RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 MRPS27Q92552 414 aaKnown RBP13.97□□□□□ -0.17
NPLOC4-202ENST00000374747 RAD50Q92878 1312 aa13.97□□□□□ -0.17
NPLOC4-202ENST00000374747 GIGYF1O75420 1035 aaPredicted RBP13.96□□□□□ -0.17
NPLOC4-202ENST00000374747 A1BGP04217 495 aa13.96□□□□□ -0.17
NPLOC4-202ENST00000374747 SH3TC1Q8TE82 1336 aa13.96□□□□□ -0.17
NPLOC4-202ENST00000374747 CYP7A1P22680 504 aa13.96□□□□□ -0.17
NPLOC4-202ENST00000374747 GOLGA1Q92805 767 aa13.96□□□□□ -0.17
NPLOC4-202ENST00000374747 EYA2O00167 538 aa13.96□□□□□ -0.17
NPLOC4-202ENST00000374747 NMIQ13287 307 aaPredicted RBP13.96□□□□□ -0.17
NPLOC4-202ENST00000374747 SLC9C2Q5TAH2 1124 aa13.96□□□□□ -0.17
NPLOC4-202ENST00000374747 STXBP4Q6ZWJ1 553 aa13.96□□□□□ -0.17
NPLOC4-202ENST00000374747 ANKRD2Q9GZV1 360 aa13.96□□□□□ -0.17
NPLOC4-202ENST00000374747 TTC12Q9H892 705 aaPredicted RBP13.96□□□□□ -0.17
NPLOC4-202ENST00000374747 ABCC4O15439 1325 aa13.96□□□□□ -0.17
NPLOC4-202ENST00000374747 TRAPPC3LQ5T215 181 aa13.96□□□□□ -0.18
NPLOC4-202ENST00000374747 SLC26A6Q9BXS9 759 aa13.96□□□□□ -0.18
NPLOC4-202ENST00000374747 GNPATO15228 680 aa13.95□□□□□ -0.18
NPLOC4-202ENST00000374747 CAPN2P17655 700 aa13.95□□□□□ -0.18
NPLOC4-202ENST00000374747 CCDC144CPQ8IYA2 1237 aa13.95□□□□□ -0.18
NPLOC4-202ENST00000374747 KRT23Q9C075 422 aa13.95□□□□□ -0.18
NPLOC4-202ENST00000374747 DACT1Q9NYF0 836 aa13.95□□□□□ -0.18
NPLOC4-202ENST00000374747 ZNF219Q9P2Y4 722 aaPredicted RBP13.95□□□□□ -0.18
NPLOC4-202ENST00000374747 AOX1Q06278 1338 aa13.95□□□□□ -0.18
NPLOC4-202ENST00000374747 RNF113AO15541 343 aaKnown RBP13.95□□□□□ -0.18
NPLOC4-202ENST00000374747 TUBB4BP68371 445 aa13.95□□□□□ -0.18
NPLOC4-202ENST00000374747 CCDC97Q96F63 343 aaPredicted RBP13.95□□□□□ -0.18
NPLOC4-202ENST00000374747 CCDC87Q9NVE4 849 aa13.95□□□□□ -0.18
NPLOC4-202ENST00000374747 CCNL1Q9UK58 526 aaPredicted RBP13.95□□□□□ -0.18
NPLOC4-202ENST00000374747 GCKRQ14397 625 aa13.95□□□□□ -0.18
NPLOC4-202ENST00000374747 DNAJC10Q8IXB1 793 aa13.95□□□□□ -0.18
NPLOC4-202ENST00000374747 AOPEPQ8N6M6 819 aa13.95□□□□□ -0.18
NPLOC4-202ENST00000374747 BRF1Q92994 677 aa13.95□□□□□ -0.18
NPLOC4-202ENST00000374747 CNNM2Q9H8M5 875 aa13.95□□□□□ -0.18
NPLOC4-202ENST00000374747 BMP15O95972 392 aa13.95□□□□□ -0.18
NPLOC4-202ENST00000374747 SYT1P21579 422 aa13.95□□□□□ -0.18
NPLOC4-202ENST00000374747 RBM25P49756 843 aaKnown RBP13.95□□□□□ -0.18
NPLOC4-202ENST00000374747 NECAB1Q8N987 351 aa13.95□□□□□ -0.18
NPLOC4-202ENST00000374747 ATRIPQ8WXE1 791 aa13.95□□□□□ -0.18
NPLOC4-202ENST00000374747 FAM89AQ96GI7 184 aa13.95□□□□□ -0.18
NPLOC4-202ENST00000374747 DNAJC25Q9H1X3 360 aa13.95□□□□□ -0.18
NPLOC4-202ENST00000374747 EXOC1Q9NV70 894 aa13.95□□□□□ -0.18
NPLOC4-202ENST00000374747 DIP2CQ9Y2E4 1556 aa13.95□□□□□ -0.18
NPLOC4-202ENST00000374747 IFT172Q9UG01 1749 aa13.95□□□□□ -0.18
NPLOC4-202ENST00000374747 CCDC172P0C7W6 258 aa13.95□□□□□ -0.18
NPLOC4-202ENST00000374747 RRAGBQ5VZM2 374 aa13.95□□□□□ -0.18
NPLOC4-202ENST00000374747 ZNF804AQ7Z570 1209 aa13.95□□□□□ -0.18
NPLOC4-202ENST00000374747 PLVAPQ9BX97 442 aa13.95□□□□□ -0.18
NPLOC4-202ENST00000374747 EHMT1Q9H9B1 1298 aa13.95□□□□□ -0.18
NPLOC4-202ENST00000374747 ERBB4Q15303 1308 aa13.94□□□□□ -0.18
NPLOC4-202ENST00000374747 PRC1O43663 620 aa13.94□□□□□ -0.18
NPLOC4-202ENST00000374747 F13A1P00488 732 aa13.94□□□□□ -0.18
NPLOC4-202ENST00000374747 FAM98CQ17RN3 349 aaKnown RBP13.94□□□□□ -0.18
NPLOC4-202ENST00000374747 RRAGDQ9NQL2 400 aaPredicted RBP13.94□□□□□ -0.18
NPLOC4-202ENST00000374747 TFCP2L1Q9NZI6 479 aa13.94□□□□□ -0.18
NPLOC4-202ENST00000374747 SETBP1Q9Y6X0 1596 aa13.94□□□□□ -0.18
NPLOC4-202ENST00000374747 CTAGE9A4FU28 777 aa13.94□□□□□ -0.18
NPLOC4-202ENST00000374747 CHMLP26374 656 aa13.94□□□□□ -0.18
NPLOC4-202ENST00000374747 NAA16Q6N069 864 aaPredicted RBP13.94□□□□□ -0.18
NPLOC4-202ENST00000374747 IKBKGQ9Y6K9 419 aa13.94□□□□□ -0.18
NPLOC4-202ENST00000374747 TSPY2A6NKD2 308 aa13.94□□□□□ -0.18
NPLOC4-202ENST00000374747 CD163L1Q9NR16 1453 aa13.94□□□□□ -0.18
NPLOC4-202ENST00000374747 CAMSAP1Q5T5Y3 1602 aa13.94□□□□□ -0.18
NPLOC4-202ENST00000374747 A0A1W2PRG0 241 aa13.94□□□□□ -0.18
NPLOC4-202ENST00000374747 PDE8AO60658 829 aa13.94□□□□□ -0.18
NPLOC4-202ENST00000374747 CCDC6Q16204 474 aa13.94□□□□□ -0.18
NPLOC4-202ENST00000374747 MSL1Q68DK7 614 aa13.94□□□□□ -0.18
NPLOC4-202ENST00000374747 CARD10Q9BWT7 1032 aa13.94□□□□□ -0.18
NPLOC4-202ENST00000374747 HLA-DOAP06340 250 aa13.93□□□□□ -0.18
NPLOC4-202ENST00000374747 GNAT2P19087 354 aa13.93□□□□□ -0.18
NPLOC4-202ENST00000374747 TMTC2Q8N394 836 aa13.93□□□□□ -0.18
NPLOC4-202ENST00000374747 SLC4A4Q9Y6R1 1079 aa13.93□□□□□ -0.18
NPLOC4-202ENST00000374747 TACC1O75410 805 aa13.93□□□□□ -0.18
NPLOC4-202ENST00000374747 SELENOOQ9BVL4 669 aa13.93□□□□□ -0.18
NPLOC4-202ENST00000374747 RIMBP3CA6NJZ7 1639 aa13.93□□□□□ -0.18
NPLOC4-202ENST00000374747 RIMBP3BA6NNM3 1639 aa13.93□□□□□ -0.18
NPLOC4-202ENST00000374747 RIMBP3Q9UFD9 1639 aa13.93□□□□□ -0.18
NPLOC4-202ENST00000374747 MICALL1Q8N3F8 863 aa13.93□□□□□ -0.18
NPLOC4-202ENST00000374747 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.93□□□□□ -0.18
NPLOC4-202ENST00000374747 USP21Q9UK80 565 aa13.93□□□□□ -0.18
NPLOC4-202ENST00000374747 V9GYY5 206 aaPredicted RBP13.93□□□□□ -0.18
NPLOC4-202ENST00000374747 KLF18A0A0U1RQI7 1052 aa13.92□□□□□ -0.18
NPLOC4-202ENST00000374747 EBAG9O00559 213 aa13.92□□□□□ -0.18
NPLOC4-202ENST00000374747 NBPF7P0C2Y1 421 aaPredicted RBP13.92□□□□□ -0.18
NPLOC4-202ENST00000374747 SUCLG2Q96I99 432 aa13.92□□□□□ -0.18
NPLOC4-202ENST00000374747 SPAG5Q96R06 1193 aa13.92□□□□□ -0.18
NPLOC4-202ENST00000374747 PPLO60437 1756 aa13.92□□□□□ -0.18
NPLOC4-202ENST00000374747 PPFIA3O75145 1194 aa13.92□□□□□ -0.18
NPLOC4-202ENST00000374747 TYRO3Q06418 890 aa13.92□□□□□ -0.18
NPLOC4-202ENST00000374747 RAB3GAP1Q15042 981 aa13.92□□□□□ -0.18
NPLOC4-202ENST00000374747 ANKS4BQ8N8V4 417 aa13.92□□□□□ -0.18
NPLOC4-202ENST00000374747 IQSEC3Q9UPP2 1182 aaPredicted RBP13.92□□□□□ -0.18
NPLOC4-202ENST00000374747 MYO3AQ8NEV4 1616 aa13.92□□□□□ -0.18
NPLOC4-202ENST00000374747 SIGLEC1Q9BZZ2 1709 aa13.92□□□□□ -0.18
NPLOC4-202ENST00000374747 ACTN2P35609 894 aa13.92□□□□□ -0.18
NPLOC4-202ENST00000374747 RAB11FIP4Q86YS3 637 aa13.92□□□□□ -0.18
NPLOC4-202ENST00000374747 PPP1R14CQ8TAE6 165 aa13.92□□□□□ -0.18
NPLOC4-202ENST00000374747 ESR2Q92731 530 aa13.92□□□□□ -0.18
NPLOC4-202ENST00000374747 STMN4Q9H169 189 aaPredicted RBP13.92□□□□□ -0.18
NPLOC4-202ENST00000374747 RASAL2Q9UJF2 1139 aa13.92□□□□□ -0.18
NPLOC4-202ENST00000374747 KIF4AO95239 1232 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms