RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 BAG6P46379 1132 aa20.36■□□□□ 0.85
CLSTN1-202ENST00000377298 RPS8P62241 208 aaKnown RBP20.36■□□□□ 0.85
CLSTN1-202ENST00000377298 TBC1D22AQ8WUA7 517 aa20.36■□□□□ 0.85
CLSTN1-202ENST00000377298 ZKSCAN3Q9BRR0 538 aa20.36■□□□□ 0.85
CLSTN1-202ENST00000377298 CTSWP56202 376 aa20.35■□□□□ 0.85
CLSTN1-202ENST00000377298 DHX58Q96C10 678 aa20.35■□□□□ 0.85
CLSTN1-202ENST00000377298 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.35■□□□□ 0.852e-6■■■■■ 28
CLSTN1-202ENST00000377298 USP6P35125 1406 aa20.35■□□□□ 0.85
CLSTN1-202ENST00000377298 RXRAP19793 462 aa20.35■□□□□ 0.85
CLSTN1-202ENST00000377298 PLS1Q14651 629 aa20.35■□□□□ 0.85
CLSTN1-202ENST00000377298 MCM3P25205 808 aa20.35■□□□□ 0.85
CLSTN1-202ENST00000377298 UBASH3AP57075 661 aa20.35■□□□□ 0.85
CLSTN1-202ENST00000377298 ANGEL1Q9UNK9 670 aaKnown RBP20.35■□□□□ 0.85
CLSTN1-202ENST00000377298 ATP5JP18859 108 aa20.35■□□□□ 0.85
CLSTN1-202ENST00000377298 LUZP1Q86V48 1076 aa20.35■□□□□ 0.85
CLSTN1-202ENST00000377298 KRT13P13646 458 aa20.34■□□□□ 0.85
CLSTN1-202ENST00000377298 PDE6BP35913 854 aa20.34■□□□□ 0.85
CLSTN1-202ENST00000377298 DTHD1Q6ZMT9 781 aa20.34■□□□□ 0.85
CLSTN1-202ENST00000377298 IGSF1Q8N6C5 1336 aa20.34■□□□□ 0.85
CLSTN1-202ENST00000377298 RAB3GAP1Q15042 981 aa20.34■□□□□ 0.85
CLSTN1-202ENST00000377298 LARGE2Q8N3Y3 721 aa20.34■□□□□ 0.85
CLSTN1-202ENST00000377298 USP44Q9H0E7 712 aa20.34■□□□□ 0.85
CLSTN1-202ENST00000377298 ANO6Q4KMQ2 910 aa20.34■□□□□ 0.85
CLSTN1-202ENST00000377298 LLPHQ9BRT6 129 aaKnown RBP20.34■□□□□ 0.85
CLSTN1-202ENST00000377298 MAP9Q49MG5 647 aa20.34■□□□□ 0.85
CLSTN1-202ENST00000377298 SSH3Q8TE77 659 aa20.34■□□□□ 0.85
CLSTN1-202ENST00000377298 FAM227BQ96M60 508 aa20.34■□□□□ 0.85
CLSTN1-202ENST00000377298 DEXIO95424 95 aa20.33■□□□□ 0.85
CLSTN1-202ENST00000377298 XRCC6P12956 609 aaKnown RBP eCLIP20.33■□□□□ 0.85
CLSTN1-202ENST00000377298 GBP2P32456 591 aaPredicted RBP20.33■□□□□ 0.85
CLSTN1-202ENST00000377298 GJA3Q9Y6H8 435 aa20.33■□□□□ 0.85
CLSTN1-202ENST00000377298 FERMT2Q96AC1 680 aa20.33■□□□□ 0.85
CLSTN1-202ENST00000377298 TNNT1P13805 278 aa20.33■□□□□ 0.84
CLSTN1-202ENST00000377298 VTI1AQ96AJ9 217 aa20.33■□□□□ 0.84
CLSTN1-202ENST00000377298 SPAG5Q96R06 1193 aa20.33■□□□□ 0.84
CLSTN1-202ENST00000377298 CRACR2AQ9BSW2 395 aa20.33■□□□□ 0.84
CLSTN1-202ENST00000377298 ARHGEF10LQ9HCE6 1279 aa20.33■□□□□ 0.84
CLSTN1-202ENST00000377298 TRMT1Q9NXH9 659 aaKnown RBP20.33■□□□□ 0.84
CLSTN1-202ENST00000377298 ZBTB38Q8NAP3 1195 aaPredicted RBP20.33■□□□□ 0.84
CLSTN1-202ENST00000377298 MCM7P33993 719 aa20.32■□□□□ 0.84
CLSTN1-202ENST00000377298 FAM193AP78312 1265 aa20.32■□□□□ 0.84
CLSTN1-202ENST00000377298 PDCL2Q8N4E4 241 aa20.32■□□□□ 0.84
CLSTN1-202ENST00000377298 TMCO3Q6UWJ1 677 aa20.32■□□□□ 0.84
CLSTN1-202ENST00000377298 TSPYL1Q9H0U9 437 aa20.32■□□□□ 0.84
CLSTN1-202ENST00000377298 PCCAP05165 728 aaPredicted RBP20.32■□□□□ 0.84
CLSTN1-202ENST00000377298 ZAP70P43403 619 aa20.32■□□□□ 0.84
CLSTN1-202ENST00000377298 PPP2R5BQ15173 497 aa20.32■□□□□ 0.84
CLSTN1-202ENST00000377298 TAX1BP1Q86VP1 789 aa20.32■□□□□ 0.84
CLSTN1-202ENST00000377298 HOOK2Q96ED9 719 aa20.32■□□□□ 0.84
CLSTN1-202ENST00000377298 IBTKQ9P2D0 1353 aaPredicted RBP20.32■□□□□ 0.84
CLSTN1-202ENST00000377298 CLASP1Q7Z460 1538 aa20.32■□□□□ 0.84
CLSTN1-202ENST00000377298 AKR1B10O60218 316 aa20.32■□□□□ 0.84
CLSTN1-202ENST00000377298 SYT1P21579 422 aa20.32■□□□□ 0.84
CLSTN1-202ENST00000377298 RILPL1Q5EBL4 403 aa20.32■□□□□ 0.84
CLSTN1-202ENST00000377298 PLEKHF1Q96S99 279 aa20.32■□□□□ 0.84
CLSTN1-202ENST00000377298 SNX14Q9Y5W7 946 aa20.32■□□□□ 0.84
CLSTN1-202ENST00000377298 EIF6P56537 245 aaKnown RBP20.31■□□□□ 0.84
CLSTN1-202ENST00000377298 IQUBQ8NA54 791 aa20.31■□□□□ 0.84
CLSTN1-202ENST00000377298 AATFQ9NY61 560 aaKnown RBP eCLIP20.31■□□□□ 0.84
CLSTN1-202ENST00000377298 CLCN1P35523 988 aa20.31■□□□□ 0.84
CLSTN1-202ENST00000377298 CCDC102AQ96A19 550 aa20.31■□□□□ 0.84
CLSTN1-202ENST00000377298 GLT8D2Q9H1C3 349 aa20.31■□□□□ 0.84
CLSTN1-202ENST00000377298 ANKRD62A6NC57 917 aa20.31■□□□□ 0.84
CLSTN1-202ENST00000377298 EHBP1Q8NDI1 1231 aa20.31■□□□□ 0.84
CLSTN1-202ENST00000377298 TBC1D5Q92609 795 aa20.31■□□□□ 0.84
CLSTN1-202ENST00000377298 TRPC5Q9UL62 973 aaPredicted RBP20.31■□□□□ 0.84
CLSTN1-202ENST00000377298 KDM2BQ8NHM5 1336 aa20.31■□□□□ 0.84
CLSTN1-202ENST00000377298 CPA1P15085 419 aa20.31■□□□□ 0.84
CLSTN1-202ENST00000377298 KDM5CP41229 1560 aa20.31■□□□□ 0.84
CLSTN1-202ENST00000377298 SEC24BO95487 1268 aa20.3■□□□□ 0.84
CLSTN1-202ENST00000377298 TTLL7Q6ZT98 887 aa20.3■□□□□ 0.84
CLSTN1-202ENST00000377298 CCDC24Q8N4L8 307 aa20.3■□□□□ 0.84
CLSTN1-202ENST00000377298 DRC1Q96MC2 740 aa20.3■□□□□ 0.84
CLSTN1-202ENST00000377298 SYNMO15061 1565 aa20.3■□□□□ 0.84
CLSTN1-202ENST00000377298 BEND3Q5T5X7 828 aa20.3■□□□□ 0.84
CLSTN1-202ENST00000377298 IFI16Q16666 785 aaKnown RBP20.3■□□□□ 0.84
CLSTN1-202ENST00000377298 PICK1Q9NRD5 415 aa20.3■□□□□ 0.84
CLSTN1-202ENST00000377298 PRDM15P57071 1507 aaPredicted RBP20.3■□□□□ 0.84
CLSTN1-202ENST00000377298 ZNF532Q9HCE3 1301 aa20.3■□□□□ 0.84
CLSTN1-202ENST00000377298 LOC102724428A0A0B4J2F2 783 aa20.3■□□□□ 0.84
CLSTN1-202ENST00000377298 NOP2P46087 812 aaKnown RBP20.3■□□□□ 0.84
CLSTN1-202ENST00000377298 SIK1P57059 783 aa20.3■□□□□ 0.84
CLSTN1-202ENST00000377298 NAA15Q9BXJ9 866 aaKnown RBP20.3■□□□□ 0.84
CLSTN1-202ENST00000377298 SHROOM2Q13796 1616 aa20.29■□□□□ 0.84
CLSTN1-202ENST00000377298 WDR17Q8IZU2 1322 aa20.29■□□□□ 0.84
CLSTN1-202ENST00000377298 BICDL2A1A5D9 508 aa20.29■□□□□ 0.84
CLSTN1-202ENST00000377298 TMCO5BA8MYB1 307 aa20.29■□□□□ 0.84
CLSTN1-202ENST00000377298 FAM13AO94988 1023 aa20.29■□□□□ 0.84
CLSTN1-202ENST00000377298 DNA2P51530 1060 aa20.29■□□□□ 0.84
CLSTN1-202ENST00000377298 PUF60Q9UHX1 559 aaKnown RBP20.29■□□□□ 0.84
CLSTN1-202ENST00000377298 MAP3K15Q6ZN16 1313 aa20.29■□□□□ 0.84
CLSTN1-202ENST00000377298 ABCC3O15438 1527 aa20.29■□□□□ 0.84
CLSTN1-202ENST00000377298 DSCC1Q9BVC3 393 aa20.29■□□□□ 0.84
CLSTN1-202ENST00000377298 HS2ST1Q7LGA3 356 aa20.28■□□□□ 0.84
CLSTN1-202ENST00000377298 CYLC1P35663 651 aaPredicted RBP20.28■□□□□ 0.84
CLSTN1-202ENST00000377298 C16orf45Q96MC5 204 aaPredicted RBP20.28■□□□□ 0.84
CLSTN1-202ENST00000377298 DNAJC25Q9H1X3 360 aa20.28■□□□□ 0.84
CLSTN1-202ENST00000377298 GPCPD1Q9NPB8 672 aa20.28■□□□□ 0.84
CLSTN1-202ENST00000377298 KDM6BO15054 1643 aa20.28■□□□□ 0.84
CLSTN1-202ENST00000377298 AOPEPQ8N6M6 819 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms