RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.41□□□□□ -1.06
USP1-202ENST00000371146 UPF2Q9HAU5 1272 aaKnown RBP8.41□□□□□ -1.06
USP1-202ENST00000371146 PPP4R2Q9NY27 417 aa8.41□□□□□ -1.06
USP1-202ENST00000371146 SHPRHQ149N8 1683 aa8.41□□□□□ -1.06
USP1-202ENST00000371146 TRPM3Q9HCF6 1732 aaPredicted RBP8.41□□□□□ -1.06
USP1-202ENST00000371146 PPP1R12BO60237 982 aaPredicted RBP8.41□□□□□ -1.06
USP1-202ENST00000371146 BAG3O95817 575 aa8.41□□□□□ -1.06
USP1-202ENST00000371146 RASGRF1Q13972 1273 aa8.41□□□□□ -1.06
USP1-202ENST00000371146 NFXL1Q6ZNB6 911 aa8.41□□□□□ -1.06
USP1-202ENST00000371146 SPICE1Q8N0Z3 855 aa8.41□□□□□ -1.06
USP1-202ENST00000371146 TRPM4Q8TD43 1214 aa8.41□□□□□ -1.06
USP1-202ENST00000371146 NUP133Q8WUM0 1156 aa8.41□□□□□ -1.06
USP1-202ENST00000371146 ZKSCAN3Q9BRR0 538 aa8.41□□□□□ -1.06
USP1-202ENST00000371146 SLC4A4Q9Y6R1 1079 aa8.41□□□□□ -1.06
USP1-202ENST00000371146 SF3B3Q15393 1217 aaKnown RBP8.41□□□□□ -1.06
USP1-202ENST00000371146 FOXD4L5Q5VV16 416 aaPredicted RBP8.41□□□□□ -1.06
USP1-202ENST00000371146 FOXD4L4Q8WXT5 416 aaPredicted RBP8.41□□□□□ -1.06
USP1-202ENST00000371146 TMEM39BQ9GZU3 492 aa8.41□□□□□ -1.06
USP1-202ENST00000371146 NAPBQ9H115 298 aa8.41□□□□□ -1.06
USP1-202ENST00000371146 MYOM1P52179 1685 aa8.41□□□□□ -1.06
USP1-202ENST00000371146 MON2Q7Z3U7 1717 aa8.4□□□□□ -1.06
USP1-202ENST00000371146 CLGNO14967 610 aa8.4□□□□□ -1.06
USP1-202ENST00000371146 MBD4O95243 580 aa8.4□□□□□ -1.06
USP1-202ENST00000371146 PTMAP06454 111 aaKnown RBP8.4□□□□□ -1.06
USP1-202ENST00000371146 BTDP43251 543 aa8.4□□□□□ -1.06
USP1-202ENST00000371146 CCDC144CPQ8IYA2 1237 aa8.4□□□□□ -1.06
USP1-202ENST00000371146 OTUD5Q96G74 571 aa8.4□□□□□ -1.06
USP1-202ENST00000371146 KAZALD1Q96I82 304 aa8.4□□□□□ -1.06
USP1-202ENST00000371146 PRMT6Q96LA8 375 aaPredicted RBP8.4□□□□□ -1.06
USP1-202ENST00000371146 CSRNP1Q96S65 589 aa8.4□□□□□ -1.06
USP1-202ENST00000371146 PAGR1Q9BTK6 254 aa8.4□□□□□ -1.06
USP1-202ENST00000371146 ECHDC1Q9NTX5 307 aa8.4□□□□□ -1.06
USP1-202ENST00000371146 DBNLQ9UJU6 430 aaKnown RBP8.4□□□□□ -1.06
USP1-202ENST00000371146 LEMD3Q9Y2U8 911 aa8.4□□□□□ -1.06
USP1-202ENST00000371146 RASA3Q14644 834 aa8.4□□□□□ -1.06
USP1-202ENST00000371146 GRIK5Q16478 980 aa8.4□□□□□ -1.06
USP1-202ENST00000371146 CC2D2BQ6DHV5 1058 aa8.4□□□□□ -1.06
USP1-202ENST00000371146 CHD1LQ86WJ1 897 aa8.4□□□□□ -1.06
USP1-202ENST00000371146 LRRC2Q9BYS8 371 aa8.4□□□□□ -1.06
USP1-202ENST00000371146 ZBTB40Q9NUA8 1239 aa8.4□□□□□ -1.06
USP1-202ENST00000371146 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.4□□□□□ -1.06
USP1-202ENST00000371146 COL3A1P02461 1466 aaPredicted RBP8.4□□□□□ -1.07
USP1-202ENST00000371146 LDHCP07864 332 aa8.4□□□□□ -1.07
USP1-202ENST00000371146 SLC10A4Q96EP9 437 aa8.4□□□□□ -1.07
USP1-202ENST00000371146 ZNF521Q96K83 1311 aa8.4□□□□□ -1.07
USP1-202ENST00000371146 MROH5Q6ZUA9 1318 aa8.39□□□□□ -1.07
USP1-202ENST00000371146 PRKAB2O43741 272 aa8.39□□□□□ -1.07
USP1-202ENST00000371146 KCNA3P22001 575 aa8.39□□□□□ -1.07
USP1-202ENST00000371146 CYP4F22Q6NT55 531 aa8.39□□□□□ -1.07
USP1-202ENST00000371146 GADL1Q6ZQY3 521 aa8.39□□□□□ -1.07
USP1-202ENST00000371146 PODNQ7Z5L7 613 aa8.39□□□□□ -1.07
USP1-202ENST00000371146 ARHGAP45Q92619 1136 aa8.39□□□□□ -1.07
USP1-202ENST00000371146 TMEM51Q9NW97 253 aa8.39□□□□□ -1.07
USP1-202ENST00000371146 PAG1Q9NWQ8 432 aa8.39□□□□□ -1.07
USP1-202ENST00000371146 GLTPD2A6NH11 291 aa8.39□□□□□ -1.07
USP1-202ENST00000371146 TRPA1O75762 1119 aa8.39□□□□□ -1.07
USP1-202ENST00000371146 MCCP23508 829 aa8.39□□□□□ -1.07
USP1-202ENST00000371146 CPXCR1Q8N123 301 aa8.39□□□□□ -1.07
USP1-202ENST00000371146 C2orf69Q8N8R5 385 aa8.39□□□□□ -1.07
USP1-202ENST00000371146 SMCR8Q8TEV9 937 aaPredicted RBP8.39□□□□□ -1.07
USP1-202ENST00000371146 ZNF830Q96NB3 372 aaPredicted RBP8.39□□□□□ -1.07
USP1-202ENST00000371146 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.39□□□□□ -1.07
USP1-202ENST00000371146 DENND2AQ9ULE3 1009 aa8.39□□□□□ -1.07
USP1-202ENST00000371146 CSADQ9Y600 493 aa8.39□□□□□ -1.07
USP1-202ENST00000371146 CRKP46108 304 aa8.38□□□□□ -1.07
USP1-202ENST00000371146 KIAA2012Q0VF49 1180 aa8.38□□□□□ -1.07
USP1-202ENST00000371146 TRDNQ13061 729 aa8.38□□□□□ -1.07
USP1-202ENST00000371146 TRIM28Q13263 835 aaKnown RBP8.38□□□□□ -1.07
USP1-202ENST00000371146 UBE4AQ14139 1066 aa8.38□□□□□ -1.07
USP1-202ENST00000371146 WDR66Q8TBY9 1149 aa8.38□□□□□ -1.07
USP1-202ENST00000371146 COA1Q9GZY4 146 aa8.38□□□□□ -1.07
USP1-202ENST00000371146 ELP3Q9H9T3 547 aa8.38□□□□□ -1.07
USP1-202ENST00000371146 HMG20BQ9P0W2 317 aa8.38□□□□□ -1.07
USP1-202ENST00000371146 AKAP12Q02952 1782 aa8.38□□□□□ -1.07
USP1-202ENST00000371146 SPTY2D1Q68D10 685 aaPredicted RBP8.38□□□□□ -1.07
USP1-202ENST00000371146 ZNF444Q8N0Y2 327 aaPredicted RBP8.38□□□□□ -1.07
USP1-202ENST00000371146 WRNIP1Q96S55 665 aa8.38□□□□□ -1.07
USP1-202ENST00000371146 MYOZ2Q9NPC6 264 aa8.38□□□□□ -1.07
USP1-202ENST00000371146 BRWD3Q6RI45 1802 aa8.38□□□□□ -1.07
USP1-202ENST00000371146 MAGEB6P1A0A0J9YX57 407 aa8.38□□□□□ -1.07
USP1-202ENST00000371146 ATP2B1P20020 1258 aa8.38□□□□□ -1.07
USP1-202ENST00000371146 TNNI2P48788 182 aa8.38□□□□□ -1.07
USP1-202ENST00000371146 STK3Q13188 491 aa8.38□□□□□ -1.07
USP1-202ENST00000371146 RALYLQ86SE5 291 aaKnown RBP8.38□□□□□ -1.07
USP1-202ENST00000371146 UIMC1Q96RL1 719 aa8.38□□□□□ -1.07
USP1-202ENST00000371146 DEFB129Q9H1M3 183 aa8.38□□□□□ -1.07
USP1-202ENST00000371146 ZNF532Q9HCE3 1301 aa8.37□□□□□ -1.07
USP1-202ENST00000371146 KCPQ6ZWJ8 1503 aa8.37□□□□□ -1.07
USP1-202ENST00000371146 YDJCA8MPS7 323 aa8.37□□□□□ -1.07
USP1-202ENST00000371146 UQCRFS1P1P0C7P4 283 aa8.37□□□□□ -1.07
USP1-202ENST00000371146 CCDC96Q2M329 555 aa8.37□□□□□ -1.07
USP1-202ENST00000371146 ZKSCAN4Q969J2 545 aaPredicted RBP8.37□□□□□ -1.07
USP1-202ENST00000371146 PICK1Q9NRD5 415 aa8.37□□□□□ -1.07
USP1-202ENST00000371146 HOMER2Q9NSB8 354 aa8.37□□□□□ -1.07
USP1-202ENST00000371146 ABCC6O95255 1503 aa8.37□□□□□ -1.07
USP1-202ENST00000371146 HLA-DOAP06340 250 aa8.37□□□□□ -1.07
USP1-202ENST00000371146 NBPF12Q5TAG4 269 aaPredicted RBP8.37□□□□□ -1.07
USP1-202ENST00000371146 CLEC10AQ8IUN9 316 aa8.37□□□□□ -1.07
USP1-202ENST00000371146 ANP32BQ92688 251 aaKnown RBP8.37□□□□□ -1.07
USP1-202ENST00000371146 PRDM10Q9NQV6 1147 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms