RNA–Protein interactions for RNA: ENST00000378735.5

KIF3A-201, Transcript of kinesin family member 3A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene KIF3A, Length 3,266 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3A-201ENST00000378735 BOLA2Q9H3K6 86 aa15.74■□□□□ 0.11
KIF3A-201ENST00000378735 ACBD3Q9H3P7 528 aa15.74■□□□□ 0.11
KIF3A-201ENST00000378735 SPTLC2O15270 562 aa15.73■□□□□ 0.11
KIF3A-201ENST00000378735 BRAPQ7Z569 592 aa15.73■□□□□ 0.11
KIF3A-201ENST00000378735 NGDNQ8NEJ9 315 aaKnown RBP15.73■□□□□ 0.11
KIF3A-201ENST00000378735 MED4Q9NPJ6 270 aa15.73■□□□□ 0.11
KIF3A-201ENST00000378735 C9orf78Q9NZ63 289 aaPredicted RBP15.73■□□□□ 0.11
KIF3A-201ENST00000378735 MARF1Q9Y4F3 1742 aaKnown RBP15.73■□□□□ 0.11
KIF3A-201ENST00000378735 CARMIL3Q8ND23 1372 aa15.73■□□□□ 0.11
KIF3A-201ENST00000378735 CUTAO60888 179 aa15.73■□□□□ 0.11
KIF3A-201ENST00000378735 CYP21A2P08686 494 aa15.73■□□□□ 0.11
KIF3A-201ENST00000378735 COL15A1P39059 1388 aa15.73■□□□□ 0.11
KIF3A-201ENST00000378735 DPF2Q92785 391 aa15.72■□□□□ 0.11
KIF3A-201ENST00000378735 ANKZF1Q9H8Y5 726 aa15.72■□□□□ 0.11
KIF3A-201ENST00000378735 CHPF2Q9P2E5 772 aa15.72■□□□□ 0.11
KIF3A-201ENST00000378735 UTYO14607 1347 aa15.72■□□□□ 0.11
KIF3A-201ENST00000378735 CEMIPQ8WUJ3 1361 aa15.72■□□□□ 0.11
KIF3A-201ENST00000378735 EIF4A1P60842 406 aaKnown RBP15.72■□□□□ 0.11
KIF3A-201ENST00000378735 CCDC8Q9H0W5 538 aaPredicted RBP15.72■□□□□ 0.11
KIF3A-201ENST00000378735 BIN1O00499 593 aa15.72■□□□□ 0.11
KIF3A-201ENST00000378735 EXOSC10Q01780 885 aaKnown RBP15.72■□□□□ 0.11
KIF3A-201ENST00000378735 HSP90B2PQ58FF3 399 aa15.72■□□□□ 0.11
KIF3A-201ENST00000378735 TICAM2Q86XR7 235 aa15.72■□□□□ 0.11
KIF3A-201ENST00000378735 PPFIA4O75335 1185 aa15.71■□□□□ 0.11
KIF3A-201ENST00000378735 FBXL16Q8N461 479 aa15.71■□□□□ 0.11
KIF3A-201ENST00000378735 SIL1Q9H173 461 aa15.71■□□□□ 0.11
KIF3A-201ENST00000378735 CDC23Q9UJX2 597 aa15.71■□□□□ 0.11
KIF3A-201ENST00000378735 MCM6Q14566 821 aa15.71■□□□□ 0.11
KIF3A-201ENST00000378735 FAM177A1Q8N128 213 aaPredicted RBP15.71■□□□□ 0.11
KIF3A-201ENST00000378735 SOX12O15370 315 aa15.7■□□□□ 0.1
KIF3A-201ENST00000378735 ATP5JP18859 108 aa15.7■□□□□ 0.1
KIF3A-201ENST00000378735 LRRC31Q6UY01 552 aa15.7■□□□□ 0.1
KIF3A-201ENST00000378735 CCDC12Q8WUD4 166 aaPredicted RBP15.7■□□□□ 0.1
KIF3A-201ENST00000378735 CEP89Q96ST8 783 aa15.7■□□□□ 0.1
KIF3A-201ENST00000378735 FAN1Q9Y2M0 1017 aa15.7■□□□□ 0.1
KIF3A-201ENST00000378735 KIF1AQ12756 1690 aa15.7■□□□□ 0.1
KIF3A-201ENST00000378735 MCMDC2Q4G0Z9 681 aa15.7■□□□□ 0.1
KIF3A-201ENST00000378735 AXDND1Q5T1B0 1012 aaPredicted RBP15.7■□□□□ 0.1
KIF3A-201ENST00000378735 MMS22LQ6ZRQ5 1243 aa15.7■□□□□ 0.1
KIF3A-201ENST00000378735 A0A087WUV0 522 aaPredicted RBP15.7■□□□□ 0.1
KIF3A-201ENST00000378735 PFKFB1P16118 471 aa15.7■□□□□ 0.1
KIF3A-201ENST00000378735 EIF2S2P20042 333 aaKnown RBP15.7■□□□□ 0.1
KIF3A-201ENST00000378735 AMPHP49418 695 aa15.7■□□□□ 0.1
KIF3A-201ENST00000378735 OLFM4Q6UX06 510 aa15.7■□□□□ 0.1
KIF3A-201ENST00000378735 CCDC91Q7Z6B0 441 aa15.7■□□□□ 0.1
KIF3A-201ENST00000378735 ZBTB9Q96C00 473 aa15.7■□□□□ 0.1
KIF3A-201ENST00000378735 TLR7Q9NYK1 1049 aaKnown RBP15.7■□□□□ 0.1
KIF3A-201ENST00000378735 AKAP2Q9Y2D5 859 aa15.7■□□□□ 0.1
KIF3A-201ENST00000378735 CLIC4Q9Y696 253 aa15.7■□□□□ 0.1
KIF3A-201ENST00000378735 EIF5P55010 431 aaKnown RBP15.69■□□□□ 0.1
KIF3A-201ENST00000378735 TC2NQ8N9U0 490 aa15.69■□□□□ 0.1
KIF3A-201ENST00000378735 C19orf44Q9H6X5 657 aa15.69■□□□□ 0.1
KIF3A-201ENST00000378735 VIPAS39Q9H9C1 493 aa15.69■□□□□ 0.1
KIF3A-201ENST00000378735 FAM237AA0A1B0GTK4 181 aa15.69■□□□□ 0.1
KIF3A-201ENST00000378735 MCTP2Q6DN12 878 aa15.69■□□□□ 0.1
KIF3A-201ENST00000378735 ZNF609O15014 1411 aa15.69■□□□□ 0.1
KIF3A-201ENST00000378735 LOC102724159A0A0B4J2E5 919 aa15.69■□□□□ 0.1
KIF3A-201ENST00000378735 CCDC175P0C221 793 aa15.69■□□□□ 0.1
KIF3A-201ENST00000378735 DCCP43146 1447 aa15.69■□□□□ 0.1
KIF3A-201ENST00000378735 FOSBP53539 338 aa15.69■□□□□ 0.1
KIF3A-201ENST00000378735 PWP2Q15269 919 aaKnown RBP15.69■□□□□ 0.1
KIF3A-201ENST00000378735 MYSM1Q5VVJ2 828 aa15.69■□□□□ 0.1
KIF3A-201ENST00000378735 SPECC1LQ69YQ0 1117 aa15.69■□□□□ 0.1
KIF3A-201ENST00000378735 TOGARAM2Q6ZUX3 1019 aa15.69■□□□□ 0.1
KIF3A-201ENST00000378735 ELOA2Q8IYF1 753 aaPredicted RBP15.69■□□□□ 0.1
KIF3A-201ENST00000378735 PHF8Q9UPP1 1060 aa15.69■□□□□ 0.1
KIF3A-201ENST00000378735 PDIA3P30101 505 aaKnown RBP15.68■□□□□ 0.1
KIF3A-201ENST00000378735 FOXR1Q6PIV2 292 aa15.68■□□□□ 0.1
KIF3A-201ENST00000378735 KSR2Q6VAB6 950 aa15.68■□□□□ 0.1
KIF3A-201ENST00000378735 STOX1Q6ZVD7 989 aa15.68■□□□□ 0.1
KIF3A-201ENST00000378735 DBF4Q9UBU7 674 aaPredicted RBP15.68■□□□□ 0.1
KIF3A-201ENST00000378735 SH3TC1Q8TE82 1336 aa15.68■□□□□ 0.1
KIF3A-201ENST00000378735 TMEM232C9JQI7 657 aa15.68■□□□□ 0.1
KIF3A-201ENST00000378735 DNAJC21Q5F1R6 531 aaKnown RBP15.68■□□□□ 0.1
KIF3A-201ENST00000378735 NAA15Q9BXJ9 866 aaKnown RBP15.68■□□□□ 0.1
KIF3A-201ENST00000378735 ABCB6Q9NP58 842 aa15.68■□□□□ 0.1
KIF3A-201ENST00000378735 INTS13Q9NVM9 706 aa15.68■□□□□ 0.1
KIF3A-201ENST00000378735 HPSEQ9Y251 543 aa15.68■□□□□ 0.1
KIF3A-201ENST00000378735 PSEN1P49768 467 aa15.67■□□□□ 0.1
KIF3A-201ENST00000378735 GSCP56915 257 aaPredicted RBP15.67■□□□□ 0.1
KIF3A-201ENST00000378735 CASP8Q14790 479 aa15.67■□□□□ 0.1
KIF3A-201ENST00000378735 NBPF6Q5VWK0 638 aa15.67■□□□□ 0.1
KIF3A-201ENST00000378735 TADA2BQ86TJ2 420 aa15.67■□□□□ 0.1
KIF3A-201ENST00000378735 ARHGEF25Q86VW2 580 aa15.67■□□□□ 0.1
KIF3A-201ENST00000378735 CNNM3Q8NE01 707 aa15.67■□□□□ 0.1
KIF3A-201ENST00000378735 NBPF4Q96M43 638 aa15.67■□□□□ 0.1
KIF3A-201ENST00000378735 LRRC2Q9BYS8 371 aa15.67■□□□□ 0.1
KIF3A-201ENST00000378735 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.67■□□□□ 0.1
KIF3A-201ENST00000378735 WDHD1O75717 1129 aaPredicted RBP15.67■□□□□ 0.1
KIF3A-201ENST00000378735 FDPSP14324 419 aaKnown RBP15.67■□□□□ 0.1
KIF3A-201ENST00000378735 ANO1Q5XXA6 986 aa15.67■□□□□ 0.1
KIF3A-201ENST00000378735 SYNE3Q6ZMZ3 975 aa15.67■□□□□ 0.1
KIF3A-201ENST00000378735 CTCFLQ8NI51 663 aaPredicted RBP15.67■□□□□ 0.1
KIF3A-201ENST00000378735 DRC1Q96MC2 740 aa15.67■□□□□ 0.1
KIF3A-201ENST00000378735 PANX2Q96RD6 677 aa15.67■□□□□ 0.1
KIF3A-201ENST00000378735 DSCC1Q9BVC3 393 aa15.67■□□□□ 0.1
KIF3A-201ENST00000378735 PHRF1Q9P1Y6 1649 aaKnown RBP15.67■□□□□ 0.1
KIF3A-201ENST00000378735 SYKP43405 635 aa15.67■□□□□ 0.1
KIF3A-201ENST00000378735 AARSP49588 968 aaKnown RBP eCLIP15.67■□□□□ 0.1
KIF3A-201ENST00000378735 CCT2P78371 535 aaKnown RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms