RNA–Protein interactions for RNA: ENST00000375641.6

C6orf48-206, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C6orf48, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-206ENST00000375641 ECM29Q5VYK3 1845 aa23.49■■□□□ 1.35
C6orf48-206ENST00000375641 TNRC18O15417 2968 aaPredicted RBP23.49■■□□□ 1.35
C6orf48-206ENST00000375641 IGF2BP3O00425 579 aaKnown RBP eCLIP23.49■■□□□ 1.35
C6orf48-206ENST00000375641 GJA5P36382 358 aa23.49■■□□□ 1.35
C6orf48-206ENST00000375641 CHAF1AQ13111 956 aaPredicted RBP23.49■■□□□ 1.35
C6orf48-206ENST00000375641 ANKRD13AQ8IZ07 590 aa23.49■■□□□ 1.35
C6orf48-206ENST00000375641 TEPSINQ96N21 525 aa23.49■■□□□ 1.35
C6orf48-206ENST00000375641 FRAT2O75474 233 aaPredicted RBP23.48■■□□□ 1.35
C6orf48-206ENST00000375641 FBXO46Q6PJ61 603 aaPredicted RBP23.48■■□□□ 1.35
C6orf48-206ENST00000375641 TBC1D22AQ8WUA7 517 aa23.48■■□□□ 1.35
C6orf48-206ENST00000375641 TCP10L2B9ZVM9 353 aa23.47■■□□□ 1.35
C6orf48-206ENST00000375641 BCAMP50895 628 aa23.47■■□□□ 1.35
C6orf48-206ENST00000375641 HDLBPQ00341 1268 aaKnown RBP23.47■■□□□ 1.35
C6orf48-206ENST00000375641 CDAN1Q8IWY9 1227 aa23.47■■□□□ 1.35
C6orf48-206ENST00000375641 ALDH1L2Q3SY69 923 aa23.46■■□□□ 1.35
C6orf48-206ENST00000375641 TMEM39BQ9GZU3 492 aa23.46■■□□□ 1.35
C6orf48-206ENST00000375641 FGFR2P21802 821 aa23.45■■□□□ 1.34
C6orf48-206ENST00000375641 CDCA7LQ96GN5 454 aa23.45■■□□□ 1.34
C6orf48-206ENST00000375641 ELP3Q9H9T3 547 aa23.45■■□□□ 1.34
C6orf48-206ENST00000375641 TESPA1A2RU30 521 aaPredicted RBP23.44■■□□□ 1.34
C6orf48-206ENST00000375641 RFX5P48382 616 aaPredicted RBP23.44■■□□□ 1.34
C6orf48-206ENST00000375641 TNNI2P48788 182 aa23.44■■□□□ 1.34
C6orf48-206ENST00000375641 PUM3Q15397 648 aaKnown RBP23.44■■□□□ 1.34
C6orf48-206ENST00000375641 OTUD7BQ6GQQ9 843 aa23.44■■□□□ 1.34
C6orf48-206ENST00000375641 PTPN18Q99952 460 aa23.44■■□□□ 1.34
C6orf48-206ENST00000375641 MRIQ9BWK5 157 aa23.44■■□□□ 1.34
C6orf48-206ENST00000375641 KIF16BQ96L93 1317 aa23.43■■□□□ 1.34
C6orf48-206ENST00000375641 EYA2O00167 538 aa23.43■■□□□ 1.34
C6orf48-206ENST00000375641 IFIT1P09914 478 aaKnown RBP23.43■■□□□ 1.34
C6orf48-206ENST00000375641 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.43■■□□□ 1.34
C6orf48-206ENST00000375641 TEKT1Q969V4 418 aa23.43■■□□□ 1.34
C6orf48-206ENST00000375641 OPTNQ96CV9 577 aa23.43■■□□□ 1.34
C6orf48-206ENST00000375641 MAP3K9P80192 1104 aa23.42■■□□□ 1.34
C6orf48-206ENST00000375641 TRMT2AQ8IZ69 625 aaKnown RBP23.42■■□□□ 1.34
C6orf48-206ENST00000375641 ZDHHC15Q96MV8 337 aa23.42■■□□□ 1.34
C6orf48-206ENST00000375641 SMC4Q9NTJ3 1288 aa23.42■■□□□ 1.34
C6orf48-206ENST00000375641 CACNB3P54284 484 aa23.41■■□□□ 1.34
C6orf48-206ENST00000375641 CRHR2Q13324 411 aa23.41■■□□□ 1.34
C6orf48-206ENST00000375641 MS4A4AQ96JQ5 239 aa23.41■■□□□ 1.34
C6orf48-206ENST00000375641 SUGT1Q9Y2Z0 365 aa23.41■■□□□ 1.34
C6orf48-206ENST00000375641 TRIM17Q9Y577 477 aa23.41■■□□□ 1.34
C6orf48-206ENST00000375641 SLC34A2O95436 690 aa23.4■■□□□ 1.34
C6orf48-206ENST00000375641 VGLL4Q14135 290 aa23.4■■□□□ 1.34
C6orf48-206ENST00000375641 APOBEC3HQ6NTF7 200 aaKnown RBP23.4■■□□□ 1.34
C6orf48-206ENST00000375641 OTOP1Q7RTM1 612 aa23.4■■□□□ 1.34
C6orf48-206ENST00000375641 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.4■■□□□ 1.341e-17■■□□□ 12
C6orf48-206ENST00000375641 CNKSR2Q8WXI2 1034 aa23.4■■□□□ 1.34
C6orf48-206ENST00000375641 LPIN2Q92539 896 aa23.4■■□□□ 1.34
C6orf48-206ENST00000375641 ARAP2Q8WZ64 1704 aa23.39■■□□□ 1.34
C6orf48-206ENST00000375641 SLC5A1P13866 664 aa23.39■■□□□ 1.33
C6orf48-206ENST00000375641 ATG9AQ7Z3C6 839 aa23.39■■□□□ 1.33
C6orf48-206ENST00000375641 HHIPL2Q6UWX4 724 aa23.38■■□□□ 1.33
C6orf48-206ENST00000375641 ERO1AQ96HE7 468 aa23.38■■□□□ 1.33
C6orf48-206ENST00000375641 TMOD2Q9NZR1 351 aa23.38■■□□□ 1.33
C6orf48-206ENST00000375641 CSADQ9Y600 493 aa23.38■■□□□ 1.33
C6orf48-206ENST00000375641 PDE4DIPQ5VU43 2346 aa23.38■■□□□ 1.33
C6orf48-206ENST00000375641 MAST3O60307 1309 aa23.37■■□□□ 1.33
C6orf48-206ENST00000375641 FKBP1CQ5VVH2 108 aa23.37■■□□□ 1.33
C6orf48-206ENST00000375641 FAM83AQ86UY5 434 aa23.37■■□□□ 1.33
C6orf48-206ENST00000375641 CD99L2Q8TCZ2 262 aa23.37■■□□□ 1.33
C6orf48-206ENST00000375641 BRI3BPQ8WY22 251 aa23.37■■□□□ 1.33
C6orf48-206ENST00000375641 NOB1Q9ULX3 412 aaKnown RBP23.37■■□□□ 1.33
C6orf48-206ENST00000375641 UBTFL1P0CB47 393 aaPredicted RBP23.36■■□□□ 1.33
C6orf48-206ENST00000375641 GTF2A2P52657 109 aa23.36■■□□□ 1.33
C6orf48-206ENST00000375641 WDR66Q8TBY9 1149 aa23.36■■□□□ 1.33
C6orf48-206ENST00000375641 LAMB1P07942 1786 aa23.36■■□□□ 1.33
C6orf48-206ENST00000375641 CT47B1P0C2W7 299 aaPredicted RBP23.35■■□□□ 1.33
C6orf48-206ENST00000375641 SP3Q02447 781 aa23.35■■□□□ 1.33
C6orf48-206ENST00000375641 OTUD5Q96G74 571 aa23.35■■□□□ 1.33
C6orf48-206ENST00000375641 SIL1Q9H173 461 aa23.35■■□□□ 1.33
C6orf48-206ENST00000375641 FBXO3Q9UK99 471 aa23.35■■□□□ 1.33
C6orf48-206ENST00000375641 CCL15-CCL14A0A0B4J2E2 113 aa23.34■■□□□ 1.33
C6orf48-206ENST00000375641 CIAO1O76071 339 aa23.34■■□□□ 1.33
C6orf48-206ENST00000375641 CCL15Q16663 113 aa23.34■■□□□ 1.33
C6orf48-206ENST00000375641 CEP126Q9P2H0 1117 aa23.34■■□□□ 1.33
C6orf48-206ENST00000375641 PTPN22Q9Y2R2 807 aa23.34■■□□□ 1.33
C6orf48-206ENST00000375641 OTOFQ9HC10 1997 aa23.34■■□□□ 1.33
C6orf48-206ENST00000375641 SPDYE5A6NIY4 337 aa23.33■■□□□ 1.33
C6orf48-206ENST00000375641 CAP1Q01518 475 aa23.33■■□□□ 1.33
C6orf48-206ENST00000375641 HOOK2Q96ED9 719 aa23.33■■□□□ 1.33
C6orf48-206ENST00000375641 WRNIP1Q96S55 665 aa23.33■■□□□ 1.33
C6orf48-206ENST00000375641 API5Q9BZZ5 524 aaKnown RBP23.33■■□□□ 1.33
C6orf48-206ENST00000375641 EFCC1Q9HA90 598 aa23.33■■□□□ 1.33
C6orf48-206ENST00000375641 SNCAIPQ9Y6H5 919 aa23.33■■□□□ 1.33
C6orf48-206ENST00000375641 HTTP42858 3142 aa23.32■■□□□ 1.32
C6orf48-206ENST00000375641 ATP2B3Q16720 1220 aa23.32■■□□□ 1.32
C6orf48-206ENST00000375641 FAM43AQ8N2R8 423 aa23.32■■□□□ 1.32
C6orf48-206ENST00000375641 ZKSCAN4Q969J2 545 aaPredicted RBP23.32■■□□□ 1.32
C6orf48-206ENST00000375641 ZFYVE28Q9HCC9 887 aa23.32■■□□□ 1.32
C6orf48-206ENST00000375641 TAF1CQ15572 869 aaPredicted RBP23.31■■□□□ 1.32
C6orf48-206ENST00000375641 INTS3Q68E01 1043 aaKnown RBP23.31■■□□□ 1.32
C6orf48-206ENST00000375641 ERO1BQ86YB8 467 aa23.31■■□□□ 1.32
C6orf48-206ENST00000375641 LRRFIP2Q9Y608 721 aaKnown RBP23.31■■□□□ 1.32
C6orf48-206ENST00000375641 IL15P40933 162 aaPredicted RBP23.3■■□□□ 1.32
C6orf48-206ENST00000375641 PRPF38BQ5VTL8 546 aaKnown RBP23.3■■□□□ 1.32
C6orf48-206ENST00000375641 DCAF15Q66K64 600 aa23.3■■□□□ 1.32
C6orf48-206ENST00000375641 FAM151AQ8WW52 585 aa23.3■■□□□ 1.32
C6orf48-206ENST00000375641 GNL3LQ9NVN8 582 aaKnown RBP23.3■■□□□ 1.32
C6orf48-206ENST00000375641 PA2G4Q9UQ80 394 aaKnown RBP23.3■■□□□ 1.32
C6orf48-206ENST00000375641 HDAC5Q9UQL6 1122 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms