RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 PPP1R12BO60237 982 aaPredicted RBP23.59■■□□□ 1.37
TMEM88B-201ENST00000378821 TNFAIP1Q13829 316 aa23.59■■□□□ 1.37
TMEM88B-201ENST00000378821 NBPF12Q5TAG4 269 aaPredicted RBP23.59■■□□□ 1.37
TMEM88B-201ENST00000378821 SPRYD7Q5W111 196 aa23.59■■□□□ 1.37
TMEM88B-201ENST00000378821 MEIS3Q99687 375 aa23.59■■□□□ 1.37
TMEM88B-201ENST00000378821 MCOLN1Q9GZU1 580 aa23.59■■□□□ 1.37
TMEM88B-201ENST00000378821 COPRSQ9NQ92 184 aa23.59■■□□□ 1.37
TMEM88B-201ENST00000378821 TNNQ9UQP3 1299 aa23.59■■□□□ 1.37
TMEM88B-201ENST00000378821 LRRFIP2Q9Y608 721 aaKnown RBP23.59■■□□□ 1.37
TMEM88B-201ENST00000378821 PRKG1Q13976 671 aa23.58■■□□□ 1.37
TMEM88B-201ENST00000378821 FRAT1Q92837 279 aaPredicted RBP23.58■■□□□ 1.37
TMEM88B-201ENST00000378821 TEPSINQ96N21 525 aa23.58■■□□□ 1.37
TMEM88B-201ENST00000378821 CFHR5Q9BXR6 569 aa23.58■■□□□ 1.37
TMEM88B-201ENST00000378821 TDRD3Q9H7E2 651 aaKnown RBP23.58■■□□□ 1.37
TMEM88B-201ENST00000378821 VEZTQ9HBM0 779 aa23.58■■□□□ 1.37
TMEM88B-201ENST00000378821 MYH13Q9UKX3 1938 aa23.57■■□□□ 1.36
TMEM88B-201ENST00000378821 SLC5A1P13866 664 aa23.57■■□□□ 1.36
TMEM88B-201ENST00000378821 TRIM27P14373 513 aa23.57■■□□□ 1.36
TMEM88B-201ENST00000378821 CHAF1AQ13111 956 aaPredicted RBP23.57■■□□□ 1.36
TMEM88B-201ENST00000378821 NOM1Q5C9Z4 860 aaKnown RBP23.57■■□□□ 1.36
TMEM88B-201ENST00000378821 ZDHHC15Q96MV8 337 aa23.57■■□□□ 1.36
TMEM88B-201ENST00000378821 FZD1Q9UP38 647 aa23.57■■□□□ 1.36
TMEM88B-201ENST00000378821 IPO8O15397 1037 aaKnown RBP23.56■■□□□ 1.36
TMEM88B-201ENST00000378821 FRAT2O75474 233 aaPredicted RBP23.56■■□□□ 1.36
TMEM88B-201ENST00000378821 USP2O75604 605 aaPredicted RBP23.56■■□□□ 1.36
TMEM88B-201ENST00000378821 MTX1Q13505 466 aa23.56■■□□□ 1.36
TMEM88B-201ENST00000378821 ATF7IPQ6VMQ6 1270 aa23.56■■□□□ 1.36
TMEM88B-201ENST00000378821 GNAI3P08754 354 aa23.55■■□□□ 1.36
TMEM88B-201ENST00000378821 ZBTB48P10074 688 aaPredicted RBP23.55■■□□□ 1.36
TMEM88B-201ENST00000378821 IL15P40933 162 aaPredicted RBP23.55■■□□□ 1.36
TMEM88B-201ENST00000378821 SREBF2Q12772 1141 aa23.55■■□□□ 1.36
TMEM88B-201ENST00000378821 DGKZQ13574 1117 aa23.55■■□□□ 1.36
TMEM88B-201ENST00000378821 TEKT1Q969V4 418 aa23.55■■□□□ 1.36
TMEM88B-201ENST00000378821 SLC10A4Q96EP9 437 aa23.55■■□□□ 1.36
TMEM88B-201ENST00000378821 CEP126Q9P2H0 1117 aa23.55■■□□□ 1.36
TMEM88B-201ENST00000378821 HHIPL2Q6UWX4 724 aa23.54■■□□□ 1.36
TMEM88B-201ENST00000378821 WDR66Q8TBY9 1149 aa23.54■■□□□ 1.36
TMEM88B-201ENST00000378821 SIL1Q9H173 461 aa23.54■■□□□ 1.36
TMEM88B-201ENST00000378821 MAST3O60307 1309 aa23.54■■□□□ 1.36
TMEM88B-201ENST00000378821 INHBEP58166 350 aa23.53■■□□□ 1.36
TMEM88B-201ENST00000378821 ATP2B3Q16720 1220 aa23.53■■□□□ 1.36
TMEM88B-201ENST00000378821 FKBP1CQ5VVH2 108 aa23.53■■□□□ 1.36
TMEM88B-201ENST00000378821 ZKSCAN2Q63HK3 967 aa23.53■■□□□ 1.36
TMEM88B-201ENST00000378821 APOBEC3HQ6NTF7 200 aaKnown RBP23.53■■□□□ 1.36
TMEM88B-201ENST00000378821 CLMNQ96JQ2 1002 aa23.53■■□□□ 1.36
TMEM88B-201ENST00000378821 IREB2P48200 963 aaKnown RBP23.52■■□□□ 1.36
TMEM88B-201ENST00000378821 CLUAP1Q96AJ1 413 aa23.52■■□□□ 1.36
TMEM88B-201ENST00000378821 WNK4Q96J92 1243 aa23.52■■□□□ 1.36
TMEM88B-201ENST00000378821 PA2G4Q9UQ80 394 aaKnown RBP23.52■■□□□ 1.36
TMEM88B-201ENST00000378821 OTOFQ9HC10 1997 aa23.52■■□□□ 1.36
TMEM88B-201ENST00000378821 MANSC4A6NHS7 340 aaPredicted RBP23.51■■□□□ 1.35
TMEM88B-201ENST00000378821 TNNI2P48788 182 aa23.51■■□□□ 1.35
TMEM88B-201ENST00000378821 RGS19P49795 217 aa23.51■■□□□ 1.35
TMEM88B-201ENST00000378821 MKRN3Q13064 507 aaKnown RBP23.51■■□□□ 1.35
TMEM88B-201ENST00000378821 FAM83AQ86UY5 434 aa23.51■■□□□ 1.35
TMEM88B-201ENST00000378821 ANKRD13AQ8IZ07 590 aa23.51■■□□□ 1.35
TMEM88B-201ENST00000378821 YTHDC1Q96MU7 727 aaKnown RBP23.51■■□□□ 1.35
TMEM88B-201ENST00000378821 SALL1Q9NSC2 1324 aa23.51■■□□□ 1.35
TMEM88B-201ENST00000378821 TCP10L2B9ZVM9 353 aa23.5■■□□□ 1.35
TMEM88B-201ENST00000378821 SEMA3EO15041 775 aa23.5■■□□□ 1.35
TMEM88B-201ENST00000378821 TBC1D8O95759 1140 aa23.5■■□□□ 1.35
TMEM88B-201ENST00000378821 CDAN1Q8IWY9 1227 aa23.5■■□□□ 1.35
TMEM88B-201ENST00000378821 TMEM39BQ9GZU3 492 aa23.5■■□□□ 1.35
TMEM88B-201ENST00000378821 ALDH1A1P00352 501 aa23.49■■□□□ 1.35
TMEM88B-201ENST00000378821 GNL3LQ9NVN8 582 aaKnown RBP23.49■■□□□ 1.35
TMEM88B-201ENST00000378821 CCDC85CA6NKD9 419 aa23.48■■□□□ 1.35
TMEM88B-201ENST00000378821 GJA5P36382 358 aa23.48■■□□□ 1.35
TMEM88B-201ENST00000378821 CTU1Q7Z7A3 348 aaKnown RBP23.48■■□□□ 1.35
TMEM88B-201ENST00000378821 IFNL1Q8IU54 200 aa23.48■■□□□ 1.35
TMEM88B-201ENST00000378821 TESPA1A2RU30 521 aaPredicted RBP23.47■■□□□ 1.35
TMEM88B-201ENST00000378821 GPR25O00155 361 aa23.47■■□□□ 1.35
TMEM88B-201ENST00000378821 SRGAP3O43295 1099 aa23.47■■□□□ 1.35
TMEM88B-201ENST00000378821 PHKA1P46020 1223 aa23.47■■□□□ 1.35
TMEM88B-201ENST00000378821 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.47■■□□□ 1.35
TMEM88B-201ENST00000378821 TMEM57Q8N5G2 664 aa23.47■■□□□ 1.35
TMEM88B-201ENST00000378821 ZNF296Q8WUU4 475 aaPredicted RBP23.47■■□□□ 1.35
TMEM88B-201ENST00000378821 DENND2AQ9ULE3 1009 aa23.47■■□□□ 1.35
TMEM88B-201ENST00000378821 PDS5AQ29RF7 1337 aaKnown RBP23.46■■□□□ 1.35
TMEM88B-201ENST00000378821 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.46■■□□□ 1.35
TMEM88B-201ENST00000378821 RPAP1Q9BWH6 1393 aaPredicted RBP23.46■■□□□ 1.35
TMEM88B-201ENST00000378821 R3HDMLQ9H3Y0 253 aa23.46■■□□□ 1.35
TMEM88B-201ENST00000378821 GNAI2P04899 355 aa23.45■■□□□ 1.34
TMEM88B-201ENST00000378821 CACNB3P54284 484 aa23.45■■□□□ 1.34
TMEM88B-201ENST00000378821 CCDC102BQ68D86 513 aa23.45■■□□□ 1.34
TMEM88B-201ENST00000378821 RCAN3Q9UKA8 241 aa23.45■■□□□ 1.34
TMEM88B-201ENST00000378821 RLBP1P12271 317 aa23.44■■□□□ 1.34
TMEM88B-201ENST00000378821 PRDX5P30044 214 aa23.44■■□□□ 1.34
TMEM88B-201ENST00000378821 ADORA1P30542 326 aa23.44■■□□□ 1.34
TMEM88B-201ENST00000378821 TIMM10P62072 90 aa23.44■■□□□ 1.34
TMEM88B-201ENST00000378821 MAP3K9P80192 1104 aa23.44■■□□□ 1.34
TMEM88B-201ENST00000378821 PKN2Q16513 984 aaKnown RBP23.44■■□□□ 1.34
TMEM88B-201ENST00000378821 FTSJ3Q8IY81 847 aaKnown RBP23.44■■□□□ 1.34
TMEM88B-201ENST00000378821 TMOD2Q9NZR1 351 aa23.44■■□□□ 1.34
TMEM88B-201ENST00000378821 AKAP2Q9Y2D5 859 aa23.44■■□□□ 1.34
TMEM88B-201ENST00000378821 DAGLAQ9Y4D2 1042 aa23.44■■□□□ 1.34
TMEM88B-201ENST00000378821 IGF2BP3O00425 579 aaKnown RBP eCLIP23.43■■□□□ 1.34
TMEM88B-201ENST00000378821 LDHBP07195 334 aaKnown RBP23.43■■□□□ 1.34
TMEM88B-201ENST00000378821 HOOK2Q96ED9 719 aa23.43■■□□□ 1.34
TMEM88B-201ENST00000378821 MS4A4AQ96JQ5 239 aa23.43■■□□□ 1.34
TMEM88B-201ENST00000378821 A0A1B0GUL7 405 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms