RNA–Protein interactions for RNA: ENST00000371781.3

LCN1-202, Transcript of lipocalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCN1, Length 764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1-202ENST00000371781 NSUN4Q96CB9 384 aaKnown RBP13.09□□□□□ -0.31
LCN1-202ENST00000371781 WDR90Q96KV7 1748 aa13.09□□□□□ -0.31
LCN1-202ENST00000371781 MXD3Q9BW11 206 aa13.09□□□□□ -0.31
LCN1-202ENST00000371781 COA1Q9GZY4 146 aa13.09□□□□□ -0.31
LCN1-202ENST00000371781 DBNDD1Q9H9R9 158 aa13.09□□□□□ -0.31
LCN1-202ENST00000371781 KCNQ5Q9NR82 932 aa13.09□□□□□ -0.31
LCN1-202ENST00000371781 PIM2Q9P1W9 311 aa13.09□□□□□ -0.31
LCN1-202ENST00000371781 ABCF2Q9UG63 623 aa13.09□□□□□ -0.31
LCN1-202ENST00000371781 RBM8AQ9Y5S9 174 aaKnown RBP13.09□□□□□ -0.31
LCN1-202ENST00000371781 MYH2Q9UKX2 1941 aa13.09□□□□□ -0.31
LCN1-202ENST00000371781 EPB41L2O43491 1005 aaKnown RBP13.08□□□□□ -0.32
LCN1-202ENST00000371781 CD2BP2O95400 341 aaKnown RBP13.08□□□□□ -0.32
LCN1-202ENST00000371781 MECOMQ03112 1051 aa13.08□□□□□ -0.32
LCN1-202ENST00000371781 NECTIN1Q15223 517 aa13.08□□□□□ -0.32
LCN1-202ENST00000371781 LCORLQ8N3X6 602 aa13.08□□□□□ -0.32
LCN1-202ENST00000371781 PSMD1Q99460 953 aa13.08□□□□□ -0.32
LCN1-202ENST00000371781 RIOK1Q9BRS2 568 aaKnown RBP13.08□□□□□ -0.32
LCN1-202ENST00000371781 UPF2Q9HAU5 1272 aaKnown RBP13.08□□□□□ -0.32
LCN1-202ENST00000371781 EPB41L4AQ9HCS5 686 aaPredicted RBP13.08□□□□□ -0.32
LCN1-202ENST00000371781 RPAP1Q9BWH6 1393 aaPredicted RBP13.07□□□□□ -0.32
LCN1-202ENST00000371781 ECE2O60344 883 aa13.07□□□□□ -0.32
LCN1-202ENST00000371781 MBD4O95243 580 aa13.07□□□□□ -0.32
LCN1-202ENST00000371781 MAP3K12Q12852 859 aa13.07□□□□□ -0.32
LCN1-202ENST00000371781 DALRD3Q5D0E6 543 aaKnown RBP13.07□□□□□ -0.32
LCN1-202ENST00000371781 EYA3Q99504 573 aa13.07□□□□□ -0.32
LCN1-202ENST00000371781 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.07□□□□□ -0.32
LCN1-202ENST00000371781 ARMT1Q9H993 441 aa13.07□□□□□ -0.32
LCN1-202ENST00000371781 RAI14Q9P0K7 980 aa13.07□□□□□ -0.32
LCN1-202ENST00000371781 LRP2BPQ9P2M1 347 aa13.07□□□□□ -0.32
LCN1-202ENST00000371781 SNX14Q9Y5W7 946 aa13.07□□□□□ -0.32
LCN1-202ENST00000371781 SBF1O95248 1867 aa13.07□□□□□ -0.32
LCN1-202ENST00000371781 LAMB1P07942 1786 aa13.07□□□□□ -0.32
LCN1-202ENST00000371781 NAV1Q8NEY1 1877 aa13.06□□□□□ -0.32
LCN1-202ENST00000371781 SLC27A2O14975 620 aa13.06□□□□□ -0.32
LCN1-202ENST00000371781 PRKAB2O43741 272 aa13.06□□□□□ -0.32
LCN1-202ENST00000371781 HSPD1P10809 573 aaKnown RBP13.06□□□□□ -0.32
LCN1-202ENST00000371781 CYP7A1P22680 504 aa13.06□□□□□ -0.32
LCN1-202ENST00000371781 DYNLL1P63167 89 aaKnown RBP13.06□□□□□ -0.32
LCN1-202ENST00000371781 GTF2IP78347 998 aa13.06□□□□□ -0.32
LCN1-202ENST00000371781 RASSF7Q02833 373 aa13.06□□□□□ -0.32
LCN1-202ENST00000371781 DIXDC1Q155Q3 683 aa13.06□□□□□ -0.32
LCN1-202ENST00000371781 CREB3L3Q68CJ9 461 aa13.06□□□□□ -0.32
LCN1-202ENST00000371781 TTLL5Q6EMB2 1281 aa13.06□□□□□ -0.32
LCN1-202ENST00000371781 MIGA1Q8NAN2 632 aa13.06□□□□□ -0.32
LCN1-202ENST00000371781 WDR66Q8TBY9 1149 aa13.06□□□□□ -0.32
LCN1-202ENST00000371781 STRBPQ96SI9 672 aaKnown RBP13.06□□□□□ -0.32
LCN1-202ENST00000371781 ZC3H12CQ9C0D7 883 aaKnown RBP13.06□□□□□ -0.32
LCN1-202ENST00000371781 ZNF277Q9NRM2 450 aaPredicted RBP13.06□□□□□ -0.32
LCN1-202ENST00000371781 BCS1LQ9Y276 419 aa13.06□□□□□ -0.32
LCN1-202ENST00000371781 FOCADQ5VW36 1801 aa13.06□□□□□ -0.32
LCN1-202ENST00000371781 PPIP5K2O43314 1243 aa13.05□□□□□ -0.32
LCN1-202ENST00000371781 FRAT2O75474 233 aaPredicted RBP13.05□□□□□ -0.32
LCN1-202ENST00000371781 ADCK5Q3MIX3 580 aa13.05□□□□□ -0.32
LCN1-202ENST00000371781 DACT2Q5SW24 774 aa13.05□□□□□ -0.32
LCN1-202ENST00000371781 ZSCAN25Q6NSZ9 544 aa13.05□□□□□ -0.32
LCN1-202ENST00000371781 STOX1Q6ZVD7 989 aa13.05□□□□□ -0.32
LCN1-202ENST00000371781 ERICH6Q7L0X2 663 aa13.05□□□□□ -0.32
LCN1-202ENST00000371781 NKX2-3Q8TAU0 364 aa13.05□□□□□ -0.32
LCN1-202ENST00000371781 DSCC1Q9BVC3 393 aa13.05□□□□□ -0.32
LCN1-202ENST00000371781 NBPF3Q9H094 633 aa13.05□□□□□ -0.32
LCN1-202ENST00000371781 BAZ2AQ9UIF9 1905 aaKnown RBP13.05□□□□□ -0.32
LCN1-202ENST00000371781 SMIM22K7EJ46 135 aa13.04□□□□□ -0.32
LCN1-202ENST00000371781 CYP21A2P08686 494 aa13.04□□□□□ -0.32
LCN1-202ENST00000371781 MFSD14BQ5SR56 506 aa13.04□□□□□ -0.32
LCN1-202ENST00000371781 NAA16Q6N069 864 aaPredicted RBP13.04□□□□□ -0.32
LCN1-202ENST00000371781 RTKN2Q8IZC4 609 aa13.04□□□□□ -0.32
LCN1-202ENST00000371781 TACC3Q9Y6A5 838 aa13.04□□□□□ -0.32
LCN1-202ENST00000371781 GAKO14976 1311 aa13.04□□□□□ -0.32
LCN1-202ENST00000371781 GSG1L2A8MUP6 293 aa13.03□□□□□ -0.32
LCN1-202ENST00000371781 CPA1P15085 419 aa13.03□□□□□ -0.32
LCN1-202ENST00000371781 ANAPC15P60006 121 aa13.03□□□□□ -0.32
LCN1-202ENST00000371781 EVX2Q03828 476 aa13.03□□□□□ -0.32
LCN1-202ENST00000371781 LRRFIP1Q32MZ4 808 aaKnown RBP13.03□□□□□ -0.32
LCN1-202ENST00000371781 KIAA1211Q6ZU35 1233 aa13.03□□□□□ -0.32
LCN1-202ENST00000371781 SUPT20HQ8NEM7 779 aa13.03□□□□□ -0.32
LCN1-202ENST00000371781 NMRK2Q9NPI5 230 aa13.03□□□□□ -0.32
LCN1-202ENST00000371781 PCDHAC2Q9Y5I4 1007 aa13.03□□□□□ -0.32
LCN1-202ENST00000371781 ECM29Q5VYK3 1845 aa13.03□□□□□ -0.32
LCN1-202ENST00000371781 MROH7-TTC4A0A0A0MT08 1334 aa13.03□□□□□ -0.32
LCN1-202ENST00000371781 EIF5BO60841 1220 aaKnown RBP13.02□□□□□ -0.33
LCN1-202ENST00000371781 TOMM70O94826 608 aa13.02□□□□□ -0.33
LCN1-202ENST00000371781 LDHBP07195 334 aaKnown RBP13.02□□□□□ -0.33
LCN1-202ENST00000371781 ANP32AP39687 249 aaKnown RBP13.02□□□□□ -0.33
LCN1-202ENST00000371781 IARSP41252 1262 aaKnown RBP13.02□□□□□ -0.33
LCN1-202ENST00000371781 APLP1P51693 650 aa13.02□□□□□ -0.33
LCN1-202ENST00000371781 GRIPAP1Q4V328 841 aa13.02□□□□□ -0.33
LCN1-202ENST00000371781 ARHGAP27Q6ZUM4 889 aa13.02□□□□□ -0.33
LCN1-202ENST00000371781 PODNQ7Z5L7 613 aa13.02□□□□□ -0.33
LCN1-202ENST00000371781 TBC1D2Q9BYX2 928 aa13.02□□□□□ -0.33
LCN1-202ENST00000371781 TMX4Q9H1E5 349 aaPredicted RBP13.02□□□□□ -0.33
LCN1-202ENST00000371781 U3KPZ7 1027 aaPredicted RBP13.02□□□□□ -0.33
LCN1-202ENST00000371781 LTBP3Q9NS15 1303 aa13.02□□□□□ -0.33
LCN1-202ENST00000371781 DICER1Q9UPY3 1922 aaKnown RBP13.01□□□□□ -0.33
LCN1-202ENST00000371781 MAGEB6P1A0A0J9YX57 407 aa13.01□□□□□ -0.33
LCN1-202ENST00000371781 FGAP02671 866 aa13.01□□□□□ -0.33
LCN1-202ENST00000371781 RABEP1Q15276 862 aa13.01□□□□□ -0.33
LCN1-202ENST00000371781 SOGA3Q5TF21 947 aa13.01□□□□□ -0.33
LCN1-202ENST00000371781 DZIP1Q86YF9 867 aaKnown RBP13.01□□□□□ -0.33
LCN1-202ENST00000371781 TBC1D10CQ8IV04 446 aa13.01□□□□□ -0.33
LCN1-202ENST00000371781 ZGPATQ8N5A5 531 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms