RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 ZNF70Q9UC06 446 aaPredicted RBP18.46■□□□□ 0.55
HDAC6-204ENST00000376643 CRKP46108 304 aa18.45■□□□□ 0.54
HDAC6-204ENST00000376643 ARAP2Q8WZ64 1704 aa18.45■□□□□ 0.54
HDAC6-204ENST00000376643 SLC5A1P13866 664 aa18.44■□□□□ 0.54
HDAC6-204ENST00000376643 LRRC24Q50LG9 513 aa18.44■□□□□ 0.54
HDAC6-204ENST00000376643 NBPF12Q5TAG4 269 aaPredicted RBP18.44■□□□□ 0.54
HDAC6-204ENST00000376643 FBXO46Q6PJ61 603 aaPredicted RBP18.44■□□□□ 0.54
HDAC6-204ENST00000376643 IFNL1Q8IU54 200 aa18.44■□□□□ 0.54
HDAC6-204ENST00000376643 VGLL2Q8N8G2 317 aa18.44■□□□□ 0.54
HDAC6-204ENST00000376643 API5Q9BZZ5 524 aaKnown RBP18.44■□□□□ 0.54
HDAC6-204ENST00000376643 USP44Q9H0E7 712 aa18.44■□□□□ 0.54
HDAC6-204ENST00000376643 SSC5DA1L4H1 1573 aa18.43■□□□□ 0.54
HDAC6-204ENST00000376643 EYA2O00167 538 aa18.43■□□□□ 0.54
HDAC6-204ENST00000376643 WDHD1O75717 1129 aaPredicted RBP18.43■□□□□ 0.54
HDAC6-204ENST00000376643 UBTFL1P0CB47 393 aaPredicted RBP18.43■□□□□ 0.54
HDAC6-204ENST00000376643 CHAF1AQ13111 956 aaPredicted RBP18.43■□□□□ 0.54
HDAC6-204ENST00000376643 LPIN2Q92539 896 aa18.43■□□□□ 0.54
HDAC6-204ENST00000376643 TDRD3Q9H7E2 651 aaKnown RBP18.43■□□□□ 0.54
HDAC6-204ENST00000376643 HPS5Q9UPZ3 1129 aa18.43■□□□□ 0.54
HDAC6-204ENST00000376643 PCDHAC2Q9Y5I4 1007 aa18.43■□□□□ 0.54
HDAC6-204ENST00000376643 CSADQ9Y600 493 aa18.43■□□□□ 0.54
HDAC6-204ENST00000376643 FKBP1CQ5VVH2 108 aa18.42■□□□□ 0.54
HDAC6-204ENST00000376643 WDR66Q8TBY9 1149 aa18.42■□□□□ 0.54
HDAC6-204ENST00000376643 GNL3LQ9NVN8 582 aaKnown RBP18.42■□□□□ 0.54
HDAC6-204ENST00000376643 USP2O75604 605 aaPredicted RBP18.41■□□□□ 0.54
HDAC6-204ENST00000376643 ARHGEF6Q15052 776 aa18.41■□□□□ 0.54
HDAC6-204ENST00000376643 ERO1AQ96HE7 468 aa18.41■□□□□ 0.54
HDAC6-204ENST00000376643 CLMNQ96JQ2 1002 aa18.41■□□□□ 0.54
HDAC6-204ENST00000376643 ZDHHC15Q96MV8 337 aa18.41■□□□□ 0.54
HDAC6-204ENST00000376643 TCP10L2B9ZVM9 353 aa18.4■□□□□ 0.54
HDAC6-204ENST00000376643 CCER2I3L3R5 266 aa18.4■□□□□ 0.54
HDAC6-204ENST00000376643 CIAO1O76071 339 aa18.4■□□□□ 0.54
HDAC6-204ENST00000376643 FAM83AQ86UY5 434 aa18.4■□□□□ 0.54
HDAC6-204ENST00000376643 FGFR2P21802 821 aa18.39■□□□□ 0.53
HDAC6-204ENST00000376643 BCAMP50895 628 aa18.39■□□□□ 0.53
HDAC6-204ENST00000376643 MAP3K9P80192 1104 aa18.39■□□□□ 0.53
HDAC6-204ENST00000376643 DCAF15Q66K64 600 aa18.39■□□□□ 0.53
HDAC6-204ENST00000376643 HHIPL2Q6UWX4 724 aa18.39■□□□□ 0.53
HDAC6-204ENST00000376643 OPTNQ96CV9 577 aa18.39■□□□□ 0.53
HDAC6-204ENST00000376643 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.39■□□□□ 0.53
HDAC6-204ENST00000376643 CEP126Q9P2H0 1117 aa18.39■□□□□ 0.53
HDAC6-204ENST00000376643 FZD1Q9UP38 647 aa18.39■□□□□ 0.53
HDAC6-204ENST00000376643 IQSEC3Q9UPP2 1182 aaPredicted RBP18.39■□□□□ 0.53
HDAC6-204ENST00000376643 TESPA1A2RU30 521 aaPredicted RBP18.38■□□□□ 0.53
HDAC6-204ENST00000376643 SEMA3EO15041 775 aa18.38■□□□□ 0.53
HDAC6-204ENST00000376643 GTF2A2P52657 109 aa18.38■□□□□ 0.53
HDAC6-204ENST00000376643 SOX10P56693 466 aa18.38■□□□□ 0.53
HDAC6-204ENST00000376643 TRMT2AQ8IZ69 625 aaKnown RBP18.38■□□□□ 0.53
HDAC6-204ENST00000376643 TEPSINQ96N21 525 aa18.38■□□□□ 0.53
HDAC6-204ENST00000376643 RPAP1Q9BWH6 1393 aaPredicted RBP18.38■□□□□ 0.53
HDAC6-204ENST00000376643 LAMB1P07942 1786 aa18.37■□□□□ 0.53
HDAC6-204ENST00000376643 ZGPATQ8N5A5 531 aaKnown RBP18.37■□□□□ 0.53
HDAC6-204ENST00000376643 KLHDC4Q8TBB5 520 aa18.37■□□□□ 0.53
HDAC6-204ENST00000376643 TMEM39BQ9GZU3 492 aa18.37■□□□□ 0.53
HDAC6-204ENST00000376643 ELP3Q9H9T3 547 aa18.37■□□□□ 0.53
HDAC6-204ENST00000376643 IGF2BP3O00425 579 aaKnown RBP eCLIP18.36■□□□□ 0.53
HDAC6-204ENST00000376643 IL15P40933 162 aaPredicted RBP18.36■□□□□ 0.53
HDAC6-204ENST00000376643 RFX5P48382 616 aaPredicted RBP18.36■□□□□ 0.53
HDAC6-204ENST00000376643 AOX1Q06278 1338 aa18.36■□□□□ 0.53
HDAC6-204ENST00000376643 ATP2B3Q16720 1220 aa18.36■□□□□ 0.53
HDAC6-204ENST00000376643 INTS3Q68E01 1043 aaKnown RBP18.36■□□□□ 0.53
HDAC6-204ENST00000376643 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.36■□□□□ 0.53
HDAC6-204ENST00000376643 ARHGAP45Q92619 1136 aa18.36■□□□□ 0.53
HDAC6-204ENST00000376643 ZCCHC17Q9NP64 241 aaKnown RBP18.36■□□□□ 0.53
HDAC6-204ENST00000376643 NOB1Q9ULX3 412 aaKnown RBP18.36■□□□□ 0.53
HDAC6-204ENST00000376643 TRIM17Q9Y577 477 aa18.36■□□□□ 0.53
HDAC6-204ENST00000376643 ZBTB22O15209 634 aa18.35■□□□□ 0.53
HDAC6-204ENST00000376643 VGLL4Q14135 290 aa18.35■□□□□ 0.53
HDAC6-204ENST00000376643 CDCA7LQ96GN5 454 aa18.35■□□□□ 0.53
HDAC6-204ENST00000376643 ZFYVE28Q9HCC9 887 aa18.35■□□□□ 0.53
HDAC6-204ENST00000376643 DENND2AQ9ULE3 1009 aa18.35■□□□□ 0.53
HDAC6-204ENST00000376643 IPO8O15397 1037 aaKnown RBP18.34■□□□□ 0.53
HDAC6-204ENST00000376643 GNAI3P08754 354 aa18.34■□□□□ 0.53
HDAC6-204ENST00000376643 CRHR2Q13324 411 aa18.34■□□□□ 0.53
HDAC6-204ENST00000376643 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.34■□□□□ 0.53
HDAC6-204ENST00000376643 ERO1BQ86YB8 467 aa18.34■□□□□ 0.53
HDAC6-204ENST00000376643 SALL1Q9NSC2 1324 aa18.33■□□□□ 0.53
HDAC6-204ENST00000376643 CCL15-CCL14A0A0B4J2E2 113 aa18.33■□□□□ 0.52
HDAC6-204ENST00000376643 SPDYE5A6NIY4 337 aa18.33■□□□□ 0.52
HDAC6-204ENST00000376643 LDHBP07195 334 aaKnown RBP18.33■□□□□ 0.52
HDAC6-204ENST00000376643 CETPP11597 493 aa18.33■□□□□ 0.52
HDAC6-204ENST00000376643 SP3Q02447 781 aa18.33■□□□□ 0.52
HDAC6-204ENST00000376643 CCL15Q16663 113 aa18.33■□□□□ 0.52
HDAC6-204ENST00000376643 APOBEC3HQ6NTF7 200 aaKnown RBP18.33■□□□□ 0.52
HDAC6-204ENST00000376643 ATG9AQ7Z3C6 839 aa18.33■□□□□ 0.52
HDAC6-204ENST00000376643 SLF2Q8IX21 1173 aa18.33■□□□□ 0.52
HDAC6-204ENST00000376643 WRNIP1Q96S55 665 aa18.33■□□□□ 0.52
HDAC6-204ENST00000376643 ZNF341Q9BYN7 854 aa18.33■□□□□ 0.52
HDAC6-204ENST00000376643 GJA5P36382 358 aa18.32■□□□□ 0.52
HDAC6-204ENST00000376643 TAF1CQ15572 869 aaPredicted RBP18.32■□□□□ 0.52
HDAC6-204ENST00000376643 GRIK5Q16478 980 aa18.32■□□□□ 0.52
HDAC6-204ENST00000376643 OTOP1Q7RTM1 612 aa18.32■□□□□ 0.52
HDAC6-204ENST00000376643 OTUD5Q96G74 571 aa18.32■□□□□ 0.52
HDAC6-204ENST00000376643 MS4A4AQ96JQ5 239 aa18.32■□□□□ 0.52
HDAC6-204ENST00000376643 SIL1Q9H173 461 aa18.32■□□□□ 0.52
HDAC6-204ENST00000376643 R3HDMLQ9H3Y0 253 aa18.32■□□□□ 0.52
HDAC6-204ENST00000376643 EFCC1Q9HA90 598 aa18.32■□□□□ 0.52
HDAC6-204ENST00000376643 COPRSQ9NQ92 184 aa18.32■□□□□ 0.52
HDAC6-204ENST00000376643 AKAP2Q9Y2D5 859 aa18.32■□□□□ 0.52
HDAC6-204ENST00000376643 SNAPC2Q13487 334 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms