HERPUD1-203ENST00000379792 UPF2Q9HAU5 1272 aaKnown RBP16.9■□□□□ 0.3
HERPUD1-203ENST00000379792 SLC4A4Q9Y6R1 1079 aa16.9■□□□□ 0.3
HERPUD1-203ENST00000379792 GPR75-ASB3A0A0A6YYF3 556 aa16.89■□□□□ 0.3
HERPUD1-203ENST00000379792 GLTPD2A6NH11 291 aa16.89■□□□□ 0.3
HERPUD1-203ENST00000379792 KIF3CO14782 793 aa16.89■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms