RNA–Protein interactions for RNA: ENST00000373492.6

PBX3-205, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-205ENST00000373492 UQCRFS1P1P0C7P4 283 aa22.48■■□□□ 1.19
PBX3-205ENST00000373492 DLGAP5Q15398 846 aa22.48■■□□□ 1.19
PBX3-205ENST00000373492 TTC39AQ5SRH9 613 aa22.48■■□□□ 1.19
PBX3-205ENST00000373492 CELF2O95319 508 aaKnown RBP22.47■■□□□ 1.19
PBX3-205ENST00000373492 DBNLQ9UJU6 430 aaKnown RBP22.47■■□□□ 1.19
PBX3-205ENST00000373492 MYH7P12883 1935 aa22.47■■□□□ 1.19
PBX3-205ENST00000373492 TRPM7Q96QT4 1865 aa22.46■■□□□ 1.19
PBX3-205ENST00000373492 ARID4AP29374 1257 aaPredicted RBP22.46■■□□□ 1.19
PBX3-205ENST00000373492 WDR66Q8TBY9 1149 aa22.46■■□□□ 1.19
PBX3-205ENST00000373492 TTF2Q9UNY4 1162 aaKnown RBP22.46■■□□□ 1.19
PBX3-205ENST00000373492 SUGT1Q9Y2Z0 365 aa22.46■■□□□ 1.19
PBX3-205ENST00000373492 ADM5C9JUS6 153 aa22.45■■□□□ 1.18
PBX3-205ENST00000373492 SMARCA5O60264 1052 aaPredicted RBP22.45■■□□□ 1.18
PBX3-205ENST00000373492 CFAP100Q494V2 611 aa22.45■■□□□ 1.18
PBX3-205ENST00000373492 SERPINA10Q9UK55 444 aa22.45■■□□□ 1.18
PBX3-205ENST00000373492 ABT1Q9ULW3 272 aaKnown RBP22.45■■□□□ 1.18
PBX3-205ENST00000373492 CNTNAP1P78357 1384 aa22.45■■□□□ 1.18
PBX3-205ENST00000373492 DOCK2Q92608 1830 aa22.45■■□□□ 1.18
PBX3-205ENST00000373492 RASSF10A6NK89 507 aa22.44■■□□□ 1.18
PBX3-205ENST00000373492 COL1A1P02452 1464 aaPredicted RBP22.44■■□□□ 1.18
PBX3-205ENST00000373492 PDS5AQ29RF7 1337 aaKnown RBP22.44■■□□□ 1.18
PBX3-205ENST00000373492 JMYQ8N9B5 988 aa22.44■■□□□ 1.18
PBX3-205ENST00000373492 TLR7Q9NYK1 1049 aaKnown RBP22.44■■□□□ 1.18
PBX3-205ENST00000373492 MAST2Q6P0Q8 1798 aa22.43■■□□□ 1.18
PBX3-205ENST00000373492 SPDYE2BA6NHP3 402 aa22.43■■□□□ 1.18
PBX3-205ENST00000373492 MYO1BO43795 1136 aa22.43■■□□□ 1.18
PBX3-205ENST00000373492 SPDYE6P0CI01 402 aa22.43■■□□□ 1.18
PBX3-205ENST00000373492 HDLBPQ00341 1268 aaKnown RBP22.43■■□□□ 1.18
PBX3-205ENST00000373492 RASGRF1Q13972 1273 aa22.43■■□□□ 1.18
PBX3-205ENST00000373492 ZGPATQ8N5A5 531 aaKnown RBP22.43■■□□□ 1.18
PBX3-205ENST00000373492 MRIQ9BWK5 157 aa22.43■■□□□ 1.18
PBX3-205ENST00000373492 ZNF408Q9H9D4 720 aa22.43■■□□□ 1.18
PBX3-205ENST00000373492 MKRN1Q9UHC7 482 aaKnown RBP22.43■■□□□ 1.18
PBX3-205ENST00000373492 TLL2Q9Y6L7 1015 aa22.43■■□□□ 1.18
PBX3-205ENST00000373492 MAST3O60307 1309 aa22.42■■□□□ 1.18
PBX3-205ENST00000373492 RBM5P52756 815 aaKnown RBP eCLIP22.42■■□□□ 1.18
PBX3-205ENST00000373492 DEFB115Q30KQ5 88 aa22.42■■□□□ 1.18
PBX3-205ENST00000373492 APOBEC3FQ8IUX4 373 aaKnown RBP22.42■■□□□ 1.18
PBX3-205ENST00000373492 ZNF512BQ96KM6 892 aaPredicted RBP22.42■■□□□ 1.18
PBX3-205ENST00000373492 SALL1Q9NSC2 1324 aa22.41■■□□□ 1.18
PBX3-205ENST00000373492 IGHDP01880 384 aa22.41■■□□□ 1.18
PBX3-205ENST00000373492 MCAMP43121 646 aa22.41■■□□□ 1.18
PBX3-205ENST00000373492 ANKRD45Q5TZF3 282 aa22.41■■□□□ 1.18
PBX3-205ENST00000373492 DLK2Q6UY11 383 aa22.41■■□□□ 1.18
PBX3-205ENST00000373492 SPATA5Q8NB90 893 aa22.41■■□□□ 1.18
PBX3-205ENST00000373492 CDCA5Q96FF9 252 aa22.41■■□□□ 1.18
PBX3-205ENST00000373492 PRMT6Q96LA8 375 aaPredicted RBP22.41■■□□□ 1.18
PBX3-205ENST00000373492 HMG20BQ9P0W2 317 aa22.41■■□□□ 1.18
PBX3-205ENST00000373492 AK9Q5TCS8 1911 aa22.41■■□□□ 1.18
PBX3-205ENST00000373492 CRKP46108 304 aa22.4■■□□□ 1.18
PBX3-205ENST00000373492 GRIK5Q16478 980 aa22.4■■□□□ 1.18
PBX3-205ENST00000373492 SAPCD2Q86UD0 394 aa22.4■■□□□ 1.18
PBX3-205ENST00000373492 SMC5Q8IY18 1101 aa22.4■■□□□ 1.18
PBX3-205ENST00000373492 HHIPL1Q96JK4 782 aa22.4■■□□□ 1.18
PBX3-205ENST00000373492 PCDHAC2Q9Y5I4 1007 aa22.4■■□□□ 1.18
PBX3-205ENST00000373492 SPTY2D1Q68D10 685 aaPredicted RBP22.39■■□□□ 1.17
PBX3-205ENST00000373492 C2orf69Q8N8R5 385 aa22.39■■□□□ 1.17
PBX3-205ENST00000373492 GPATCH3Q96I76 525 aa22.39■■□□□ 1.17
PBX3-205ENST00000373492 GBA2Q9HCG7 927 aaPredicted RBP22.39■■□□□ 1.17
PBX3-205ENST00000373492 LDHBP07195 334 aaKnown RBP22.38■■□□□ 1.17
PBX3-205ENST00000373492 VEGFBP49765 207 aa22.38■■□□□ 1.17
PBX3-205ENST00000373492 TEKT1Q969V4 418 aa22.38■■□□□ 1.17
PBX3-205ENST00000373492 ABCF2Q9UG63 623 aa22.38■■□□□ 1.17
PBX3-205ENST00000373492 HHIPL2Q6UWX4 724 aa22.37■■□□□ 1.17
PBX3-205ENST00000373492 SNRKQ9NRH2 765 aa22.37■■□□□ 1.17
PBX3-205ENST00000373492 SCAF8Q9UPN6 1271 aaKnown RBP22.37■■□□□ 1.17
PBX3-205ENST00000373492 PPP2R3BQ9Y5P8 575 aa22.37■■□□□ 1.17
PBX3-205ENST00000373492 ECE1P42892 770 aa22.36■■□□□ 1.17
PBX3-205ENST00000373492 FKBP1BP68106 108 aa22.36■■□□□ 1.17
PBX3-205ENST00000373492 SPDYE2Q495Y8 402 aa22.36■■□□□ 1.17
PBX3-205ENST00000373492 B4GALNT3Q6L9W6 998 aa22.36■■□□□ 1.17
PBX3-205ENST00000373492 PI16Q6UXB8 463 aa22.36■■□□□ 1.17
PBX3-205ENST00000373492 ERICH6Q7L0X2 663 aa22.36■■□□□ 1.17
PBX3-205ENST00000373492 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.36■■□□□ 1.17
PBX3-205ENST00000373492 ZDHHC15Q96MV8 337 aa22.36■■□□□ 1.17
PBX3-205ENST00000373492 DEFB129Q9H1M3 183 aa22.36■■□□□ 1.17
PBX3-205ENST00000373492 CLRN2A0PK11 232 aa22.35■■□□□ 1.17
PBX3-205ENST00000373492 PRDX5P30044 214 aa22.35■■□□□ 1.17
PBX3-205ENST00000373492 ZNF70Q9UC06 446 aaPredicted RBP22.35■■□□□ 1.17
PBX3-205ENST00000373492 WDR33Q9C0J8 1336 aaKnown RBP22.34■■□□□ 1.17
PBX3-205ENST00000373492 ATP5JP18859 108 aa22.34■■□□□ 1.17
PBX3-205ENST00000373492 NF2P35240 595 aa22.34■■□□□ 1.17
PBX3-205ENST00000373492 ZAP70P43403 619 aa22.34■■□□□ 1.17
PBX3-205ENST00000373492 HUNKP57058 714 aa22.34■■□□□ 1.17
PBX3-205ENST00000373492 TNFAIP1Q13829 316 aa22.34■■□□□ 1.17
PBX3-205ENST00000373492 DZIP1Q86YF9 867 aaKnown RBP22.34■■□□□ 1.17
PBX3-205ENST00000373492 VEZTQ9HBM0 779 aa22.34■■□□□ 1.17
PBX3-205ENST00000373492 ECHDC1Q9NTX5 307 aa22.34■■□□□ 1.17
PBX3-205ENST00000373492 AOX1Q06278 1338 aa22.33■■□□□ 1.17
PBX3-205ENST00000373492 CDK5RAP2Q96SN8 1893 aa22.33■■□□□ 1.17
PBX3-205ENST00000373492 PRAMEF18Q5VWM3 479 aa22.33■■□□□ 1.17
PBX3-205ENST00000373492 PAXIP1Q6ZW49 1069 aaPredicted RBP22.33■■□□□ 1.17
PBX3-205ENST00000373492 SLF2Q8IX21 1173 aa22.33■■□□□ 1.17
PBX3-205ENST00000373492 CAPNS2Q96L46 248 aa22.33■■□□□ 1.17
PBX3-205ENST00000373492 TDRD3Q9H7E2 651 aaKnown RBP22.33■■□□□ 1.17
PBX3-205ENST00000373492 LRP2BPQ9P2M1 347 aa22.33■■□□□ 1.17
PBX3-205ENST00000373492 PCNTO95613 3336 aa22.33■■□□□ 1.17
PBX3-205ENST00000373492 TTC41PQ6P2S7 1318 aa22.32■■□□□ 1.16
PBX3-205ENST00000373492 CYP2E1P05181 493 aaPredicted RBP22.32■■□□□ 1.16
PBX3-205ENST00000373492 NUCB1Q02818 461 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms