RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 GPAA1O43292 621 aa19.14■□□□□ 0.65
VARS-215ENST00000375663 MYSM1Q5VVJ2 828 aa19.14■□□□□ 0.65
VARS-215ENST00000375663 FAM114A1Q8IWE2 563 aa19.14■□□□□ 0.65
VARS-215ENST00000375663 ZNF496Q96IT1 587 aaPredicted RBP19.14■□□□□ 0.65
VARS-215ENST00000375663 RSPH14Q9UHP6 348 aa19.14■□□□□ 0.65
VARS-215ENST00000375663 IVLP07476 585 aa19.13■□□□□ 0.65
VARS-215ENST00000375663 AMPD3Q01432 767 aa19.13■□□□□ 0.65
VARS-215ENST00000375663 CABLES1Q8TDN4 633 aa19.13■□□□□ 0.65
VARS-215ENST00000375663 GUCA1BQ9UMX6 200 aa19.13■□□□□ 0.65
VARS-215ENST00000375663 METP08581 1390 aa19.13■□□□□ 0.65
VARS-215ENST00000375663 TAF5LO75529 589 aa19.13■□□□□ 0.65
VARS-215ENST00000375663 DSCC1Q9BVC3 393 aa19.13■□□□□ 0.65
VARS-215ENST00000375663 PSMA7O14818 248 aa19.13■□□□□ 0.65
VARS-215ENST00000375663 ERCC6LQ2NKX8 1250 aa19.13■□□□□ 0.65
VARS-215ENST00000375663 RILPL1Q5EBL4 403 aa19.13■□□□□ 0.65
VARS-215ENST00000375663 TAX1BP1Q86VP1 789 aa19.13■□□□□ 0.65
VARS-215ENST00000375663 NFE2L3Q9Y4A8 694 aa19.13■□□□□ 0.65
VARS-215ENST00000375663 ZFYVE16Q7Z3T8 1539 aa19.12■□□□□ 0.65
VARS-215ENST00000375663 PFKFB2O60825 505 aa19.12■□□□□ 0.65
VARS-215ENST00000375663 PDE4BQ07343 736 aa19.12■□□□□ 0.65
VARS-215ENST00000375663 HLTFQ14527 1009 aaKnown RBP eCLIP19.12■□□□□ 0.65
VARS-215ENST00000375663 SPECC1Q5M775 1068 aa19.12■□□□□ 0.65
VARS-215ENST00000375663 CACTINQ8WUQ7 758 aaKnown RBP19.12■□□□□ 0.65
VARS-215ENST00000375663 CDC5LQ99459 802 aaKnown RBP19.12■□□□□ 0.65
VARS-215ENST00000375663 KAT14Q9H8E8 782 aa19.12■□□□□ 0.65
VARS-215ENST00000375663 CPSF1Q10570 1443 aaKnown RBP19.12■□□□□ 0.65
VARS-215ENST00000375663 CDK12Q9NYV4 1490 aaPredicted RBP19.12■□□□□ 0.65
VARS-215ENST00000375663 TUBB4BP68371 445 aa19.12■□□□□ 0.65
VARS-215ENST00000375663 TMEM266Q2M3C6 531 aa19.12■□□□□ 0.65
VARS-215ENST00000375663 CALML4Q96GE6 196 aa19.12■□□□□ 0.65
VARS-215ENST00000375663 KRT40Q6A162 431 aa19.12■□□□□ 0.65
VARS-215ENST00000375663 CNGA4Q8IV77 575 aa19.12■□□□□ 0.65
VARS-215ENST00000375663 FAM89AQ96GI7 184 aa19.12■□□□□ 0.65
VARS-215ENST00000375663 ZKSCAN3Q9BRR0 538 aa19.12■□□□□ 0.65
VARS-215ENST00000375663 IGSF1Q8N6C5 1336 aa19.12■□□□□ 0.65
VARS-215ENST00000375663 POLR2DO15514 142 aaKnown RBP19.11■□□□□ 0.65
VARS-215ENST00000375663 IGSF22Q8N9C0 903 aa19.11■□□□□ 0.65
VARS-215ENST00000375663 TMEM87AQ8NBN3 555 aa19.11■□□□□ 0.65
VARS-215ENST00000375663 CABP5Q9NP86 173 aa19.11■□□□□ 0.65
VARS-215ENST00000375663 KDRP35968 1356 aa19.11■□□□□ 0.65
VARS-215ENST00000375663 CYP2E1P05181 493 aaPredicted RBP19.11■□□□□ 0.65
VARS-215ENST00000375663 MAGEB6Q8N7X4 407 aa19.11■□□□□ 0.65
VARS-215ENST00000375663 PI4K2BQ8TCG2 481 aa19.11■□□□□ 0.65
VARS-215ENST00000375663 DRC1Q96MC2 740 aa19.11■□□□□ 0.65
VARS-215ENST00000375663 CUTAO60888 179 aa19.11■□□□□ 0.65
VARS-215ENST00000375663 CCDC96Q2M329 555 aa19.11■□□□□ 0.65
VARS-215ENST00000375663 PHKBQ93100 1093 aa19.11■□□□□ 0.65
VARS-215ENST00000375663 XAGE2Q96GT9 111 aa19.11■□□□□ 0.65
VARS-215ENST00000375663 TMEM87BQ96K49 555 aa19.11■□□□□ 0.65
VARS-215ENST00000375663 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.11■□□□□ 0.65
VARS-215ENST00000375663 NAA15Q9BXJ9 866 aaKnown RBP19.11■□□□□ 0.65
VARS-215ENST00000375663 SLC4A8Q2Y0W8 1093 aa19.11■□□□□ 0.65
VARS-215ENST00000375663 DIS3L2Q8IYB7 885 aaKnown RBP19.11■□□□□ 0.65
VARS-215ENST00000375663 ZNF274Q96GC6 653 aaPredicted RBP19.11■□□□□ 0.65
VARS-215ENST00000375663 MIGA1Q8NAN2 632 aa19.1■□□□□ 0.65
VARS-215ENST00000375663 BBXQ8WY36 941 aaPredicted RBP19.1■□□□□ 0.65
VARS-215ENST00000375663 IQUBQ8NA54 791 aa19.1■□□□□ 0.65
VARS-215ENST00000375663 EXOC1Q9NV70 894 aa19.1■□□□□ 0.65
VARS-215ENST00000375663 TLR7Q9NYK1 1049 aaKnown RBP19.1■□□□□ 0.65
VARS-215ENST00000375663 CCDC40Q4G0X9 1142 aa19.1■□□□□ 0.65
VARS-215ENST00000375663 CCDC178Q5BJE1 867 aa19.1■□□□□ 0.65
VARS-215ENST00000375663 MLKLQ8NB16 471 aa19.1■□□□□ 0.65
VARS-215ENST00000375663 SLC52A2Q9HAB3 445 aa19.1■□□□□ 0.65
VARS-215ENST00000375663 PCDHA7Q9UN72 937 aa19.1■□□□□ 0.65
VARS-215ENST00000375663 KRT86O43790 486 aa19.09■□□□□ 0.65
VARS-215ENST00000375663 STX8Q9UNK0 236 aa19.09■□□□□ 0.65
VARS-215ENST00000375663 YEATS2Q9ULM3 1422 aa19.09■□□□□ 0.65
VARS-215ENST00000375663 TUBBP07437 444 aa19.09■□□□□ 0.65
VARS-215ENST00000375663 CCT6AP40227 531 aaKnown RBP19.09■□□□□ 0.65
VARS-215ENST00000375663 UBXN1Q04323 297 aa19.09■□□□□ 0.65
VARS-215ENST00000375663 SCRN1Q12765 414 aa19.09■□□□□ 0.65
VARS-215ENST00000375663 VAT1LQ9HCJ6 419 aa19.09■□□□□ 0.65
VARS-215ENST00000375663 ETF1P62495 437 aaKnown RBP19.09■□□□□ 0.65
VARS-215ENST00000375663 PROSER3Q2NL68 480 aa19.09■□□□□ 0.65
VARS-215ENST00000375663 MBD4O95243 580 aa19.09■□□□□ 0.65
VARS-215ENST00000375663 PFKFB1P16118 471 aa19.09■□□□□ 0.65
VARS-215ENST00000375663 MTX1Q13505 466 aa19.09■□□□□ 0.65
VARS-215ENST00000375663 RNF187Q5TA31 235 aaPredicted RBP19.09■□□□□ 0.65
VARS-215ENST00000375663 VPS36Q86VN1 386 aa19.09■□□□□ 0.65
VARS-215ENST00000375663 LUC7L2Q9Y383 392 aaKnown RBP19.09■□□□□ 0.65
VARS-215ENST00000375663 EFCAB6Q5THR3 1501 aa19.08■□□□□ 0.65
VARS-215ENST00000375663 PRR36Q9H6K5 1346 aa19.08■□□□□ 0.65
VARS-215ENST00000375663 MYO1BO43795 1136 aa19.08■□□□□ 0.65
VARS-215ENST00000375663 KRT2P35908 639 aa19.08■□□□□ 0.65
VARS-215ENST00000375663 CHMP4BP1P59074 171 aa19.08■□□□□ 0.65
VARS-215ENST00000375663 KRT83P78385 493 aa19.08■□□□□ 0.65
VARS-215ENST00000375663 HDXQ7Z353 690 aa19.08■□□□□ 0.65
VARS-215ENST00000375663 ZNF589Q86UQ0 364 aaPredicted RBP19.08■□□□□ 0.65
VARS-215ENST00000375663 CAPZA3Q96KX2 299 aa19.08■□□□□ 0.65
VARS-215ENST00000375663 MYL10Q9BUA6 226 aa19.08■□□□□ 0.65
VARS-215ENST00000375663 GNAT2P19087 354 aa19.08■□□□□ 0.64
VARS-215ENST00000375663 KIF5AQ12840 1032 aa19.08■□□□□ 0.64
VARS-215ENST00000375663 LAMC1P11047 1609 aa19.08■□□□□ 0.64
VARS-215ENST00000375663 TMEM2Q9UHN6 1383 aa19.08■□□□□ 0.64
VARS-215ENST00000375663 IRS4O14654 1257 aaPredicted RBP19.08■□□□□ 0.64
VARS-215ENST00000375663 WDHD1O75717 1129 aaPredicted RBP19.08■□□□□ 0.64
VARS-215ENST00000375663 CYP21A2P08686 494 aa19.08■□□□□ 0.64
VARS-215ENST00000375663 CCDC152Q4G0S7 254 aa19.08■□□□□ 0.64
VARS-215ENST00000375663 PNPLA6Q8IY17 1366 aa19.07■□□□□ 0.64
VARS-215ENST00000375663 HSPD1P10809 573 aaKnown RBP19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms