RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 TRIML1Q8N9V2 468 aa9.44□□□□□ -0.9
PTPRR-203ENST00000378778 ERCC4Q92889 916 aaPredicted RBP9.44□□□□□ -0.9
PTPRR-203ENST00000378778 KAZALD1Q96I82 304 aa9.44□□□□□ -0.9
PTPRR-203ENST00000378778 ST7Q9NRC1 585 aa9.44□□□□□ -0.9
PTPRR-203ENST00000378778 HPSEQ9Y251 543 aa9.44□□□□□ -0.9
PTPRR-203ENST00000378778 SERPINC1P01008 464 aa9.44□□□□□ -0.9
PTPRR-203ENST00000378778 MCM3P25205 808 aa9.44□□□□□ -0.9
PTPRR-203ENST00000378778 SRLQ86TD4 932 aa9.44□□□□□ -0.9
PTPRR-203ENST00000378778 TMEM139Q8IV31 216 aa9.44□□□□□ -0.9
PTPRR-203ENST00000378778 DDX54Q8TDD1 881 aaKnown RBP9.44□□□□□ -0.9
PTPRR-203ENST00000378778 SMARCE1Q969G3 411 aa9.44□□□□□ -0.9
PTPRR-203ENST00000378778 C8orf76Q96K31 380 aa9.44□□□□□ -0.9
PTPRR-203ENST00000378778 TCEANC2Q96MN5 208 aa9.44□□□□□ -0.9
PTPRR-203ENST00000378778 PANX2Q96RD6 677 aa9.44□□□□□ -0.9
PTPRR-203ENST00000378778 ESF1Q9H501 851 aaKnown RBP9.44□□□□□ -0.9
PTPRR-203ENST00000378778 C19orf44Q9H6X5 657 aa9.44□□□□□ -0.9
PTPRR-203ENST00000378778 MYO1AQ9UBC5 1043 aa9.44□□□□□ -0.9
PTPRR-203ENST00000378778 IQSEC3Q9UPP2 1182 aaPredicted RBP9.44□□□□□ -0.9
PTPRR-203ENST00000378778 ABCC12Q96J65 1359 aa9.44□□□□□ -0.9
PTPRR-203ENST00000378778 MYO1CO00159 1063 aa9.43□□□□□ -0.9
PTPRR-203ENST00000378778 ZMYM1Q5SVZ6 1142 aa9.43□□□□□ -0.9
PTPRR-203ENST00000378778 AXDND1Q5T1B0 1012 aaPredicted RBP9.43□□□□□ -0.9
PTPRR-203ENST00000378778 SRGAP1Q7Z6B7 1085 aa9.43□□□□□ -0.9
PTPRR-203ENST00000378778 CCDC191Q8NCU4 936 aa9.43□□□□□ -0.9
PTPRR-203ENST00000378778 FMNL2Q96PY5 1086 aa9.43□□□□□ -0.9
PTPRR-203ENST00000378778 BAG1Q99933 345 aaPredicted RBP9.43□□□□□ -0.9
PTPRR-203ENST00000378778 TRIM34Q9BYJ4 488 aa9.43□□□□□ -0.9
PTPRR-203ENST00000378778 MED4Q9NPJ6 270 aa9.43□□□□□ -0.9
PTPRR-203ENST00000378778 ADAM21Q9UKJ8 722 aa9.43□□□□□ -0.9
PTPRR-203ENST00000378778 RNMTO43148 476 aaKnown RBP9.43□□□□□ -0.9
PTPRR-203ENST00000378778 CUTAO60888 179 aa9.43□□□□□ -0.9
PTPRR-203ENST00000378778 CDKL5O76039 1030 aa9.43□□□□□ -0.9
PTPRR-203ENST00000378778 CEBPZQ03701 1054 aaKnown RBP9.43□□□□□ -0.9
PTPRR-203ENST00000378778 KCNH5Q8NCM2 988 aa9.43□□□□□ -0.9
PTPRR-203ENST00000378778 CCDC51Q96ER9 411 aa9.43□□□□□ -0.9
PTPRR-203ENST00000378778 VIPAS39Q9H9C1 493 aa9.43□□□□□ -0.9
PTPRR-203ENST00000378778 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.43□□□□□ -0.9
PTPRR-203ENST00000378778 TAF6LQ9Y6J9 622 aa9.43□□□□□ -0.9
PTPRR-203ENST00000378778 C4AP0C0L4 1744 aa9.42□□□□□ -0.9
PTPRR-203ENST00000378778 C4BP0C0L5 1744 aa9.42□□□□□ -0.9
PTPRR-203ENST00000378778 A0A1B0GUL7 405 aa9.42□□□□□ -0.9
PTPRR-203ENST00000378778 A0A1B0GVL5 298 aa9.42□□□□□ -0.9
PTPRR-203ENST00000378778 E7EWF7 191 aa9.42□□□□□ -0.9
PTPRR-203ENST00000378778 PFKFB1P16118 471 aa9.42□□□□□ -0.9
PTPRR-203ENST00000378778 MAGEA9P43362 315 aa9.42□□□□□ -0.9
PTPRR-203ENST00000378778 SYKP43405 635 aa9.42□□□□□ -0.9
PTPRR-203ENST00000378778 MKRN4PQ13434 485 aaPredicted RBP9.42□□□□□ -0.9
PTPRR-203ENST00000378778 LONRF2Q1L5Z9 754 aa9.42□□□□□ -0.9
PTPRR-203ENST00000378778 CFAP100Q494V2 611 aa9.42□□□□□ -0.9
PTPRR-203ENST00000378778 MLKLQ8NB16 471 aa9.42□□□□□ -0.9
PTPRR-203ENST00000378778 FAM71BQ8TC56 605 aa9.42□□□□□ -0.9
PTPRR-203ENST00000378778 KIFC2Q96AC6 838 aa9.42□□□□□ -0.9
PTPRR-203ENST00000378778 PARD6BQ9BYG5 372 aa9.42□□□□□ -0.9
PTPRR-203ENST00000378778 HSD3B7Q9H2F3 369 aa9.42□□□□□ -0.9
PTPRR-203ENST00000378778 AFDNP55196 1824 aaKnown RBP9.42□□□□□ -0.9
PTPRR-203ENST00000378778 SOCS7O14512 581 aa9.42□□□□□ -0.9
PTPRR-203ENST00000378778 POLR3GO15318 223 aaPredicted RBP9.42□□□□□ -0.9
PTPRR-203ENST00000378778 ZFYP08048 801 aaPredicted RBP9.42□□□□□ -0.9
PTPRR-203ENST00000378778 RFX5P48382 616 aaPredicted RBP9.42□□□□□ -0.9
PTPRR-203ENST00000378778 GNG11P61952 73 aa9.42□□□□□ -0.9
PTPRR-203ENST00000378778 APOBRQ0VD83 1088 aa9.42□□□□□ -0.9
PTPRR-203ENST00000378778 GCKRQ14397 625 aa9.42□□□□□ -0.9
PTPRR-203ENST00000378778 SPECC1LQ69YQ0 1117 aa9.42□□□□□ -0.9
PTPRR-203ENST00000378778 KANK3Q6NY19 840 aa9.42□□□□□ -0.9
PTPRR-203ENST00000378778 ARHGEF25Q86VW2 580 aa9.42□□□□□ -0.9
PTPRR-203ENST00000378778 CTCFLQ8NI51 663 aaPredicted RBP9.42□□□□□ -0.9
PTPRR-203ENST00000378778 ENOX1Q8TC92 643 aaKnown RBP9.42□□□□□ -0.9
PTPRR-203ENST00000378778 CCDC34Q96HJ3 373 aa9.42□□□□□ -0.9
PTPRR-203ENST00000378778 METTL22Q9BUU2 404 aaPredicted RBP9.42□□□□□ -0.9
PTPRR-203ENST00000378778 TLR7Q9NYK1 1049 aaKnown RBP9.42□□□□□ -0.9
PTPRR-203ENST00000378778 DBNLQ9UJU6 430 aaKnown RBP9.42□□□□□ -0.9
PTPRR-203ENST00000378778 PARP4Q9UKK3 1724 aaKnown RBP9.42□□□□□ -0.9
PTPRR-203ENST00000378778 NEURL1BA8MQ27 555 aa9.41□□□□□ -0.9
PTPRR-203ENST00000378778 SEMA3EO15041 775 aa9.41□□□□□ -0.9
PTPRR-203ENST00000378778 NPHP1O15259 732 aa9.41□□□□□ -0.9
PTPRR-203ENST00000378778 SASH3O75995 380 aa9.41□□□□□ -0.9
PTPRR-203ENST00000378778 CCDC175P0C221 793 aa9.41□□□□□ -0.9
PTPRR-203ENST00000378778 WHAMMP3Q1A5X7 153 aa9.41□□□□□ -0.9
PTPRR-203ENST00000378778 C1orf141Q5JVX7 400 aa9.41□□□□□ -0.9
PTPRR-203ENST00000378778 STOX1Q6ZVD7 989 aa9.41□□□□□ -0.9
PTPRR-203ENST00000378778 WDR17Q8IZU2 1322 aa9.41□□□□□ -0.9
PTPRR-203ENST00000378778 LRRN4CLQ8ND94 238 aa9.41□□□□□ -0.9
PTPRR-203ENST00000378778 NEK11Q8NG66 645 aa9.41□□□□□ -0.9
PTPRR-203ENST00000378778 ATG3Q9NT62 314 aa9.41□□□□□ -0.9
PTPRR-203ENST00000378778 CDC23Q9UJX2 597 aa9.41□□□□□ -0.9
PTPRR-203ENST00000378778 RRP15Q9Y3B9 282 aaKnown RBP9.41□□□□□ -0.9
PTPRR-203ENST00000378778 FDPSP14324 419 aaKnown RBP9.41□□□□□ -0.9
PTPRR-203ENST00000378778 PIP4K2BP78356 416 aa9.41□□□□□ -0.9
PTPRR-203ENST00000378778 NT5DC1Q5TFE4 455 aa9.41□□□□□ -0.9
PTPRR-203ENST00000378778 RESP18Q5W5W9 173 aa9.41□□□□□ -0.9
PTPRR-203ENST00000378778 CCDC102BQ68D86 513 aa9.41□□□□□ -0.9
PTPRR-203ENST00000378778 ZNF530Q6P9A1 599 aaPredicted RBP9.41□□□□□ -0.9
PTPRR-203ENST00000378778 PPM1EQ8WY54 764 aa9.41□□□□□ -0.9
PTPRR-203ENST00000378778 GEMIN8Q9NWZ8 242 aaKnown RBP9.41□□□□□ -0.9
PTPRR-203ENST00000378778 EID1Q9Y6B2 187 aa9.41□□□□□ -0.9
PTPRR-203ENST00000378778 CPP00450 1065 aa9.4□□□□□ -0.9
PTPRR-203ENST00000378778 LMOD1P29536 600 aaPredicted RBP9.4□□□□□ -0.9
PTPRR-203ENST00000378778 NOP2P46087 812 aaKnown RBP9.4□□□□□ -0.9
PTPRR-203ENST00000378778 CHMP4BP1P59074 171 aa9.4□□□□□ -0.9
PTPRR-203ENST00000378778 KIF23Q02241 960 aaPredicted RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms