RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 KIF1CO43896 1103 aaKnown RBP11.46□□□□□ -0.57
PTCH1-204ENST00000375290 GNA14O95837 355 aa11.46□□□□□ -0.57
PTCH1-204ENST00000375290 RNASELQ05823 741 aaKnown RBP11.46□□□□□ -0.57
PTCH1-204ENST00000375290 HSP90AA5PQ58FG0 334 aa11.46□□□□□ -0.57
PTCH1-204ENST00000375290 NOX5Q96PH1 765 aa11.46□□□□□ -0.57
PTCH1-204ENST00000375290 TMEM132AQ24JP5 1023 aa11.46□□□□□ -0.58
PTCH1-204ENST00000375290 INTS8Q75QN2 995 aaKnown RBP11.46□□□□□ -0.58
PTCH1-204ENST00000375290 UBL4BQ8N7F7 174 aa11.46□□□□□ -0.58
PTCH1-204ENST00000375290 BRF1Q92994 677 aa11.46□□□□□ -0.58
PTCH1-204ENST00000375290 CUTAO60888 179 aa11.46□□□□□ -0.58
PTCH1-204ENST00000375290 CCDC122Q5T0U0 273 aa11.46□□□□□ -0.58
PTCH1-204ENST00000375290 CABS1Q96KC9 395 aa11.46□□□□□ -0.58
PTCH1-204ENST00000375290 RRAGDQ9NQL2 400 aaPredicted RBP11.46□□□□□ -0.58
PTCH1-204ENST00000375290 P3H4Q92791 437 aa11.46□□□□□ -0.58
PTCH1-204ENST00000375290 NEBLO76041 1014 aa11.46□□□□□ -0.58
PTCH1-204ENST00000375290 ZNF444Q8N0Y2 327 aaPredicted RBP11.46□□□□□ -0.58
PTCH1-204ENST00000375290 CALR3Q96L12 384 aaKnown RBP11.46□□□□□ -0.58
PTCH1-204ENST00000375290 CDC5LQ99459 802 aaKnown RBP11.45□□□□□ -0.58
PTCH1-204ENST00000375290 LMBRD1Q9NUN5 540 aa11.45□□□□□ -0.58
PTCH1-204ENST00000375290 SSBP05455 408 aaKnown RBP eCLIP11.45□□□□□ -0.58
PTCH1-204ENST00000375290 LINS1Q8NG48 757 aa11.45□□□□□ -0.58
PTCH1-204ENST00000375290 KCNG1Q9UIX4 513 aa11.45□□□□□ -0.58
PTCH1-204ENST00000375290 ASXL2Q76L83 1435 aa11.45□□□□□ -0.58
PTCH1-204ENST00000375290 RTN1Q16799 776 aa11.45□□□□□ -0.58
PTCH1-204ENST00000375290 TTC37Q6PGP7 1564 aa11.45□□□□□ -0.58
PTCH1-204ENST00000375290 NOS1P29475 1434 aa11.45□□□□□ -0.58
PTCH1-204ENST00000375290 STX10O60499 249 aa11.45□□□□□ -0.58
PTCH1-204ENST00000375290 KAT14Q9H8E8 782 aa11.45□□□□□ -0.58
PTCH1-204ENST00000375290 KDM5CP41229 1560 aa11.45□□□□□ -0.58
PTCH1-204ENST00000375290 GBP7Q8N8V2 638 aaPredicted RBP11.45□□□□□ -0.58
PTCH1-204ENST00000375290 UBXN1Q04323 297 aa11.45□□□□□ -0.58
PTCH1-204ENST00000375290 UBE4AQ14139 1066 aa11.45□□□□□ -0.58
PTCH1-204ENST00000375290 SMARCC2Q8TAQ2 1214 aa11.45□□□□□ -0.58
PTCH1-204ENST00000375290 GRIPAP1Q4V328 841 aa11.45□□□□□ -0.58
PTCH1-204ENST00000375290 HAUS4Q9H6D7 363 aa11.45□□□□□ -0.58
PTCH1-204ENST00000375290 IDEP14735 1019 aa11.45□□□□□ -0.58
PTCH1-204ENST00000375290 TXNDC2Q86VQ3 553 aa11.45□□□□□ -0.58
PTCH1-204ENST00000375290 CCHCR1Q8TD31 782 aa11.45□□□□□ -0.58
PTCH1-204ENST00000375290 FANCAO15360 1455 aa11.44□□□□□ -0.58
PTCH1-204ENST00000375290 NBPF9Q3BBW0 867 aa11.44□□□□□ -0.58
PTCH1-204ENST00000375290 GDPD2Q9HCC8 539 aa11.44□□□□□ -0.58
PTCH1-204ENST00000375290 IFNKQ9P0W0 207 aa11.44□□□□□ -0.58
PTCH1-204ENST00000375290 GRM8O00222 908 aa11.44□□□□□ -0.58
PTCH1-204ENST00000375290 MYL1P05976 194 aa11.44□□□□□ -0.58
PTCH1-204ENST00000375290 MCTP2Q6DN12 878 aa11.44□□□□□ -0.58
PTCH1-204ENST00000375290 MPHOSPH6Q99547 160 aaKnown RBP11.44□□□□□ -0.58
PTCH1-204ENST00000375290 HOMER3Q9NSC5 361 aa11.44□□□□□ -0.58
PTCH1-204ENST00000375290 SEMA3FQ13275 785 aa11.44□□□□□ -0.58
PTCH1-204ENST00000375290 RPAINQ86UA6 219 aa11.44□□□□□ -0.58
PTCH1-204ENST00000375290 MPNDQ8N594 471 aa11.44□□□□□ -0.58
PTCH1-204ENST00000375290 PER1O15534 1290 aaPredicted RBP11.44□□□□□ -0.58
PTCH1-204ENST00000375290 RBBP5Q15291 538 aaKnown RBP11.44□□□□□ -0.58
PTCH1-204ENST00000375290 CREB3L3Q68CJ9 461 aa11.44□□□□□ -0.58
PTCH1-204ENST00000375290 NAA25Q14CX7 972 aa11.44□□□□□ -0.58
PTCH1-204ENST00000375290 ZNF569Q5MCW4 686 aa11.44□□□□□ -0.58
PTCH1-204ENST00000375290 KSR2Q6VAB6 950 aa11.44□□□□□ -0.58
PTCH1-204ENST00000375290 CRNKL1Q9BZJ0 848 aaKnown RBP11.44□□□□□ -0.58
PTCH1-204ENST00000375290 ARHGEF10O15013 1369 aa11.44□□□□□ -0.58
PTCH1-204ENST00000375290 KRT2P35908 639 aa11.44□□□□□ -0.58
PTCH1-204ENST00000375290 Q9H521 79 aa11.44□□□□□ -0.58
PTCH1-204ENST00000375290 BCL2L12Q9HB09 334 aa11.44□□□□□ -0.58
PTCH1-204ENST00000375290 PLCH2O75038 1416 aa11.44□□□□□ -0.58
PTCH1-204ENST00000375290 DEXIO95424 95 aa11.44□□□□□ -0.58
PTCH1-204ENST00000375290 KRT13P13646 458 aa11.44□□□□□ -0.58
PTCH1-204ENST00000375290 GKAP1Q5VSY0 366 aaPredicted RBP11.44□□□□□ -0.58
PTCH1-204ENST00000375290 PHLDB3Q6NSJ2 640 aa11.44□□□□□ -0.58
PTCH1-204ENST00000375290 RLBP1P12271 317 aa11.43□□□□□ -0.58
PTCH1-204ENST00000375290 SEL1L2Q5TEA6 688 aa11.43□□□□□ -0.58
PTCH1-204ENST00000375290 RBSNQ9H1K0 784 aa11.43□□□□□ -0.58
PTCH1-204ENST00000375290 BICRAQ9NZM4 1560 aa11.43□□□□□ -0.58
PTCH1-204ENST00000375290 KLF18A0A0U1RQI7 1052 aa11.43□□□□□ -0.58
PTCH1-204ENST00000375290 ADALQ6DHV7 355 aa11.43□□□□□ -0.58
PTCH1-204ENST00000375290 SPATS2LQ9NUQ6 558 aaKnown RBP11.43□□□□□ -0.58
PTCH1-204ENST00000375290 ETF1P62495 437 aaKnown RBP11.43□□□□□ -0.58
PTCH1-204ENST00000375290 TFIP11Q9UBB9 837 aaKnown RBP11.43□□□□□ -0.58
PTCH1-204ENST00000375290 RPS6KB1P23443 525 aa11.43□□□□□ -0.58
PTCH1-204ENST00000375290 RNF10Q8N5U6 811 aaKnown RBP11.43□□□□□ -0.58
PTCH1-204ENST00000375290 SECISBP2LQ93073 1101 aaKnown RBP11.43□□□□□ -0.58
PTCH1-204ENST00000375290 SPATA31E1Q6ZUB1 1445 aa11.43□□□□□ -0.58
PTCH1-204ENST00000375290 NLRP12P59046 1061 aa11.43□□□□□ -0.58
PTCH1-204ENST00000375290 SEPT2Q15019 361 aa11.43□□□□□ -0.58
PTCH1-204ENST00000375290 SCLT1Q96NL6 688 aa11.43□□□□□ -0.58
PTCH1-204ENST00000375290 ABCC1P33527 1531 aa11.43□□□□□ -0.58
PTCH1-204ENST00000375290 CEP85LQ5SZL2 805 aa11.43□□□□□ -0.58
PTCH1-204ENST00000375290 RIMS2Q9UQ26 1411 aa11.43□□□□□ -0.58
PTCH1-204ENST00000375290 SLC9C1Q4G0N8 1177 aa11.43□□□□□ -0.58
PTCH1-204ENST00000375290 LMOD1P29536 600 aaPredicted RBP11.43□□□□□ -0.58
PTCH1-204ENST00000375290 LGSNQ5TDP6 509 aa11.43□□□□□ -0.58
PTCH1-204ENST00000375290 Q6ZUG5 572 aa11.43□□□□□ -0.58
PTCH1-204ENST00000375290 DZIP1Q86YF9 867 aaKnown RBP11.43□□□□□ -0.58
PTCH1-204ENST00000375290 CPLX3Q8WVH0 158 aa11.43□□□□□ -0.58
PTCH1-204ENST00000375290 BIN1O00499 593 aa11.43□□□□□ -0.58
PTCH1-204ENST00000375290 NEDD9Q14511 834 aa11.43□□□□□ -0.58
PTCH1-204ENST00000375290 ZBTB7BO15156 539 aaPredicted RBP11.42□□□□□ -0.58
PTCH1-204ENST00000375290 FLOT1O75955 427 aa11.42□□□□□ -0.58
PTCH1-204ENST00000375290 SNRPA1P09661 255 aaKnown RBP11.42□□□□□ -0.58
PTCH1-204ENST00000375290 TCP1P17987 556 aaKnown RBP11.42□□□□□ -0.58
PTCH1-204ENST00000375290 CLEC17AQ6ZS10 378 aa11.42□□□□□ -0.58
PTCH1-204ENST00000375290 KIFAP3Q92845 792 aa11.42□□□□□ -0.58
PTCH1-204ENST00000375290 LZTS2Q9BRK4 669 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms