RNA–Protein interactions for RNA: ENST00000373388.6

CSMD2-206, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSMD2, Length 13,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-206ENST00000373388 CCDC141Q6ZP82 1450 aa7.86□□□□□ -1.15
CSMD2-206ENST00000373388 IDEP14735 1019 aa7.86□□□□□ -1.15
CSMD2-206ENST00000373388 CCDC144CPQ8IYA2 1237 aa7.86□□□□□ -1.15
CSMD2-206ENST00000373388 PNISRQ8TF01 805 aaKnown RBP7.86□□□□□ -1.15
CSMD2-206ENST00000373388 TFIP11Q9UBB9 837 aaKnown RBP7.86□□□□□ -1.15
CSMD2-206ENST00000373388 HNRNPCP07910 306 aaKnown RBP eCLIP7.86□□□□□ -1.15
CSMD2-206ENST00000373388 ZNF569Q5MCW4 686 aa7.86□□□□□ -1.15
CSMD2-206ENST00000373388 RIC3Q7Z5B4 369 aa7.86□□□□□ -1.15
CSMD2-206ENST00000373388 GABPB2Q8TAK5 448 aaPredicted RBP7.86□□□□□ -1.15
CSMD2-206ENST00000373388 TOP2AP11388 1531 aaKnown RBP7.86□□□□□ -1.15
CSMD2-206ENST00000373388 FAM160A1Q05DH4 1040 aa7.86□□□□□ -1.15
CSMD2-206ENST00000373388 SDCCAG3Q96C92 435 aa7.86□□□□□ -1.15
CSMD2-206ENST00000373388 SLFNL1Q499Z3 407 aa7.86□□□□□ -1.15
CSMD2-206ENST00000373388 TEX11Q8IYF3 940 aa7.86□□□□□ -1.15
CSMD2-206ENST00000373388 CCDC197Q8NCU1 140 aa7.86□□□□□ -1.15
CSMD2-206ENST00000373388 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.86□□□□□ -1.15
CSMD2-206ENST00000373388 ZHX3Q9H4I2 956 aa7.86□□□□□ -1.15
CSMD2-206ENST00000373388 SEL1L2Q5TEA6 688 aa7.86□□□□□ -1.15
CSMD2-206ENST00000373388 FERMT3Q86UX7 667 aa7.86□□□□□ -1.15
CSMD2-206ENST00000373388 CCDC63Q8NA47 563 aa7.86□□□□□ -1.15
CSMD2-206ENST00000373388 SEC63Q9UGP8 760 aaKnown RBP7.86□□□□□ -1.15
CSMD2-206ENST00000373388 RTL1A6NKG5 1358 aa7.86□□□□□ -1.15
CSMD2-206ENST00000373388 AKR1B15C9JRZ8 316 aaPredicted RBP7.86□□□□□ -1.15
CSMD2-206ENST00000373388 RANBP1P43487 201 aa7.86□□□□□ -1.15
CSMD2-206ENST00000373388 ATICP31939 592 aa7.86□□□□□ -1.15
CSMD2-206ENST00000373388 E2F4Q16254 413 aa7.86□□□□□ -1.15
CSMD2-206ENST00000373388 MAP7D3Q8IWC1 876 aa7.86□□□□□ -1.15
CSMD2-206ENST00000373388 CCDC122Q5T0U0 273 aa7.86□□□□□ -1.15
CSMD2-206ENST00000373388 C6orf118Q5T5N4 469 aa7.86□□□□□ -1.15
CSMD2-206ENST00000373388 ZNF653Q96CK0 615 aa7.86□□□□□ -1.15
CSMD2-206ENST00000373388 TRIM47Q96LD4 638 aa7.86□□□□□ -1.15
CSMD2-206ENST00000373388 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.86□□□□□ -1.15
CSMD2-206ENST00000373388 MYO18AQ92614 2054 aaKnown RBP7.86□□□□□ -1.15
CSMD2-206ENST00000373388 ZNF830Q96NB3 372 aaPredicted RBP7.85□□□□□ -1.15
CSMD2-206ENST00000373388 TMED10P49755 219 aaKnown RBP7.85□□□□□ -1.15
CSMD2-206ENST00000373388 LGSNQ5TDP6 509 aa7.85□□□□□ -1.15
CSMD2-206ENST00000373388 UBL4BQ8N7F7 174 aa7.85□□□□□ -1.15
CSMD2-206ENST00000373388 C10orf88Q9H8K7 445 aa7.85□□□□□ -1.15
CSMD2-206ENST00000373388 CYP26C1Q6V0L0 522 aa7.85□□□□□ -1.15
CSMD2-206ENST00000373388 MSANTD4Q8NCY6 345 aa7.85□□□□□ -1.15
CSMD2-206ENST00000373388 TUBB6Q9BUF5 446 aa7.85□□□□□ -1.15
CSMD2-206ENST00000373388 ZNF287Q9HBT7 754 aa7.85□□□□□ -1.15
CSMD2-206ENST00000373388 GUCA1BQ9UMX6 200 aa7.85□□□□□ -1.15
CSMD2-206ENST00000373388 KRT75O95678 551 aa7.85□□□□□ -1.15
CSMD2-206ENST00000373388 CFAP221Q4G0U5 840 aa7.85□□□□□ -1.15
CSMD2-206ENST00000373388 BICDL1Q6ZP65 573 aa7.85□□□□□ -1.15
CSMD2-206ENST00000373388 TCP11Q8WWU5 503 aa7.85□□□□□ -1.15
CSMD2-206ENST00000373388 EFHD1Q9BUP0 239 aa7.85□□□□□ -1.15
CSMD2-206ENST00000373388 RAB17Q9H0T7 212 aa7.85□□□□□ -1.15
CSMD2-206ENST00000373388 MAP3K7O43318 606 aa7.85□□□□□ -1.15
CSMD2-206ENST00000373388 ALDH1L2Q3SY69 923 aa7.85□□□□□ -1.15
CSMD2-206ENST00000373388 RSPH3Q86UC2 560 aa7.85□□□□□ -1.15
CSMD2-206ENST00000373388 DRP2Q13474 957 aa7.85□□□□□ -1.15
CSMD2-206ENST00000373388 NOX5Q96PH1 765 aa7.85□□□□□ -1.15
CSMD2-206ENST00000373388 TCP11L1Q9NUJ3 509 aa7.85□□□□□ -1.15
CSMD2-206ENST00000373388 TSC22D4Q9Y3Q8 395 aa7.85□□□□□ -1.15
CSMD2-206ENST00000373388 PALM3A6NDB9 673 aaPredicted RBP7.85□□□□□ -1.15
CSMD2-206ENST00000373388 CCDC159P0C7I6 412 aa7.85□□□□□ -1.15
CSMD2-206ENST00000373388 POLE2P56282 527 aa7.85□□□□□ -1.15
CSMD2-206ENST00000373388 SRGAP1Q7Z6B7 1085 aa7.85□□□□□ -1.15
CSMD2-206ENST00000373388 TERF2Q15554 542 aa7.85□□□□□ -1.15
CSMD2-206ENST00000373388 VWA3BQ502W6 1294 aa7.85□□□□□ -1.15
CSMD2-206ENST00000373388 CERS3Q8IU89 383 aa7.85□□□□□ -1.15
CSMD2-206ENST00000373388 RASSF10A6NK89 507 aa7.85□□□□□ -1.15
CSMD2-206ENST00000373388 GIMAP6Q6P9H5 292 aa7.85□□□□□ -1.15
CSMD2-206ENST00000373388 LCA5Q86VQ0 697 aa7.85□□□□□ -1.15
CSMD2-206ENST00000373388 TMCO5AQ8N6Q1 288 aa7.85□□□□□ -1.15
CSMD2-206ENST00000373388 KIFC3Q9BVG8 833 aa7.85□□□□□ -1.15
CSMD2-206ENST00000373388 EXOC1Q9NV70 894 aa7.85□□□□□ -1.15
CSMD2-206ENST00000373388 PPP1R2P41236 205 aa7.84□□□□□ -1.15
CSMD2-206ENST00000373388 GNGT1P63211 74 aa7.84□□□□□ -1.15
CSMD2-206ENST00000373388 CXorf56Q9H5V9 222 aa7.84□□□□□ -1.15
CSMD2-206ENST00000373388 ZNF644Q9H582 1327 aaPredicted RBP7.84□□□□□ -1.15
CSMD2-206ENST00000373388 FRMD3A2A2Y4 597 aa7.84□□□□□ -1.15
CSMD2-206ENST00000373388 RGS16O15492 202 aaPredicted RBP7.84□□□□□ -1.15
CSMD2-206ENST00000373388 ACBD5Q5T8D3 534 aaPredicted RBP7.84□□□□□ -1.15
CSMD2-206ENST00000373388 APOEP02649 317 aa7.84□□□□□ -1.15
CSMD2-206ENST00000373388 PODNQ7Z5L7 613 aa7.84□□□□□ -1.15
CSMD2-206ENST00000373388 CPLX3Q8WVH0 158 aa7.84□□□□□ -1.15
CSMD2-206ENST00000373388 GSTA5Q7RTV2 222 aa7.84□□□□□ -1.15
CSMD2-206ENST00000373388 SYCE1Q8N0S2 351 aa7.84□□□□□ -1.15
CSMD2-206ENST00000373388 STAMBPL1Q96FJ0 436 aa7.84□□□□□ -1.15
CSMD2-206ENST00000373388 ARHGAP42A6NI28 874 aa7.84□□□□□ -1.15
CSMD2-206ENST00000373388 FAM177BA6PVY3 158 aa7.84□□□□□ -1.15
CSMD2-206ENST00000373388 NLRP7Q8WX94 980 aa7.84□□□□□ -1.15
CSMD2-206ENST00000373388 RBM27Q9P2N5 1060 aaKnown RBP7.84□□□□□ -1.15
CSMD2-206ENST00000373388 HARSP12081 509 aaKnown RBP7.84□□□□□ -1.15
CSMD2-206ENST00000373388 DHX9Q08211 1270 aaKnown RBP7.84□□□□□ -1.15
CSMD2-206ENST00000373388 STK38LQ9Y2H1 464 aa7.84□□□□□ -1.15
CSMD2-206ENST00000373388 LONP1P36776 959 aaKnown RBP7.84□□□□□ -1.15
CSMD2-206ENST00000373388 SNX16P57768 344 aa7.84□□□□□ -1.15
CSMD2-206ENST00000373388 FGD4Q96M96 766 aa7.84□□□□□ -1.15
CSMD2-206ENST00000373388 WDR97A6NE52 1622 aa7.84□□□□□ -1.15
CSMD2-206ENST00000373388 ANKRD2Q9GZV1 360 aa7.84□□□□□ -1.15
CSMD2-206ENST00000373388 ORC6Q9Y5N6 252 aa7.84□□□□□ -1.15
CSMD2-206ENST00000373388 TAF11Q15544 211 aa7.84□□□□□ -1.15
CSMD2-206ENST00000373388 MYSM1Q5VVJ2 828 aa7.84□□□□□ -1.15
CSMD2-206ENST00000373388 TCP11L2Q8N4U5 519 aa7.84□□□□□ -1.15
CSMD2-206ENST00000373388 SECISBP2LQ93073 1101 aaKnown RBP7.84□□□□□ -1.15
CSMD2-206ENST00000373388 ATP6V0A2Q9Y487 856 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms