RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 IFIT3O14879 490 aaKnown RBP13.75□□□□□ -0.21
PDE6C-201ENST00000371447 CHRNDQ07001 517 aa13.75□□□□□ -0.21
PDE6C-201ENST00000371447 MAP3K12Q12852 859 aa13.75□□□□□ -0.21
PDE6C-201ENST00000371447 STK38Q15208 465 aa13.75□□□□□ -0.21
PDE6C-201ENST00000371447 ZNF34Q8IZ26 560 aa13.75□□□□□ -0.21
PDE6C-201ENST00000371447 TRIM5Q9C035 493 aa13.75□□□□□ -0.21
PDE6C-201ENST00000371447 CYP2D7A0A087X1C5 515 aa13.74□□□□□ -0.21
PDE6C-201ENST00000371447 CCDC152Q4G0S7 254 aa13.74□□□□□ -0.21
PDE6C-201ENST00000371447 TMEM67Q5HYA8 995 aa13.74□□□□□ -0.21
PDE6C-201ENST00000371447 CCDC73Q6ZRK6 1079 aa13.74□□□□□ -0.21
PDE6C-201ENST00000371447 ZKSCAN5Q9Y2L8 839 aa13.74□□□□□ -0.21
PDE6C-201ENST00000371447 CLIC4Q9Y696 253 aa13.74□□□□□ -0.21
PDE6C-201ENST00000371447 METAP2P50579 478 aaKnown RBP eCLIP13.74□□□□□ -0.21
PDE6C-201ENST00000371447 LCORLQ8N3X6 602 aa13.74□□□□□ -0.21
PDE6C-201ENST00000371447 KIF3AQ9Y496 699 aa13.74□□□□□ -0.21
PDE6C-201ENST00000371447 TNS2Q63HR2 1409 aa13.74□□□□□ -0.21
PDE6C-201ENST00000371447 LETM1O95202 739 aaPredicted RBP13.74□□□□□ -0.21
PDE6C-201ENST00000371447 CYP7A1P22680 504 aa13.74□□□□□ -0.21
PDE6C-201ENST00000371447 HMGN5P82970 282 aaKnown RBP13.74□□□□□ -0.21
PDE6C-201ENST00000371447 GOLPH3LQ9H4A5 285 aa13.74□□□□□ -0.21
PDE6C-201ENST00000371447 NOL7Q9UMY1 257 aaKnown RBP13.74□□□□□ -0.21
PDE6C-201ENST00000371447 NEDD4P46934 1319 aa13.73□□□□□ -0.21
PDE6C-201ENST00000371447 SPATA31A1Q5TZJ5 1347 aa13.73□□□□□ -0.21
PDE6C-201ENST00000371447 ADAMTS7Q9UKP4 1686 aa13.73□□□□□ -0.21
PDE6C-201ENST00000371447 ZSCAN25Q6NSZ9 544 aa13.73□□□□□ -0.21
PDE6C-201ENST00000371447 SYNE3Q6ZMZ3 975 aa13.73□□□□□ -0.21
PDE6C-201ENST00000371447 VGLL2Q8N8G2 317 aa13.73□□□□□ -0.21
PDE6C-201ENST00000371447 PLA2G12BQ9BX93 195 aa13.73□□□□□ -0.21
PDE6C-201ENST00000371447 NBPF3Q9H094 633 aa13.73□□□□□ -0.21
PDE6C-201ENST00000371447 MRVI1Q9Y6F6 885 aa13.73□□□□□ -0.21
PDE6C-201ENST00000371447 RIC1Q4ADV7 1423 aa13.73□□□□□ -0.21
PDE6C-201ENST00000371447 CARMIL3Q8ND23 1372 aa13.73□□□□□ -0.21
PDE6C-201ENST00000371447 CAMTA2O94983 1202 aa13.73□□□□□ -0.21
PDE6C-201ENST00000371447 ZNF165P49910 485 aa13.73□□□□□ -0.21
PDE6C-201ENST00000371447 SLC26A6Q9BXS9 759 aa13.73□□□□□ -0.21
PDE6C-201ENST00000371447 UBAP1LF5GYI3 381 aa13.72□□□□□ -0.21
PDE6C-201ENST00000371447 KIAA2012Q0VF49 1180 aa13.72□□□□□ -0.21
PDE6C-201ENST00000371447 SPECC1Q5M775 1068 aa13.72□□□□□ -0.21
PDE6C-201ENST00000371447 MB21D2Q8IYB1 491 aaPredicted RBP13.72□□□□□ -0.21
PDE6C-201ENST00000371447 CBX8Q9HC52 389 aa13.72□□□□□ -0.21
PDE6C-201ENST00000371447 KINO60870 393 aaKnown RBP13.72□□□□□ -0.21
PDE6C-201ENST00000371447 TTF1Q15361 905 aaPredicted RBP13.72□□□□□ -0.21
PDE6C-201ENST00000371447 SMARCC2Q8TAQ2 1214 aa13.72□□□□□ -0.21
PDE6C-201ENST00000371447 ALG1Q9BT22 464 aa13.72□□□□□ -0.21
PDE6C-201ENST00000371447 XIRP1Q702N8 1843 aaKnown RBP13.72□□□□□ -0.21
PDE6C-201ENST00000371447 GNPATO15228 680 aa13.72□□□□□ -0.21
PDE6C-201ENST00000371447 KLRK1P26718 216 aa13.72□□□□□ -0.21
PDE6C-201ENST00000371447 PAXIP1Q6ZW49 1069 aaPredicted RBP13.72□□□□□ -0.21
PDE6C-201ENST00000371447 IFNL3Q8IZI9 196 aa13.72□□□□□ -0.21
PDE6C-201ENST00000371447 STRBPQ96SI9 672 aaKnown RBP13.72□□□□□ -0.21
PDE6C-201ENST00000371447 ZSCAN16Q9H4T2 348 aaPredicted RBP13.72□□□□□ -0.21
PDE6C-201ENST00000371447 HPS5Q9UPZ3 1129 aa13.72□□□□□ -0.21
PDE6C-201ENST00000371447 CDHR2Q9BYE9 1310 aa13.72□□□□□ -0.21
PDE6C-201ENST00000371447 GOLGA8AA7E2F4 631 aa13.71□□□□□ -0.21
PDE6C-201ENST00000371447 ERVV-1B6SEH8 477 aa13.71□□□□□ -0.21
PDE6C-201ENST00000371447 CDC27P30260 824 aa13.71□□□□□ -0.21
PDE6C-201ENST00000371447 CELF1Q92879 486 aaKnown RBP13.71□□□□□ -0.21
PDE6C-201ENST00000371447 ZSWIM5Q9P217 1185 aa13.71□□□□□ -0.21
PDE6C-201ENST00000371447 NRBP1Q9UHY1 535 aa13.71□□□□□ -0.21
PDE6C-201ENST00000371447 PKD1L3Q7Z443 1732 aa13.71□□□□□ -0.21
PDE6C-201ENST00000371447 KIF28PB7ZC32 967 aa13.71□□□□□ -0.21
PDE6C-201ENST00000371447 UQCRFS1P1P0C7P4 283 aa13.71□□□□□ -0.21
PDE6C-201ENST00000371447 ZRSR1Q15695 479 aaKnown RBP13.71□□□□□ -0.21
PDE6C-201ENST00000371447 LINC00116Q8NCU8 138 aa13.71□□□□□ -0.21
PDE6C-201ENST00000371447 TSC1Q92574 1164 aa13.71□□□□□ -0.21
PDE6C-201ENST00000371447 ZNF274Q96GC6 653 aaPredicted RBP13.71□□□□□ -0.21
PDE6C-201ENST00000371447 EPB41L4AQ9HCS5 686 aaPredicted RBP13.71□□□□□ -0.21
PDE6C-201ENST00000371447 ANGEL1Q9UNK9 670 aaKnown RBP13.71□□□□□ -0.21
PDE6C-201ENST00000371447 JCADQ9P266 1359 aa13.71□□□□□ -0.22
PDE6C-201ENST00000371447 BECN2A8MW95 431 aa13.7□□□□□ -0.22
PDE6C-201ENST00000371447 DYNLL1P63167 89 aaKnown RBP13.7□□□□□ -0.22
PDE6C-201ENST00000371447 ILDR1Q86SU0 546 aaPredicted RBP13.7□□□□□ -0.22
PDE6C-201ENST00000371447 ANKRD18AQ8IVF6 992 aa13.7□□□□□ -0.22
PDE6C-201ENST00000371447 ZNF396Q96N95 335 aaPredicted RBP13.7□□□□□ -0.22
PDE6C-201ENST00000371447 ALDH8A1Q9H2A2 487 aaPredicted RBP13.7□□□□□ -0.22
PDE6C-201ENST00000371447 STRCQ7RTU9 1775 aa13.7□□□□□ -0.22
PDE6C-201ENST00000371447 CCDC69A6NI79 296 aa13.7□□□□□ -0.22
PDE6C-201ENST00000371447 EVX2Q03828 476 aa13.7□□□□□ -0.22
PDE6C-201ENST00000371447 GPR101Q96P66 508 aaPredicted RBP13.7□□□□□ -0.22
PDE6C-201ENST00000371447 LLPHQ9BRT6 129 aaKnown RBP13.7□□□□□ -0.22
PDE6C-201ENST00000371447 PCDHA7Q9UN72 937 aa13.7□□□□□ -0.22
PDE6C-201ENST00000371447 KCNJ14Q9UNX9 436 aa13.7□□□□□ -0.22
PDE6C-201ENST00000371447 SLC12A7Q9Y666 1083 aa13.7□□□□□ -0.22
PDE6C-201ENST00000371447 ZBTB43O43298 467 aa13.7□□□□□ -0.22
PDE6C-201ENST00000371447 DHX16O60231 1041 aaKnown RBP13.7□□□□□ -0.22
PDE6C-201ENST00000371447 RANBP6O60518 1105 aaKnown RBP13.7□□□□□ -0.22
PDE6C-201ENST00000371447 PTGS1P23219 599 aa13.7□□□□□ -0.22
PDE6C-201ENST00000371447 TBC1D9BQ66K14 1250 aa13.7□□□□□ -0.22
PDE6C-201ENST00000371447 MFSD6Q6ZSS7 791 aa13.7□□□□□ -0.22
PDE6C-201ENST00000371447 ADGRA1Q86SQ6 560 aa13.7□□□□□ -0.22
PDE6C-201ENST00000371447 FAM200AQ8TCP9 573 aa13.7□□□□□ -0.22
PDE6C-201ENST00000371447 CLSTN2Q9H4D0 955 aa13.7□□□□□ -0.22
PDE6C-201ENST00000371447 MROH5Q6ZUA9 1318 aa13.7□□□□□ -0.22
PDE6C-201ENST00000371447 GOLGA6L19H0YKK7 550 aa13.69□□□□□ -0.22
PDE6C-201ENST00000371447 HSP90AA4PQ58FG1 418 aa13.69□□□□□ -0.22
PDE6C-201ENST00000371447 C11orf57Q6ZUT1 292 aaPredicted RBP13.69□□□□□ -0.22
PDE6C-201ENST00000371447 NBPF5PQ86XG9 351 aaPredicted RBP13.69□□□□□ -0.22
PDE6C-201ENST00000371447 FUCA2Q9BTY2 467 aa13.69□□□□□ -0.22
PDE6C-201ENST00000371447 GLI3P10071 1580 aa13.69□□□□□ -0.22
PDE6C-201ENST00000371447 LRMPQ12912 555 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms