RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 CEP83Q9Y592 693 aa14.07□□□□□ -0.16
C9orf3-203ENST00000375315 CCDC172P0C7W6 258 aa14.06□□□□□ -0.16
C9orf3-203ENST00000375315 PTPN12Q05209 780 aaKnown RBP14.06□□□□□ -0.16
C9orf3-203ENST00000375315 CCDC57Q2TAC2 916 aa14.06□□□□□ -0.16
C9orf3-203ENST00000375315 GORABQ5T7V8 394 aa14.06□□□□□ -0.16
C9orf3-203ENST00000375315 PSDA5PKW4 1024 aaPredicted RBP14.06□□□□□ -0.16
C9orf3-203ENST00000375315 BECN2A8MW95 431 aa14.06□□□□□ -0.16
C9orf3-203ENST00000375315 SNAP23O00161 211 aa14.06□□□□□ -0.16
C9orf3-203ENST00000375315 RAB11FIP3O75154 756 aa14.06□□□□□ -0.16
C9orf3-203ENST00000375315 SEC31AO94979 1220 aaKnown RBP14.06□□□□□ -0.16
C9orf3-203ENST00000375315 CCDC83Q8IWF9 413 aa14.06□□□□□ -0.16
C9orf3-203ENST00000375315 PPM1EQ8WY54 764 aa14.06□□□□□ -0.16
C9orf3-203ENST00000375315 H7C1W4 665 aa14.06□□□□□ -0.16
C9orf3-203ENST00000375315 HSP90AB4PQ58FF6 505 aa14.06□□□□□ -0.16
C9orf3-203ENST00000375315 CWC27Q6UX04 472 aaKnown RBP14.06□□□□□ -0.16
C9orf3-203ENST00000375315 REXO1L1PQ8IX06 675 aa14.06□□□□□ -0.16
C9orf3-203ENST00000375315 ADAM21Q9UKJ8 722 aa14.06□□□□□ -0.16
C9orf3-203ENST00000375315 CACNA1FO60840 1977 aa14.05□□□□□ -0.16
C9orf3-203ENST00000375315 IRS4O14654 1257 aaPredicted RBP14.05□□□□□ -0.16
C9orf3-203ENST00000375315 CHGBP05060 677 aa14.05□□□□□ -0.16
C9orf3-203ENST00000375315 FOXO4P98177 505 aa14.05□□□□□ -0.16
C9orf3-203ENST00000375315 PACS2Q86VP3 889 aa14.05□□□□□ -0.16
C9orf3-203ENST00000375315 NLRP10Q86W26 655 aa14.05□□□□□ -0.16
C9orf3-203ENST00000375315 HOMER1Q86YM7 354 aa14.05□□□□□ -0.16
C9orf3-203ENST00000375315 PPP1R13BQ96KQ4 1090 aa14.05□□□□□ -0.16
C9orf3-203ENST00000375315 ZSCAN31Q96LW9 406 aaPredicted RBP14.05□□□□□ -0.16
C9orf3-203ENST00000375315 EFCAB8A8MWE9 144 aa14.05□□□□□ -0.16
C9orf3-203ENST00000375315 TBC1D8O95759 1140 aa14.05□□□□□ -0.16
C9orf3-203ENST00000375315 LARP6Q9BRS8 491 aaKnown RBP14.05□□□□□ -0.16
C9orf3-203ENST00000375315 SH2B1Q9NRF2 756 aaPredicted RBP14.05□□□□□ -0.16
C9orf3-203ENST00000375315 SHANK3Q9BYB0 1731 aa14.04□□□□□ -0.16
C9orf3-203ENST00000375315 PXDNLA1KZ92 1463 aa14.04□□□□□ -0.16
C9orf3-203ENST00000375315 AMIGO3Q86WK7 504 aa14.04□□□□□ -0.16
C9orf3-203ENST00000375315 SPATA32Q96LK8 384 aa14.04□□□□□ -0.16
C9orf3-203ENST00000375315 DBNDD2Q9BQY9 259 aa14.04□□□□□ -0.16
C9orf3-203ENST00000375315 SNRKQ9NRH2 765 aa14.04□□□□□ -0.16
C9orf3-203ENST00000375315 SNX14Q9Y5W7 946 aa14.04□□□□□ -0.16
C9orf3-203ENST00000375315 IQCB1Q15051 598 aa14.04□□□□□ -0.16
C9orf3-203ENST00000375315 SUSD4Q5VX71 490 aa14.04□□□□□ -0.16
C9orf3-203ENST00000375315 BICD2Q8TD16 824 aa14.04□□□□□ -0.16
C9orf3-203ENST00000375315 CCDC34Q96HJ3 373 aa14.04□□□□□ -0.16
C9orf3-203ENST00000375315 ARFGAP3Q9NP61 516 aa14.04□□□□□ -0.16
C9orf3-203ENST00000375315 CCP110O43303 1012 aa14.04□□□□□ -0.16
C9orf3-203ENST00000375315 DHX8Q14562 1220 aaKnown RBP14.04□□□□□ -0.16
C9orf3-203ENST00000375315 CT47A1Q5JQC4 288 aaPredicted RBP14.04□□□□□ -0.16
C9orf3-203ENST00000375315 E4F1Q66K89 784 aaPredicted RBP14.04□□□□□ -0.16
C9orf3-203ENST00000375315 CC2D1AQ6P1N0 951 aaPredicted RBP14.04□□□□□ -0.16
C9orf3-203ENST00000375315 GREM2Q9H772 168 aa14.04□□□□□ -0.16
C9orf3-203ENST00000375315 BCCIPQ9P287 314 aaKnown RBP eCLIP14.04□□□□□ -0.16
C9orf3-203ENST00000375315 UBN2Q6ZU65 1347 aa14.03□□□□□ -0.16
C9orf3-203ENST00000375315 ADAMTS7Q9UKP4 1686 aa14.03□□□□□ -0.16
C9orf3-203ENST00000375315 SASH3O75995 380 aa14.03□□□□□ -0.16
C9orf3-203ENST00000375315 IL6STP40189 918 aaPredicted RBP14.03□□□□□ -0.16
C9orf3-203ENST00000375315 CASP7P55210 303 aa14.03□□□□□ -0.16
C9orf3-203ENST00000375315 LARP1BQ659C4 914 aaKnown RBP14.03□□□□□ -0.16
C9orf3-203ENST00000375315 ISCA1Q9BUE6 129 aa14.03□□□□□ -0.16
C9orf3-203ENST00000375315 IL25Q9H293 177 aa14.03□□□□□ -0.16
C9orf3-203ENST00000375315 IMPACTQ9P2X3 320 aa14.03□□□□□ -0.16
C9orf3-203ENST00000375315 COL22A1Q8NFW1 1626 aaPredicted RBP14.03□□□□□ -0.16
C9orf3-203ENST00000375315 PHLPP2Q6ZVD8 1323 aa14.03□□□□□ -0.16
C9orf3-203ENST00000375315 SALL3Q9BXA9 1300 aa14.03□□□□□ -0.16
C9orf3-203ENST00000375315 TADA3O75528 432 aa14.03□□□□□ -0.16
C9orf3-203ENST00000375315 PDCP20941 246 aa14.03□□□□□ -0.16
C9orf3-203ENST00000375315 KCNJ6P48051 423 aa14.03□□□□□ -0.16
C9orf3-203ENST00000375315 EIF5P55010 431 aaKnown RBP14.03□□□□□ -0.16
C9orf3-203ENST00000375315 USPL1Q5W0Q7 1092 aa14.03□□□□□ -0.16
C9orf3-203ENST00000375315 SUGP1Q8IWZ8 645 aaKnown RBP14.03□□□□□ -0.16
C9orf3-203ENST00000375315 CCDC150Q8NCX0 1101 aa14.03□□□□□ -0.16
C9orf3-203ENST00000375315 SMARCC1Q92922 1105 aaPredicted RBP14.03□□□□□ -0.16
C9orf3-203ENST00000375315 EIF3CLB5ME19 914 aaKnown RBP14.02□□□□□ -0.16
C9orf3-203ENST00000375315 PRR29P0C7W0 189 aa14.02□□□□□ -0.16
C9orf3-203ENST00000375315 ETF1P62495 437 aaKnown RBP14.02□□□□□ -0.16
C9orf3-203ENST00000375315 IFIT5Q13325 482 aaKnown RBP14.02□□□□□ -0.16
C9orf3-203ENST00000375315 MTX1Q13505 466 aa14.02□□□□□ -0.16
C9orf3-203ENST00000375315 STX1AQ16623 288 aa14.02□□□□□ -0.16
C9orf3-203ENST00000375315 EIF3CQ99613 913 aaKnown RBP14.02□□□□□ -0.16
C9orf3-203ENST00000375315 CNNM1Q9NRU3 951 aa14.02□□□□□ -0.16
C9orf3-203ENST00000375315 OSBPL5Q9H0X9 879 aaPredicted RBP14.02□□□□□ -0.17
C9orf3-203ENST00000375315 SEC31BQ9NQW1 1179 aa14.02□□□□□ -0.17
C9orf3-203ENST00000375315 ECHDC1Q9NTX5 307 aa14.02□□□□□ -0.17
C9orf3-203ENST00000375315 ITGB4P16144 1822 aa14.02□□□□□ -0.17
C9orf3-203ENST00000375315 SART3Q15020 963 aaKnown RBP14.01□□□□□ -0.17
C9orf3-203ENST00000375315 LRRFIP1Q32MZ4 808 aaKnown RBP14.01□□□□□ -0.17
C9orf3-203ENST00000375315 LDHAL6AQ6ZMR3 332 aa14.01□□□□□ -0.17
C9orf3-203ENST00000375315 DHX37Q8IY37 1157 aaKnown RBP14.01□□□□□ -0.17
C9orf3-203ENST00000375315 DNAI1Q9UI46 699 aa14.01□□□□□ -0.17
C9orf3-203ENST00000375315 UTYO14607 1347 aa14.01□□□□□ -0.17
C9orf3-203ENST00000375315 DTNBO60941 627 aa14.01□□□□□ -0.17
C9orf3-203ENST00000375315 ITGA6P23229 1130 aa14.01□□□□□ -0.17
C9orf3-203ENST00000375315 RFX5P48382 616 aaPredicted RBP14.01□□□□□ -0.17
C9orf3-203ENST00000375315 EVCP57679 992 aa14.01□□□□□ -0.17
C9orf3-203ENST00000375315 SWT1Q5T5J6 900 aaKnown RBP14.01□□□□□ -0.17
C9orf3-203ENST00000375315 MCTP2Q6DN12 878 aa14.01□□□□□ -0.17
C9orf3-203ENST00000375315 DDX46Q7L014 1031 aaKnown RBP14.01□□□□□ -0.17
C9orf3-203ENST00000375315 FERMT3Q86UX7 667 aa14.01□□□□□ -0.17
C9orf3-203ENST00000375315 GPR161Q8N6U8 529 aaKnown RBP14.01□□□□□ -0.17
C9orf3-203ENST00000375315 PI4K2BQ8TCG2 481 aa14.01□□□□□ -0.17
C9orf3-203ENST00000375315 NR1I2O75469 434 aa14.01□□□□□ -0.17
C9orf3-203ENST00000375315 SMC2O95347 1197 aa14.01□□□□□ -0.17
C9orf3-203ENST00000375315 LARGE1O95461 756 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms