RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 NPR1P16066 1061 aa20.82■□□□□ 0.92
SSBP3-203ENST00000371319 MCM4P33991 863 aa20.82■□□□□ 0.92
SSBP3-203ENST00000371319 HAND2P61296 217 aa20.82■□□□□ 0.92
SSBP3-203ENST00000371319 Q6ZUG5 572 aa20.82■□□□□ 0.92
SSBP3-203ENST00000371319 TDRD7Q8NHU6 1098 aaKnown RBP20.82■□□□□ 0.92
SSBP3-203ENST00000371319 ZNF384Q8TF68 577 aa20.82■□□□□ 0.92
SSBP3-203ENST00000371319 GPR101Q96P66 508 aaPredicted RBP20.82■□□□□ 0.92
SSBP3-203ENST00000371319 NBPF3Q9H094 633 aa20.82■□□□□ 0.92
SSBP3-203ENST00000371319 EPB41L4AQ9HCS5 686 aaPredicted RBP20.82■□□□□ 0.92
SSBP3-203ENST00000371319 GGA1Q9UJY5 639 aa20.82■□□□□ 0.92
SSBP3-203ENST00000371319 NSFL1CQ9UNZ2 370 aaKnown RBP20.82■□□□□ 0.92
SSBP3-203ENST00000371319 ZDHHC9Q9Y397 364 aa20.82■□□□□ 0.92
SSBP3-203ENST00000371319 CCDC88AQ3V6T2 1871 aa20.82■□□□□ 0.92
SSBP3-203ENST00000371319 UFL1O94874 794 aa20.81■□□□□ 0.92
SSBP3-203ENST00000371319 PDE6BP35913 854 aa20.81■□□□□ 0.92
SSBP3-203ENST00000371319 CHAF1AQ13111 956 aaPredicted RBP20.81■□□□□ 0.92
SSBP3-203ENST00000371319 CCDC83Q8IWF9 413 aa20.81■□□□□ 0.92
SSBP3-203ENST00000371319 SP8Q8IXZ3 490 aa20.81■□□□□ 0.92
SSBP3-203ENST00000371319 TIAM2Q8IVF5 1701 aa20.81■□□□□ 0.92
SSBP3-203ENST00000371319 ZNF213O14771 459 aa20.8■□□□□ 0.92
SSBP3-203ENST00000371319 CLEC17AQ6ZS10 378 aa20.8■□□□□ 0.92
SSBP3-203ENST00000371319 MIGA1Q8NAN2 632 aa20.8■□□□□ 0.92
SSBP3-203ENST00000371319 GSG1L2A8MUP6 293 aa20.8■□□□□ 0.92
SSBP3-203ENST00000371319 PRKAB2O43741 272 aa20.8■□□□□ 0.92
SSBP3-203ENST00000371319 APPP05067 770 aa20.8■□□□□ 0.92
SSBP3-203ENST00000371319 GNAT2P19087 354 aa20.8■□□□□ 0.92
SSBP3-203ENST00000371319 ZNF804AQ7Z570 1209 aa20.8■□□□□ 0.92
SSBP3-203ENST00000371319 IFNL3Q8IZI9 196 aa20.8■□□□□ 0.92
SSBP3-203ENST00000371319 TBC1D16Q8TBP0 767 aa20.8■□□□□ 0.92
SSBP3-203ENST00000371319 NSUN4Q96CB9 384 aaKnown RBP20.8■□□□□ 0.92
SSBP3-203ENST00000371319 AGXT2Q9BYV1 514 aa20.8■□□□□ 0.92
SSBP3-203ENST00000371319 POLLQ9UGP5 575 aa20.8■□□□□ 0.92
SSBP3-203ENST00000371319 ATP6V0A2Q9Y487 856 aa20.8■□□□□ 0.92
SSBP3-203ENST00000371319 SALL1Q9NSC2 1324 aa20.79■□□□□ 0.92
SSBP3-203ENST00000371319 BAG6P46379 1132 aa20.79■□□□□ 0.92
SSBP3-203ENST00000371319 DEFB132Q7Z7B7 95 aa20.79■□□□□ 0.92
SSBP3-203ENST00000371319 NECAB1Q8N987 351 aa20.79■□□□□ 0.92
SSBP3-203ENST00000371319 RIOK1Q9BRS2 568 aaKnown RBP20.79■□□□□ 0.92
SSBP3-203ENST00000371319 LRRC2Q9BYS8 371 aa20.79■□□□□ 0.92
SSBP3-203ENST00000371319 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.79■□□□□ 0.92
SSBP3-203ENST00000371319 CHD4Q14839 1912 aa20.79■□□□□ 0.92
SSBP3-203ENST00000371319 MAGEB6P1A0A0J9YX57 407 aa20.78■□□□□ 0.92
SSBP3-203ENST00000371319 SF3B2Q13435 895 aaKnown RBP20.78■□□□□ 0.92
SSBP3-203ENST00000371319 NAA16Q6N069 864 aaPredicted RBP20.78■□□□□ 0.92
SSBP3-203ENST00000371319 TBC1D10CQ8IV04 446 aa20.78■□□□□ 0.92
SSBP3-203ENST00000371319 MB21D2Q8IYB1 491 aaPredicted RBP20.78■□□□□ 0.92
SSBP3-203ENST00000371319 MASTLQ96GX5 879 aa20.78■□□□□ 0.92
SSBP3-203ENST00000371319 DUOX1Q9NRD9 1551 aa20.78■□□□□ 0.92
SSBP3-203ENST00000371319 SLC4A4Q9Y6R1 1079 aa20.78■□□□□ 0.92
SSBP3-203ENST00000371319 BRD1O95696 1058 aa20.77■□□□□ 0.92
SSBP3-203ENST00000371319 MECOMQ03112 1051 aa20.77■□□□□ 0.92
SSBP3-203ENST00000371319 IL1R1P14778 569 aa20.76■□□□□ 0.91
SSBP3-203ENST00000371319 PRDX5P30044 214 aa20.76■□□□□ 0.91
SSBP3-203ENST00000371319 ALDH1B1P30837 517 aa20.76■□□□□ 0.91
SSBP3-203ENST00000371319 BRF1Q92994 677 aa20.76■□□□□ 0.91
SSBP3-203ENST00000371319 GBP4Q96PP9 640 aa20.76■□□□□ 0.91
SSBP3-203ENST00000371319 NAPBQ9H115 298 aa20.76■□□□□ 0.91
SSBP3-203ENST00000371319 CD209Q9NNX6 404 aa20.76■□□□□ 0.91
SSBP3-203ENST00000371319 SMC3Q9UQE7 1217 aa20.76■□□□□ 0.91
SSBP3-203ENST00000371319 JAG2Q9Y219 1238 aa20.76■□□□□ 0.91
SSBP3-203ENST00000371319 DYNLL1P63167 89 aaKnown RBP20.76■□□□□ 0.91
SSBP3-203ENST00000371319 FBXL16Q8N461 479 aa20.76■□□□□ 0.91
SSBP3-203ENST00000371319 NCOA7Q8NI08 942 aa20.76■□□□□ 0.91
SSBP3-203ENST00000371319 WDR66Q8TBY9 1149 aa20.76■□□□□ 0.91
SSBP3-203ENST00000371319 ANTXR2P58335 489 aa20.75■□□□□ 0.91
SSBP3-203ENST00000371319 SPTY2D1Q68D10 685 aaPredicted RBP20.75■□□□□ 0.91
SSBP3-203ENST00000371319 TMED8Q6PL24 325 aaPredicted RBP20.75■□□□□ 0.91
SSBP3-203ENST00000371319 CHST3Q7LGC8 479 aa20.75■□□□□ 0.91
SSBP3-203ENST00000371319 C2CD5Q86YS7 1000 aa20.75■□□□□ 0.91
SSBP3-203ENST00000371319 WDR19Q8NEZ3 1342 aa20.74■□□□□ 0.91
SSBP3-203ENST00000371319 IGSF3O75054 1194 aa20.74■□□□□ 0.91
SSBP3-203ENST00000371319 BAG4O95429 457 aaKnown RBP20.74■□□□□ 0.91
SSBP3-203ENST00000371319 NKX2-3Q8TAU0 364 aa20.74■□□□□ 0.91
SSBP3-203ENST00000371319 GTF3C6Q969F1 213 aa20.74■□□□□ 0.91
SSBP3-203ENST00000371319 NACAP1Q9BZK3 213 aa20.74■□□□□ 0.91
SSBP3-203ENST00000371319 TACC3Q9Y6A5 838 aa20.74■□□□□ 0.91
SSBP3-203ENST00000371319 PRC1O43663 620 aa20.73■□□□□ 0.91
SSBP3-203ENST00000371319 GJB2P29033 226 aa20.73■□□□□ 0.91
SSBP3-203ENST00000371319 APOBRQ0VD83 1088 aa20.73■□□□□ 0.91
SSBP3-203ENST00000371319 STK3Q13188 491 aa20.73■□□□□ 0.91
SSBP3-203ENST00000371319 STYK1Q6J9G0 422 aa20.73■□□□□ 0.91
SSBP3-203ENST00000371319 OLFM4Q6UX06 510 aa20.73■□□□□ 0.91
SSBP3-203ENST00000371319 DDX11L8A8MPP1 907 aa20.72■□□□□ 0.91
SSBP3-203ENST00000371319 C6orf229H3BNL8 230 aa20.72■□□□□ 0.91
SSBP3-203ENST00000371319 PFKFB2O60825 505 aa20.72■□□□□ 0.91
SSBP3-203ENST00000371319 MCM5P33992 734 aa20.72■□□□□ 0.91
SSBP3-203ENST00000371319 FGD1P98174 961 aa20.72■□□□□ 0.91
SSBP3-203ENST00000371319 RALYLQ86SE5 291 aaKnown RBP20.72■□□□□ 0.91
SSBP3-203ENST00000371319 PDGFDQ9GZP0 370 aaPredicted RBP20.72■□□□□ 0.91
SSBP3-203ENST00000371319 NEDD4P46934 1319 aa20.72■□□□□ 0.91
SSBP3-203ENST00000371319 SLX4Q8IY92 1834 aa20.72■□□□□ 0.91
SSBP3-203ENST00000371319 DTNBO60941 627 aa20.72■□□□□ 0.91
SSBP3-203ENST00000371319 TDO2P48775 406 aa20.72■□□□□ 0.91
SSBP3-203ENST00000371319 EVCP57679 992 aa20.72■□□□□ 0.91
SSBP3-203ENST00000371319 CTDSPL2Q05D32 466 aa20.72■□□□□ 0.91
SSBP3-203ENST00000371319 GRIK5Q16478 980 aa20.72■□□□□ 0.91
SSBP3-203ENST00000371319 SDR42E1Q8WUS8 393 aa20.72■□□□□ 0.91
SSBP3-203ENST00000371319 ZNF622Q969S3 477 aaKnown RBP eCLIP20.72■□□□□ 0.91
SSBP3-203ENST00000371319 GPHNQ9NQX3 736 aaPredicted RBP20.72■□□□□ 0.91
SSBP3-203ENST00000371319 LDHBP07195 334 aaKnown RBP20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms