RNA–Protein interactions for RNA: ENST00000374339.4

PTPN20-202, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN20, Length 1,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-202ENST00000374339 KCNA3P22001 575 aa11.62□□□□□ -0.55
PTPN20-202ENST00000374339 CHAF1AQ13111 956 aaPredicted RBP11.62□□□□□ -0.55
PTPN20-202ENST00000374339 ERICH6Q7L0X2 663 aa11.62□□□□□ -0.55
PTPN20-202ENST00000374339 ZNF589Q86UQ0 364 aaPredicted RBP11.62□□□□□ -0.55
PTPN20-202ENST00000374339 SLC51AQ86UW1 340 aa11.62□□□□□ -0.55
PTPN20-202ENST00000374339 MAGEB6Q8N7X4 407 aa11.62□□□□□ -0.55
PTPN20-202ENST00000374339 OSBP2Q969R2 916 aa11.62□□□□□ -0.55
PTPN20-202ENST00000374339 SEC62Q99442 399 aaKnown RBP11.62□□□□□ -0.55
PTPN20-202ENST00000374339 DSCC1Q9BVC3 393 aa11.62□□□□□ -0.55
PTPN20-202ENST00000374339 TCRBV5S4A2TA0A5A2 114 aa11.61□□□□□ -0.55
PTPN20-202ENST00000374339 C21orf2O43822 256 aa11.61□□□□□ -0.55
PTPN20-202ENST00000374339 PTH1RQ03431 593 aa11.61□□□□□ -0.55
PTPN20-202ENST00000374339 BECN1Q14457 450 aa11.61□□□□□ -0.55
PTPN20-202ENST00000374339 RABEP1Q15276 862 aa11.61□□□□□ -0.55
PTPN20-202ENST00000374339 DALRD3Q5D0E6 543 aaKnown RBP11.61□□□□□ -0.55
PTPN20-202ENST00000374339 OLFM4Q6UX06 510 aa11.61□□□□□ -0.55
PTPN20-202ENST00000374339 AIDAQ96BJ3 306 aa11.61□□□□□ -0.55
PTPN20-202ENST00000374339 IL17RAQ96F46 866 aa11.61□□□□□ -0.55
PTPN20-202ENST00000374339 GPR101Q96P66 508 aaPredicted RBP11.61□□□□□ -0.55
PTPN20-202ENST00000374339 IPO9Q96P70 1041 aaKnown RBP11.61□□□□□ -0.55
PTPN20-202ENST00000374339 PSMD1Q99460 953 aa11.61□□□□□ -0.55
PTPN20-202ENST00000374339 VPS33BQ9H267 617 aa11.61□□□□□ -0.55
PTPN20-202ENST00000374339 PPP1R1BQ9UD71 204 aaPredicted RBP11.61□□□□□ -0.55
PTPN20-202ENST00000374339 DAXXQ9UER7 740 aaPredicted RBP11.61□□□□□ -0.55
PTPN20-202ENST00000374339 WWC3Q9ULE0 1092 aa11.61□□□□□ -0.55
PTPN20-202ENST00000374339 RBM8AQ9Y5S9 174 aaKnown RBP11.61□□□□□ -0.55
PTPN20-202ENST00000374339 SNED1Q8TER0 1413 aa11.61□□□□□ -0.55
PTPN20-202ENST00000374339 M0R2C6 588 aa11.6□□□□□ -0.55
PTPN20-202ENST00000374339 RIMBP2O15034 1052 aa11.6□□□□□ -0.55
PTPN20-202ENST00000374339 GPAA1O43292 621 aa11.6□□□□□ -0.55
PTPN20-202ENST00000374339 LDHBP07195 334 aaKnown RBP11.6□□□□□ -0.55
PTPN20-202ENST00000374339 GNAT2P19087 354 aa11.6□□□□□ -0.55
PTPN20-202ENST00000374339 GSTO1P78417 241 aa11.6□□□□□ -0.55
PTPN20-202ENST00000374339 NECTIN1Q15223 517 aa11.6□□□□□ -0.55
PTPN20-202ENST00000374339 NAA16Q6N069 864 aaPredicted RBP11.6□□□□□ -0.55
PTPN20-202ENST00000374339 CCDC129Q6ZRS4 1044 aa11.6□□□□□ -0.55
PTPN20-202ENST00000374339 PODNQ7Z5L7 613 aa11.6□□□□□ -0.55
PTPN20-202ENST00000374339 DZIP1Q86YF9 867 aaKnown RBP11.6□□□□□ -0.55
PTPN20-202ENST00000374339 KIF2CQ99661 725 aa11.6□□□□□ -0.55
PTPN20-202ENST00000374339 PUS7LQ9H0K6 701 aaKnown RBP11.6□□□□□ -0.55
PTPN20-202ENST00000374339 CTNNA3Q9UI47 895 aa11.6□□□□□ -0.55
PTPN20-202ENST00000374339 SUGT1Q9Y2Z0 365 aa11.6□□□□□ -0.55
PTPN20-202ENST00000374339 FAM205AQ6ZU69 1335 aa11.6□□□□□ -0.55
PTPN20-202ENST00000374339 CHGBP05060 677 aa11.59□□□□□ -0.55
PTPN20-202ENST00000374339 HSPD1P10809 573 aaKnown RBP11.59□□□□□ -0.55
PTPN20-202ENST00000374339 CYP7A1P22680 504 aa11.59□□□□□ -0.55
PTPN20-202ENST00000374339 MECOMQ03112 1051 aa11.59□□□□□ -0.55
PTPN20-202ENST00000374339 KIAA2012Q0VF49 1180 aa11.59□□□□□ -0.55
PTPN20-202ENST00000374339 ILDR2Q71H61 639 aa11.59□□□□□ -0.55
PTPN20-202ENST00000374339 CERS3Q8IU89 383 aa11.59□□□□□ -0.55
PTPN20-202ENST00000374339 SLF2Q8IX21 1173 aa11.59□□□□□ -0.55
PTPN20-202ENST00000374339 RPAP1Q9BWH6 1393 aaPredicted RBP11.59□□□□□ -0.55
PTPN20-202ENST00000374339 ST18O60284 1047 aa11.58□□□□□ -0.56
PTPN20-202ENST00000374339 LDHCP07864 332 aa11.58□□□□□ -0.56
PTPN20-202ENST00000374339 KRT32Q14532 448 aa11.58□□□□□ -0.56
PTPN20-202ENST00000374339 SLFNL1Q499Z3 407 aa11.58□□□□□ -0.56
PTPN20-202ENST00000374339 KLHL34Q8N239 644 aa11.58□□□□□ -0.56
PTPN20-202ENST00000374339 KCNB2Q92953 911 aa11.58□□□□□ -0.56
PTPN20-202ENST00000374339 NSUN4Q96CB9 384 aaKnown RBP11.58□□□□□ -0.56
PTPN20-202ENST00000374339 ARFGEF1Q9Y6D6 1849 aa11.58□□□□□ -0.56
PTPN20-202ENST00000374339 ZMYM6O95789 1325 aa11.57□□□□□ -0.56
PTPN20-202ENST00000374339 MAGEB6P1A0A0J9YX57 407 aa11.57□□□□□ -0.56
PTPN20-202ENST00000374339 SLC27A2O14975 620 aa11.57□□□□□ -0.56
PTPN20-202ENST00000374339 MBD4O95243 580 aa11.57□□□□□ -0.56
PTPN20-202ENST00000374339 PSMA5P28066 241 aa11.57□□□□□ -0.56
PTPN20-202ENST00000374339 PRDX5P30044 214 aa11.57□□□□□ -0.56
PTPN20-202ENST00000374339 DOK7Q18PE1 504 aa11.57□□□□□ -0.56
PTPN20-202ENST00000374339 TSGA10IPQ3SY00 556 aa11.57□□□□□ -0.56
PTPN20-202ENST00000374339 MFSD14BQ5SR56 506 aa11.57□□□□□ -0.56
PTPN20-202ENST00000374339 CREB3L3Q68CJ9 461 aa11.57□□□□□ -0.56
PTPN20-202ENST00000374339 SNX21Q969T3 373 aa11.57□□□□□ -0.56
PTPN20-202ENST00000374339 STRBPQ96SI9 672 aaKnown RBP11.57□□□□□ -0.56
PTPN20-202ENST00000374339 NOL10Q9BSC4 688 aaKnown RBP11.57□□□□□ -0.56
PTPN20-202ENST00000374339 NACAP1Q9BZK3 213 aa11.57□□□□□ -0.56
PTPN20-202ENST00000374339 SNX14Q9Y5W7 946 aa11.57□□□□□ -0.56
PTPN20-202ENST00000374339 CHD4Q14839 1912 aa11.57□□□□□ -0.56
PTPN20-202ENST00000374339 FER1L6Q2WGJ9 1857 aa11.57□□□□□ -0.56
PTPN20-202ENST00000374339 PSME4Q14997 1843 aa11.56□□□□□ -0.56
PTPN20-202ENST00000374339 LAMA4Q16363 1823 aa11.56□□□□□ -0.56
PTPN20-202ENST00000374339 PPIP5K2O43314 1243 aa11.56□□□□□ -0.56
PTPN20-202ENST00000374339 ECE2O60344 883 aa11.56□□□□□ -0.56
PTPN20-202ENST00000374339 FKBP1AP62942 108 aaKnown RBP11.56□□□□□ -0.56
PTPN20-202ENST00000374339 GTF2IP78347 998 aa11.56□□□□□ -0.56
PTPN20-202ENST00000374339 ALX1Q15699 326 aa11.56□□□□□ -0.56
PTPN20-202ENST00000374339 AOC3Q16853 763 aa11.56□□□□□ -0.56
PTPN20-202ENST00000374339 IMMTQ16891 758 aaKnown RBP11.56□□□□□ -0.56
PTPN20-202ENST00000374339 TTLL5Q6EMB2 1281 aa11.56□□□□□ -0.56
PTPN20-202ENST00000374339 HSCBQ8IWL3 235 aa11.56□□□□□ -0.56
PTPN20-202ENST00000374339 TM6SF1Q9BZW5 370 aa11.56□□□□□ -0.56
PTPN20-202ENST00000374339 PALD1Q9ULE6 856 aa11.56□□□□□ -0.56
PTPN20-202ENST00000374339 MYH2Q9UKX2 1941 aa11.56□□□□□ -0.56
PTPN20-202ENST00000374339 PATL2C9JE40 543 aaKnown RBP11.55□□□□□ -0.56
PTPN20-202ENST00000374339 BAG3O95817 575 aa11.55□□□□□ -0.56
PTPN20-202ENST00000374339 APPP05067 770 aa11.55□□□□□ -0.56
PTPN20-202ENST00000374339 VPS53Q5VIR6 699 aa11.55□□□□□ -0.56
PTPN20-202ENST00000374339 STRIP1Q5VSL9 837 aa11.55□□□□□ -0.56
PTPN20-202ENST00000374339 CHADLQ6NUI6 762 aa11.55□□□□□ -0.56
PTPN20-202ENST00000374339 FBXW7Q969H0 707 aa11.55□□□□□ -0.56
PTPN20-202ENST00000374339 DBNDD1Q9H9R9 158 aa11.55□□□□□ -0.56
PTPN20-202ENST00000374339 JAG2Q9Y219 1238 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms