RNA–Protein interactions for RNA: ENST00000376899.8

YIF1A-202, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 1,042 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-202ENST00000376899 GCC1Q96CN9 775 aa27.74■■■□□ 2.03
YIF1A-202ENST00000376899 GGA3Q9NZ52 723 aa27.74■■■□□ 2.03
YIF1A-202ENST00000376899 TRPM7Q96QT4 1865 aa27.72■■■□□ 2.03
YIF1A-202ENST00000376899 SPDYE2BA6NHP3 402 aa27.72■■■□□ 2.03
YIF1A-202ENST00000376899 LDHBP07195 334 aaKnown RBP27.72■■■□□ 2.03
YIF1A-202ENST00000376899 SPDYE6P0CI01 402 aa27.72■■■□□ 2.03
YIF1A-202ENST00000376899 CRKP46108 304 aa27.72■■■□□ 2.03
YIF1A-202ENST00000376899 RWDD1Q9H446 243 aaPredicted RBP27.72■■■□□ 2.03
YIF1A-202ENST00000376899 PCDHAC2Q9Y5I4 1007 aa27.72■■■□□ 2.03
YIF1A-202ENST00000376899 MAST2Q6P0Q8 1798 aa27.71■■■□□ 2.03
YIF1A-202ENST00000376899 ANGEL2Q5VTE6 544 aaKnown RBP27.71■■■□□ 2.03
YIF1A-202ENST00000376899 CDC37L1Q7L3B6 337 aa27.71■■■□□ 2.03
YIF1A-202ENST00000376899 MYH2Q9UKX2 1941 aa27.71■■■□□ 2.03
YIF1A-202ENST00000376899 SPTY2D1Q68D10 685 aaPredicted RBP27.7■■■□□ 2.02
YIF1A-202ENST00000376899 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.7■■■□□ 2.02
YIF1A-202ENST00000376899 TEKT1Q969V4 418 aa27.7■■■□□ 2.02
YIF1A-202ENST00000376899 DCPSQ96C86 337 aaKnown RBP27.7■■■□□ 2.02
YIF1A-202ENST00000376899 PRMT6Q96LA8 375 aaPredicted RBP27.7■■■□□ 2.02
YIF1A-202ENST00000376899 MYO5AQ9Y4I1 1855 aaKnown RBP27.7■■■□□ 2.02
YIF1A-202ENST00000376899 DOCK2Q92608 1830 aa27.69■■■□□ 2.02
YIF1A-202ENST00000376899 HSPA6P17066 643 aa27.69■■■□□ 2.02
YIF1A-202ENST00000376899 HHIPL2Q6UWX4 724 aa27.69■■■□□ 2.02
YIF1A-202ENST00000376899 SMC5Q8IY18 1101 aa27.69■■■□□ 2.02
YIF1A-202ENST00000376899 ZDHHC15Q96MV8 337 aa27.69■■■□□ 2.02
YIF1A-202ENST00000376899 GLIS2Q9BZE0 524 aaPredicted RBP27.69■■■□□ 2.02
YIF1A-202ENST00000376899 ABCF2Q9UG63 623 aa27.69■■■□□ 2.02
YIF1A-202ENST00000376899 IGHDP01880 384 aa27.68■■■□□ 2.02
YIF1A-202ENST00000376899 ZAP70P43403 619 aa27.68■■■□□ 2.02
YIF1A-202ENST00000376899 SNRKQ9NRH2 765 aa27.68■■■□□ 2.02
YIF1A-202ENST00000376899 AOX1Q06278 1338 aa27.67■■■□□ 2.02
YIF1A-202ENST00000376899 CYP2E1P05181 493 aaPredicted RBP27.67■■■□□ 2.02
YIF1A-202ENST00000376899 CENPBP07199 599 aaPredicted RBP27.67■■■□□ 2.02
YIF1A-202ENST00000376899 RBM5P52756 815 aaKnown RBP eCLIP27.67■■■□□ 2.02
YIF1A-202ENST00000376899 ERICH6Q7L0X2 663 aa27.67■■■□□ 2.02
YIF1A-202ENST00000376899 KRT26Q7Z3Y9 468 aa27.67■■■□□ 2.02
YIF1A-202ENST00000376899 IGSF3O75054 1194 aa27.66■■■□□ 2.02
YIF1A-202ENST00000376899 TBC1D9Q6ZT07 1266 aa27.66■■■□□ 2.02
YIF1A-202ENST00000376899 TRAF5O00463 557 aa27.65■■■□□ 2.02
YIF1A-202ENST00000376899 MYO1BO43795 1136 aa27.65■■■□□ 2.02
YIF1A-202ENST00000376899 ATP5JP18859 108 aa27.65■■■□□ 2.02
YIF1A-202ENST00000376899 APLP1P51693 650 aa27.65■■■□□ 2.02
YIF1A-202ENST00000376899 DIXDC1Q155Q3 683 aa27.65■■■□□ 2.02
YIF1A-202ENST00000376899 APOBEC3HQ6NTF7 200 aaKnown RBP27.65■■■□□ 2.02
YIF1A-202ENST00000376899 USP48Q86UV5 1035 aa27.65■■■□□ 2.02
YIF1A-202ENST00000376899 DZIP1Q86YF9 867 aaKnown RBP27.65■■■□□ 2.02
YIF1A-202ENST00000376899 APOBEC3FQ8IUX4 373 aaKnown RBP27.65■■■□□ 2.02
YIF1A-202ENST00000376899 SULF1Q8IWU6 871 aa27.65■■■□□ 2.02
YIF1A-202ENST00000376899 DAGLAQ9Y4D2 1042 aa27.65■■■□□ 2.02
YIF1A-202ENST00000376899 GAKO14976 1311 aa27.65■■■□□ 2.02
YIF1A-202ENST00000376899 ADM5C9JUS6 153 aa27.64■■■□□ 2.02
YIF1A-202ENST00000376899 SPDYE2Q495Y8 402 aa27.64■■■□□ 2.02
YIF1A-202ENST00000376899 ZNF384Q8TF68 577 aa27.64■■■□□ 2.02
YIF1A-202ENST00000376899 FAM163AQ96GL9 167 aaPredicted RBP27.64■■■□□ 2.02
YIF1A-202ENST00000376899 BCL11AQ9H165 835 aa27.64■■■□□ 2.02
YIF1A-202ENST00000376899 MECOMQ03112 1051 aa27.63■■■□□ 2.01
YIF1A-202ENST00000376899 FMR1Q06787 632 aaKnown RBP eCLIP27.63■■■□□ 2.01
YIF1A-202ENST00000376899 ANKRD45Q5TZF3 282 aa27.63■■■□□ 2.01
YIF1A-202ENST00000376899 PIH1D3Q9NQM4 214 aaKnown RBP27.63■■■□□ 2.01
YIF1A-202ENST00000376899 ZNF70Q9UC06 446 aaPredicted RBP27.63■■■□□ 2.01
YIF1A-202ENST00000376899 SLF2Q8IX21 1173 aa27.62■■■□□ 2.01
YIF1A-202ENST00000376899 NSUN4Q96CB9 384 aaKnown RBP27.62■■■□□ 2.01
YIF1A-202ENST00000376899 TDRD3Q9H7E2 651 aaKnown RBP27.62■■■□□ 2.01
YIF1A-202ENST00000376899 CLRN2A0PK11 232 aa27.61■■■□□ 2.01
YIF1A-202ENST00000376899 ECHDC1Q9NTX5 307 aa27.61■■■□□ 2.01
YIF1A-202ENST00000376899 RAI14Q9P0K7 980 aa27.61■■■□□ 2.01
YIF1A-202ENST00000376899 LRP2BPQ9P2M1 347 aa27.61■■■□□ 2.01
YIF1A-202ENST00000376899 NDUFB9Q9Y6M9 179 aa27.61■■■□□ 2.01
YIF1A-202ENST00000376899 SALL3Q9BXA9 1300 aa27.61■■■□□ 2.01
YIF1A-202ENST00000376899 GPATCH3Q96I76 525 aa27.6■■■□□ 2.01
YIF1A-202ENST00000376899 ANTXR1Q9H6X2 564 aa27.6■■■□□ 2.01
YIF1A-202ENST00000376899 MROH7-TTC4A0A0A0MT08 1334 aa27.6■■■□□ 2.01
YIF1A-202ENST00000376899 GSTO1P78417 241 aa27.59■■■□□ 2.01
YIF1A-202ENST00000376899 DLK2Q6UY11 383 aa27.59■■■□□ 2.01
YIF1A-202ENST00000376899 CDCA5Q96FF9 252 aa27.59■■■□□ 2.01
YIF1A-202ENST00000376899 HAUS7Q99871 368 aa27.59■■■□□ 2.01
YIF1A-202ENST00000376899 BOLA2Q9H3K6 86 aa27.59■■■□□ 2.01
YIF1A-202ENST00000376899 ZBTB47Q9UFB7 747 aaPredicted RBP27.59■■■□□ 2.01
YIF1A-202ENST00000376899 TTF1Q15361 905 aaPredicted RBP27.58■■■□□ 2.01
YIF1A-202ENST00000376899 CREBZFQ9NS37 354 aa27.58■■■□□ 2.01
YIF1A-202ENST00000376899 SCAF8Q9UPN6 1271 aaKnown RBP27.58■■■□□ 2.01
YIF1A-202ENST00000376899 PPP2R3BQ9Y5P8 575 aa27.58■■■□□ 2.01
YIF1A-202ENST00000376899 TTC41PQ6P2S7 1318 aa27.58■■■□□ 2.01
YIF1A-202ENST00000376899 TMEM88BA6NKF7 163 aa27.57■■■□□ 2
YIF1A-202ENST00000376899 LDHCP07864 332 aa27.57■■■□□ 2
YIF1A-202ENST00000376899 FKBP1CQ5VVH2 108 aa27.57■■■□□ 2
YIF1A-202ENST00000376899 CST9Q5W186 159 aa27.57■■■□□ 2
YIF1A-202ENST00000376899 OTUD7AQ8TE49 926 aaPredicted RBP27.57■■■□□ 2
YIF1A-202ENST00000376899 VEZTQ9HBM0 779 aa27.57■■■□□ 2
YIF1A-202ENST00000376899 GPR75-ASB3A0A0A6YYF3 556 aa27.56■■■□□ 2
YIF1A-202ENST00000376899 TNFAIP1Q13829 316 aa27.56■■■□□ 2
YIF1A-202ENST00000376899 TMED8Q6PL24 325 aaPredicted RBP27.56■■■□□ 2
YIF1A-202ENST00000376899 DNAJC2Q99543 621 aaKnown RBP27.56■■■□□ 2
YIF1A-202ENST00000376899 DEFB129Q9H1M3 183 aa27.56■■■□□ 2
YIF1A-202ENST00000376899 MYH7P12883 1935 aa27.56■■■□□ 2
YIF1A-202ENST00000376899 CELF2O95319 508 aaKnown RBP27.55■■■□□ 2
YIF1A-202ENST00000376899 MX1P20591 662 aa27.55■■■□□ 2
YIF1A-202ENST00000376899 NUCB1Q02818 461 aa27.55■■■□□ 2
YIF1A-202ENST00000376899 NAA16Q6N069 864 aaPredicted RBP27.55■■■□□ 2
YIF1A-202ENST00000376899 CDC42EP5Q6NZY7 148 aa27.55■■■□□ 2
YIF1A-202ENST00000376899 PAG1Q9NWQ8 432 aa27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms