RNA–Protein interactions for RNA: ENST00000374180.3

HDHD3-202, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-202ENST00000374180 PRDX5P30044 214 aa19.55■□□□□ 0.72
HDHD3-202ENST00000374180 HDLBPQ00341 1268 aaKnown RBP19.55■□□□□ 0.72
HDHD3-202ENST00000374180 SPTY2D1Q68D10 685 aaPredicted RBP19.55■□□□□ 0.72
HDHD3-202ENST00000374180 ZBED3Q96IU2 234 aaPredicted RBP19.55■□□□□ 0.72
HDHD3-202ENST00000374180 MRIQ9BWK5 157 aa19.55■□□□□ 0.72
HDHD3-202ENST00000374180 GLIS2Q9BZE0 524 aaPredicted RBP19.55■□□□□ 0.72
HDHD3-202ENST00000374180 SNRKQ9NRH2 765 aa19.55■□□□□ 0.72
HDHD3-202ENST00000374180 SPDYE2BA6NHP3 402 aa19.54■□□□□ 0.72
HDHD3-202ENST00000374180 SPDYE6P0CI01 402 aa19.54■□□□□ 0.72
HDHD3-202ENST00000374180 HSPA6P17066 643 aa19.54■□□□□ 0.72
HDHD3-202ENST00000374180 CRKP46108 304 aa19.54■□□□□ 0.72
HDHD3-202ENST00000374180 KRT26Q7Z3Y9 468 aa19.54■□□□□ 0.72
HDHD3-202ENST00000374180 USP48Q86UV5 1035 aa19.54■□□□□ 0.72
HDHD3-202ENST00000374180 TEKT1Q969V4 418 aa19.54■□□□□ 0.72
HDHD3-202ENST00000374180 PRMT6Q96LA8 375 aaPredicted RBP19.54■□□□□ 0.72
HDHD3-202ENST00000374180 PCDHAC2Q9Y5I4 1007 aa19.54■□□□□ 0.72
HDHD3-202ENST00000374180 MYH13Q9UKX3 1938 aa19.54■□□□□ 0.72
HDHD3-202ENST00000374180 MYO1BO43795 1136 aa19.54■□□□□ 0.72
HDHD3-202ENST00000374180 SULF1Q8IWU6 871 aa19.54■□□□□ 0.72
HDHD3-202ENST00000374180 GCC1Q96CN9 775 aa19.54■□□□□ 0.72
HDHD3-202ENST00000374180 PASKQ96RG2 1323 aa19.53■□□□□ 0.72
HDHD3-202ENST00000374180 TRAF5O00463 557 aa19.53■□□□□ 0.72
HDHD3-202ENST00000374180 TBC1D9Q6ZT07 1266 aa19.53■□□□□ 0.72
HDHD3-202ENST00000374180 ERICH6Q7L0X2 663 aa19.53■□□□□ 0.72
HDHD3-202ENST00000374180 ZBTB47Q9UFB7 747 aaPredicted RBP19.53■□□□□ 0.72
HDHD3-202ENST00000374180 PITPNM2Q9BZ72 1349 aa19.52■□□□□ 0.72
HDHD3-202ENST00000374180 APLP1P51693 650 aa19.52■□□□□ 0.72
HDHD3-202ENST00000374180 HHIPL2Q6UWX4 724 aa19.52■□□□□ 0.72
HDHD3-202ENST00000374180 LRP2BPQ9P2M1 347 aa19.52■□□□□ 0.72
HDHD3-202ENST00000374180 ZAP70P43403 619 aa19.51■□□□□ 0.71
HDHD3-202ENST00000374180 ANKRD45Q5TZF3 282 aa19.51■□□□□ 0.71
HDHD3-202ENST00000374180 DZIP1Q86YF9 867 aaKnown RBP19.51■□□□□ 0.71
HDHD3-202ENST00000374180 ZDHHC15Q96MV8 337 aa19.51■□□□□ 0.71
HDHD3-202ENST00000374180 ADM5C9JUS6 153 aa19.5■□□□□ 0.71
HDHD3-202ENST00000374180 IGHDP01880 384 aa19.5■□□□□ 0.71
HDHD3-202ENST00000374180 CYP2E1P05181 493 aaPredicted RBP19.5■□□□□ 0.71
HDHD3-202ENST00000374180 FMR1Q06787 632 aaKnown RBP eCLIP19.5■□□□□ 0.71
HDHD3-202ENST00000374180 DIXDC1Q155Q3 683 aa19.5■□□□□ 0.71
HDHD3-202ENST00000374180 SLF2Q8IX21 1173 aa19.5■□□□□ 0.71
HDHD3-202ENST00000374180 TDRD3Q9H7E2 651 aaKnown RBP19.5■□□□□ 0.71
HDHD3-202ENST00000374180 RAI14Q9P0K7 980 aa19.5■□□□□ 0.71
HDHD3-202ENST00000374180 SCAF8Q9UPN6 1271 aaKnown RBP19.5■□□□□ 0.71
HDHD3-202ENST00000374180 CEP350Q5VT06 3117 aa19.5■□□□□ 0.71
HDHD3-202ENST00000374180 CLRN2A0PK11 232 aa19.49■□□□□ 0.71
HDHD3-202ENST00000374180 DLK2Q6UY11 383 aa19.49■□□□□ 0.71
HDHD3-202ENST00000374180 APOBEC3FQ8IUX4 373 aaKnown RBP19.49■□□□□ 0.71
HDHD3-202ENST00000374180 POLR2AP24928 1970 aaKnown RBP19.49■□□□□ 0.71
HDHD3-202ENST00000374180 MECOMQ03112 1051 aa19.48■□□□□ 0.71
HDHD3-202ENST00000374180 APOBEC3HQ6NTF7 200 aaKnown RBP19.48■□□□□ 0.71
HDHD3-202ENST00000374180 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.48■□□□□ 0.71
HDHD3-202ENST00000374180 VEZTQ9HBM0 779 aa19.48■□□□□ 0.71
HDHD3-202ENST00000374180 NDUFB9Q9Y6M9 179 aa19.48■□□□□ 0.71
HDHD3-202ENST00000374180 AOX1Q06278 1338 aa19.48■□□□□ 0.71
HDHD3-202ENST00000374180 ATP5JP18859 108 aa19.48■□□□□ 0.71
HDHD3-202ENST00000374180 GPATCH3Q96I76 525 aa19.48■□□□□ 0.71
HDHD3-202ENST00000374180 ZNF70Q9UC06 446 aaPredicted RBP19.48■□□□□ 0.71
HDHD3-202ENST00000374180 DAGLAQ9Y4D2 1042 aa19.48■□□□□ 0.71
HDHD3-202ENST00000374180 TMEM88BA6NKF7 163 aa19.47■□□□□ 0.71
HDHD3-202ENST00000374180 CELF2O95319 508 aaKnown RBP19.47■□□□□ 0.71
HDHD3-202ENST00000374180 GSTO1P78417 241 aa19.47■□□□□ 0.71
HDHD3-202ENST00000374180 SPDYE2Q495Y8 402 aa19.47■□□□□ 0.71
HDHD3-202ENST00000374180 SMC5Q8IY18 1101 aa19.47■□□□□ 0.71
HDHD3-202ENST00000374180 NSUN4Q96CB9 384 aaKnown RBP19.47■□□□□ 0.71
HDHD3-202ENST00000374180 FAM163AQ96GL9 167 aaPredicted RBP19.47■□□□□ 0.71
HDHD3-202ENST00000374180 BOLA2Q9H3K6 86 aa19.47■□□□□ 0.71
HDHD3-202ENST00000374180 ZNF408Q9H9D4 720 aa19.47■□□□□ 0.71
HDHD3-202ENST00000374180 ECHDC1Q9NTX5 307 aa19.47■□□□□ 0.71
HDHD3-202ENST00000374180 AKAP11Q9UKA4 1901 aa19.46■□□□□ 0.71
HDHD3-202ENST00000374180 LDHCP07864 332 aa19.46■□□□□ 0.71
HDHD3-202ENST00000374180 CST9Q5W186 159 aa19.46■□□□□ 0.71
HDHD3-202ENST00000374180 DNAJC2Q99543 621 aaKnown RBP19.46■□□□□ 0.71
HDHD3-202ENST00000374180 DEFB129Q9H1M3 183 aa19.46■□□□□ 0.71
HDHD3-202ENST00000374180 PIH1D3Q9NQM4 214 aaKnown RBP19.46■□□□□ 0.71
HDHD3-202ENST00000374180 CREBZFQ9NS37 354 aa19.46■□□□□ 0.71
HDHD3-202ENST00000374180 IGSF3O75054 1194 aa19.45■□□□□ 0.7
HDHD3-202ENST00000374180 HTRA3P83110 453 aa19.45■□□□□ 0.7
HDHD3-202ENST00000374180 TTF1Q15361 905 aaPredicted RBP19.45■□□□□ 0.7
HDHD3-202ENST00000374180 B4GALNT3Q6L9W6 998 aa19.45■□□□□ 0.7
HDHD3-202ENST00000374180 ZNF384Q8TF68 577 aa19.45■□□□□ 0.7
HDHD3-202ENST00000374180 CDCA5Q96FF9 252 aa19.45■□□□□ 0.7
HDHD3-202ENST00000374180 ANTXR1Q9H6X2 564 aa19.45■□□□□ 0.7
HDHD3-202ENST00000374180 TMOD2Q9NZR1 351 aa19.45■□□□□ 0.7
HDHD3-202ENST00000374180 IDH1O75874 414 aaKnown RBP19.44■□□□□ 0.7
HDHD3-202ENST00000374180 TNFAIP1Q13829 316 aa19.44■□□□□ 0.7
HDHD3-202ENST00000374180 PRAMEF18Q5VWM3 479 aa19.44■□□□□ 0.7
HDHD3-202ENST00000374180 NAA16Q6N069 864 aaPredicted RBP19.44■□□□□ 0.7
HDHD3-202ENST00000374180 HAUS7Q99871 368 aa19.44■□□□□ 0.7
HDHD3-202ENST00000374180 GAKO14976 1311 aa19.44■□□□□ 0.7
HDHD3-202ENST00000374180 TCP10L2B9ZVM9 353 aa19.43■□□□□ 0.7
HDHD3-202ENST00000374180 GOLIM4O00461 696 aa19.43■□□□□ 0.7
HDHD3-202ENST00000374180 MAP3K12Q12852 859 aa19.43■□□□□ 0.7
HDHD3-202ENST00000374180 CDC42EP5Q6NZY7 148 aa19.43■□□□□ 0.7
HDHD3-202ENST00000374180 USP40Q9NVE5 1235 aa19.43■□□□□ 0.7
HDHD3-202ENST00000374180 MROH7-TTC4A0A0A0MT08 1334 aa19.43■□□□□ 0.7
HDHD3-202ENST00000374180 TNNI2P48788 182 aa19.42■□□□□ 0.7
HDHD3-202ENST00000374180 CACNB3P54284 484 aa19.42■□□□□ 0.7
HDHD3-202ENST00000374180 RASA3Q14644 834 aa19.42■□□□□ 0.7
HDHD3-202ENST00000374180 OTUD7AQ8TE49 926 aaPredicted RBP19.42■□□□□ 0.7
HDHD3-202ENST00000374180 PAG1Q9NWQ8 432 aa19.42■□□□□ 0.7
HDHD3-202ENST00000374180 PPP2R3BQ9Y5P8 575 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms