RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 EIF5P55010 431 aaKnown RBP16.31■□□□□ 0.2
HMGCL-203ENST00000374490 C1QTNF8P60827 252 aa16.31■□□□□ 0.2
HMGCL-203ENST00000374490 NOLC1Q14978 699 aaKnown RBP eCLIP16.31■□□□□ 0.2
HMGCL-203ENST00000374490 ATP2B3Q16720 1220 aa16.31■□□□□ 0.2
HMGCL-203ENST00000374490 INTS5Q6P9B9 1019 aaKnown RBP16.31■□□□□ 0.2
HMGCL-203ENST00000374490 CCDC73Q6ZRK6 1079 aa16.31■□□□□ 0.2
HMGCL-203ENST00000374490 COL23A1Q86Y22 540 aaPredicted RBP16.31■□□□□ 0.2
HMGCL-203ENST00000374490 NLGN2Q8NFZ4 835 aa16.31■□□□□ 0.2
HMGCL-203ENST00000374490 PRIMPOLQ96LW4 560 aa16.31■□□□□ 0.2
HMGCL-203ENST00000374490 MAP7D2Q96T17 732 aa16.31■□□□□ 0.2
HMGCL-203ENST00000374490 ANKRD18BA2A2Z9 1011 aa16.3■□□□□ 0.2
HMGCL-203ENST00000374490 ADD1P35611 737 aaKnown RBP16.3■□□□□ 0.2
HMGCL-203ENST00000374490 PLCB2Q00722 1185 aa16.3■□□□□ 0.2
HMGCL-203ENST00000374490 CAMK4Q16566 473 aa16.3■□□□□ 0.2
HMGCL-203ENST00000374490 ANO6Q4KMQ2 910 aa16.3■□□□□ 0.2
HMGCL-203ENST00000374490 FLAD1Q8NFF5 587 aa16.3■□□□□ 0.2
HMGCL-203ENST00000374490 NCOA7Q8NI08 942 aa16.3■□□□□ 0.2
HMGCL-203ENST00000374490 CBX8Q9HC52 389 aa16.3■□□□□ 0.2
HMGCL-203ENST00000374490 TBC1D2BQ9UPU7 963 aa16.3■□□□□ 0.2
HMGCL-203ENST00000374490 UTRNP46939 3433 aa16.3■□□□□ 0.2
HMGCL-203ENST00000374490 MYH14Q7Z406 1995 aaKnown RBP16.3■□□□□ 0.2
HMGCL-203ENST00000374490 CARMIL3Q8ND23 1372 aa16.3■□□□□ 0.2
HMGCL-203ENST00000374490 UQCRHLA0A096LP55 91 aa16.3■□□□□ 0.2
HMGCL-203ENST00000374490 GRIN3BO60391 1043 aa16.3■□□□□ 0.2
HMGCL-203ENST00000374490 NR1I2O75469 434 aa16.3■□□□□ 0.2
HMGCL-203ENST00000374490 UQCRHP07919 91 aa16.3■□□□□ 0.2
HMGCL-203ENST00000374490 ADORA1P30542 326 aa16.3■□□□□ 0.2
HMGCL-203ENST00000374490 HLFQ16534 295 aa16.3■□□□□ 0.2
HMGCL-203ENST00000374490 METTL24Q5JXM2 366 aa16.3■□□□□ 0.2
HMGCL-203ENST00000374490 CKAP2LQ8IYA6 745 aa16.3■□□□□ 0.2
HMGCL-203ENST00000374490 GPTP24298 496 aa16.29■□□□□ 0.2
HMGCL-203ENST00000374490 CTSWP56202 376 aa16.29■□□□□ 0.2
HMGCL-203ENST00000374490 CCT2P78371 535 aaKnown RBP16.29■□□□□ 0.2
HMGCL-203ENST00000374490 MSL1Q68DK7 614 aa16.29■□□□□ 0.2
HMGCL-203ENST00000374490 MTERF4Q7Z6M4 381 aaKnown RBP16.29■□□□□ 0.2
HMGCL-203ENST00000374490 RALYLQ86SE5 291 aaKnown RBP16.29■□□□□ 0.2
HMGCL-203ENST00000374490 NLRP10Q86W26 655 aa16.29■□□□□ 0.2
HMGCL-203ENST00000374490 MB21D2Q8IYB1 491 aaPredicted RBP16.29■□□□□ 0.2
HMGCL-203ENST00000374490 FAM89AQ96GI7 184 aa16.29■□□□□ 0.2
HMGCL-203ENST00000374490 TTC12Q9H892 705 aaPredicted RBP16.29■□□□□ 0.2
HMGCL-203ENST00000374490 NAP1L2Q9ULW6 460 aaPredicted RBP16.29■□□□□ 0.2
HMGCL-203ENST00000374490 RIPOR2Q9Y4F9 1068 aa16.29■□□□□ 0.2
HMGCL-203ENST00000374490 MYH15Q9Y2K3 1946 aa16.28■□□□□ 0.2
HMGCL-203ENST00000374490 PRC1O43663 620 aa16.28■□□□□ 0.2
HMGCL-203ENST00000374490 UQCRFS1P1P0C7P4 283 aa16.28■□□□□ 0.2
HMGCL-203ENST00000374490 CDC25BP30305 580 aa16.28■□□□□ 0.2
HMGCL-203ENST00000374490 ZAP70P43403 619 aa16.28■□□□□ 0.2
HMGCL-203ENST00000374490 STX1AQ16623 288 aa16.28■□□□□ 0.2
HMGCL-203ENST00000374490 SLFNL1Q499Z3 407 aa16.28■□□□□ 0.2
HMGCL-203ENST00000374490 DNTTIP2Q5QJE6 756 aaKnown RBP16.28■□□□□ 0.2
HMGCL-203ENST00000374490 CCAR1Q8IX12 1150 aaKnown RBP16.28■□□□□ 0.2
HMGCL-203ENST00000374490 AK7Q96M32 723 aa16.28■□□□□ 0.2
HMGCL-203ENST00000374490 ZNF213O14771 459 aa16.27■□□□□ 0.2
HMGCL-203ENST00000374490 AP5Z1O43299 807 aa16.27■□□□□ 0.2
HMGCL-203ENST00000374490 ZNF165P49910 485 aa16.27■□□□□ 0.2
HMGCL-203ENST00000374490 QSER1Q2KHR3 1735 aa16.27■□□□□ 0.2
HMGCL-203ENST00000374490 TTLL5Q6EMB2 1281 aa16.27■□□□□ 0.2
HMGCL-203ENST00000374490 LDHAL6AQ6ZMR3 332 aa16.27■□□□□ 0.2
HMGCL-203ENST00000374490 BRAPQ7Z569 592 aa16.27■□□□□ 0.2
HMGCL-203ENST00000374490 TTLL11Q8NHH1 800 aa16.27■□□□□ 0.2
HMGCL-203ENST00000374490 RTEL1Q9NZ71 1219 aa16.27■□□□□ 0.2
HMGCL-203ENST00000374490 CNTNAP4Q9C0A0 1308 aa16.27■□□□□ 0.2
HMGCL-203ENST00000374490 LY75O60449 1722 aa16.27■□□□□ 0.19
HMGCL-203ENST00000374490 BCORQ6W2J9 1755 aa16.27■□□□□ 0.19
HMGCL-203ENST00000374490 A0A1W2PQ27 194 aa16.27■□□□□ 0.19
HMGCL-203ENST00000374490 A0A1W2PQ64 194 aa16.27■□□□□ 0.19
HMGCL-203ENST00000374490 A0A1W2PQD8 194 aa16.27■□□□□ 0.19
HMGCL-203ENST00000374490 GPAA1O43292 621 aa16.27■□□□□ 0.19
HMGCL-203ENST00000374490 PDE8AO60658 829 aa16.27■□□□□ 0.19
HMGCL-203ENST00000374490 KINO60870 393 aaKnown RBP16.27■□□□□ 0.19
HMGCL-203ENST00000374490 FGAP02671 866 aa16.27■□□□□ 0.19
HMGCL-203ENST00000374490 ITGA6P23229 1130 aa16.27■□□□□ 0.19
HMGCL-203ENST00000374490 FAM160A1Q05DH4 1040 aa16.27■□□□□ 0.19
HMGCL-203ENST00000374490 UBE3CQ15386 1083 aa16.27■□□□□ 0.19
HMGCL-203ENST00000374490 LUZP1Q86V48 1076 aa16.27■□□□□ 0.19
HMGCL-203ENST00000374490 LINC00116Q8NCU8 138 aa16.27■□□□□ 0.19
HMGCL-203ENST00000374490 KIAA1524Q8TCG1 905 aa16.27■□□□□ 0.19
HMGCL-203ENST00000374490 PDCL3Q9H2J4 239 aa16.27■□□□□ 0.19
HMGCL-203ENST00000374490 CNNM1Q9NRU3 951 aa16.27■□□□□ 0.19
HMGCL-203ENST00000374490 MYH3P11055 1940 aa16.26■□□□□ 0.19
HMGCL-203ENST00000374490 FOXP2O15409 715 aa16.26■□□□□ 0.19
HMGCL-203ENST00000374490 YEATS4O95619 227 aa16.26■□□□□ 0.19
HMGCL-203ENST00000374490 ADD2P35612 726 aa16.26■□□□□ 0.19
HMGCL-203ENST00000374490 ZNF75DP51815 510 aa16.26■□□□□ 0.19
HMGCL-203ENST00000374490 TRDNQ13061 729 aa16.26■□□□□ 0.19
HMGCL-203ENST00000374490 GLIPR1L2Q4G1C9 344 aa16.26■□□□□ 0.19
HMGCL-203ENST00000374490 SARM1Q6SZW1 724 aa16.26■□□□□ 0.19
HMGCL-203ENST00000374490 PLA2G4DQ86XP0 818 aa16.26■□□□□ 0.19
HMGCL-203ENST00000374490 USP28Q96RU2 1077 aa16.26■□□□□ 0.19
HMGCL-203ENST00000374490 NCOA5Q9HCD5 579 aaKnown RBP16.26■□□□□ 0.19
HMGCL-203ENST00000374490 ZNF652Q9Y2D9 606 aa16.26■□□□□ 0.19
HMGCL-203ENST00000374490 CD2APQ9Y5K6 639 aa16.26■□□□□ 0.19
HMGCL-203ENST00000374490 KLF18A0A0U1RQI7 1052 aa16.25■□□□□ 0.19
HMGCL-203ENST00000374490 GOLGA8BA8MQT2 603 aa16.25■□□□□ 0.19
HMGCL-203ENST00000374490 IRS4O14654 1257 aaPredicted RBP16.25■□□□□ 0.19
HMGCL-203ENST00000374490 CPLX1O14810 134 aa16.25■□□□□ 0.19
HMGCL-203ENST00000374490 YBX3P16989 372 aaKnown RBP eCLIP16.25■□□□□ 0.19
HMGCL-203ENST00000374490 SCARF1Q14162 830 aa16.25■□□□□ 0.19
HMGCL-203ENST00000374490 MYRIPQ8NFW9 859 aa16.25■□□□□ 0.19
HMGCL-203ENST00000374490 KCNG4Q8TDN1 519 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 314 ms