RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 PLCH2O75038 1416 aa24.98■■□□□ 1.59
TM9SF3-201ENST00000371142 RIMS2Q9UQ26 1411 aa24.98■■□□□ 1.59
TM9SF3-201ENST00000371142 DNAJC21Q5F1R6 531 aaKnown RBP24.98■■□□□ 1.59
TM9SF3-201ENST00000371142 CTNND2Q9UQB3 1225 aa24.98■■□□□ 1.59
TM9SF3-201ENST00000371142 MSL1Q68DK7 614 aa24.97■■□□□ 1.59
TM9SF3-201ENST00000371142 RAB3IL1Q8TBN0 382 aa24.97■■□□□ 1.59
TM9SF3-201ENST00000371142 RBM28Q9NW13 759 aaKnown RBP24.97■■□□□ 1.59
TM9SF3-201ENST00000371142 WDR7Q9Y4E6 1490 aa24.97■■□□□ 1.59
TM9SF3-201ENST00000371142 LETM2Q2VYF4 491 aa24.97■■□□□ 1.59
TM9SF3-201ENST00000371142 UBAP1LF5GYI3 381 aa24.97■■□□□ 1.59
TM9SF3-201ENST00000371142 ZBTB16Q05516 673 aa24.97■■□□□ 1.59
TM9SF3-201ENST00000371142 PLCD3Q8N3E9 789 aa24.97■■□□□ 1.59
TM9SF3-201ENST00000371142 ANKRD2Q9GZV1 360 aa24.97■■□□□ 1.59
TM9SF3-201ENST00000371142 BACH1O14867 736 aa24.97■■□□□ 1.59
TM9SF3-201ENST00000371142 CCT6AP40227 531 aaKnown RBP24.97■■□□□ 1.59
TM9SF3-201ENST00000371142 NDC80O14777 642 aa24.97■■□□□ 1.59
TM9SF3-201ENST00000371142 IQUBQ8NA54 791 aa24.97■■□□□ 1.59
TM9SF3-201ENST00000371142 SOS1Q07889 1333 aaPredicted RBP24.96■■□□□ 1.59
TM9SF3-201ENST00000371142 PHACTR3Q96KR7 559 aa24.96■■□□□ 1.59
TM9SF3-201ENST00000371142 CCDC114Q96M63 670 aa24.96■■□□□ 1.59
TM9SF3-201ENST00000371142 PPP1R7Q15435 360 aa24.96■■□□□ 1.59
TM9SF3-201ENST00000371142 LUC7L2Q9Y383 392 aaKnown RBP24.96■■□□□ 1.59
TM9SF3-201ENST00000371142 VPS18Q9P253 973 aa24.96■■□□□ 1.59
TM9SF3-201ENST00000371142 UHRF1BP1LA0JNW5 1464 aa24.96■■□□□ 1.59
TM9SF3-201ENST00000371142 TLDC2A0PJX2 215 aa24.95■■□□□ 1.59
TM9SF3-201ENST00000371142 GPCPD1Q9NPB8 672 aa24.95■■□□□ 1.59
TM9SF3-201ENST00000371142 TIGD1Q96MW7 591 aa24.95■■□□□ 1.58
TM9SF3-201ENST00000371142 EYA1Q99502 592 aa24.95■■□□□ 1.58
TM9SF3-201ENST00000371142 B4DLN1 442 aa24.95■■□□□ 1.58
TM9SF3-201ENST00000371142 MRPL12P52815 198 aaKnown RBP24.95■■□□□ 1.58
TM9SF3-201ENST00000371142 DDX23Q9BUQ8 820 aaKnown RBP24.95■■□□□ 1.58
TM9SF3-201ENST00000371142 CEP83Q9Y592 693 aa24.95■■□□□ 1.58
TM9SF3-201ENST00000371142 RNMTO43148 476 aaKnown RBP24.94■■□□□ 1.58
TM9SF3-201ENST00000371142 ANKS4BQ8N8V4 417 aa24.94■■□□□ 1.58
TM9SF3-201ENST00000371142 SPATA24Q86W54 205 aa24.94■■□□□ 1.58
TM9SF3-201ENST00000371142 B4E1Z4 1266 aa24.94■■□□□ 1.58
TM9SF3-201ENST00000371142 CAPN2P17655 700 aa24.94■■□□□ 1.58
TM9SF3-201ENST00000371142 TRAF3IP1Q8TDR0 691 aaPredicted RBP24.94■■□□□ 1.58
TM9SF3-201ENST00000371142 USP26Q9BXU7 913 aa24.94■■□□□ 1.58
TM9SF3-201ENST00000371142 IVLP07476 585 aa24.94■■□□□ 1.58
TM9SF3-201ENST00000371142 SV2BQ7L1I2 683 aa24.94■■□□□ 1.58
TM9SF3-201ENST00000371142 ZBTB40Q9NUA8 1239 aa24.94■■□□□ 1.58
TM9SF3-201ENST00000371142 HELLSQ9NRZ9 838 aa24.93■■□□□ 1.58
TM9SF3-201ENST00000371142 CLCN1P35523 988 aa24.93■■□□□ 1.58
TM9SF3-201ENST00000371142 DCAF5Q96JK2 942 aa24.93■■□□□ 1.58
TM9SF3-201ENST00000371142 KCNK9Q9NPC2 374 aa24.93■■□□□ 1.58
TM9SF3-201ENST00000371142 ZEB2O60315 1214 aa24.93■■□□□ 1.58
TM9SF3-201ENST00000371142 KRT5P13647 590 aa24.93■■□□□ 1.58
TM9SF3-201ENST00000371142 SMC5Q8IY18 1101 aa24.93■■□□□ 1.58
TM9SF3-201ENST00000371142 POLR3AO14802 1390 aaPredicted RBP24.93■■□□□ 1.58
TM9SF3-201ENST00000371142 LAMC3Q9Y6N6 1575 aa24.93■■□□□ 1.58
TM9SF3-201ENST00000371142 HARSP12081 509 aaKnown RBP24.93■■□□□ 1.58
TM9SF3-201ENST00000371142 URB2Q14146 1524 aaKnown RBP24.93■■□□□ 1.58
TM9SF3-201ENST00000371142 JDP2Q8WYK2 163 aa24.93■■□□□ 1.58
TM9SF3-201ENST00000371142 RAD50Q92878 1312 aa24.92■■□□□ 1.58
TM9SF3-201ENST00000371142 ABCC1P33527 1531 aa24.92■■□□□ 1.58
TM9SF3-201ENST00000371142 PSMC4P43686 418 aa24.92■■□□□ 1.58
TM9SF3-201ENST00000371142 ELP1O95163 1332 aa24.92■■□□□ 1.58
TM9SF3-201ENST00000371142 CHMP2AO43633 222 aa24.92■■□□□ 1.58
TM9SF3-201ENST00000371142 SMC6Q96SB8 1091 aa24.92■■□□□ 1.58
TM9SF3-201ENST00000371142 TTC14Q96N46 770 aa24.92■■□□□ 1.58
TM9SF3-201ENST00000371142 GPATCH8Q9UKJ3 1502 aaKnown RBP24.92■■□□□ 1.58
TM9SF3-201ENST00000371142 EIF6P56537 245 aaKnown RBP24.92■■□□□ 1.58
TM9SF3-201ENST00000371142 CCDC65Q8IXS2 484 aa24.92■■□□□ 1.58
TM9SF3-201ENST00000371142 MSANTD4Q8NCY6 345 aa24.91■■□□□ 1.58
TM9SF3-201ENST00000371142 FAM89AQ96GI7 184 aa24.91■■□□□ 1.58
TM9SF3-201ENST00000371142 TRAF5O00463 557 aa24.91■■□□□ 1.58
TM9SF3-201ENST00000371142 TOM1O60784 492 aa24.91■■□□□ 1.58
TM9SF3-201ENST00000371142 TUBB4AP04350 444 aa24.91■■□□□ 1.58
TM9SF3-201ENST00000371142 CCDC121Q6ZUS5 278 aa24.91■■□□□ 1.58
TM9SF3-201ENST00000371142 ARMT1Q9H993 441 aa24.91■■□□□ 1.58
TM9SF3-201ENST00000371142 TIMM10P62072 90 aa24.91■■□□□ 1.58
TM9SF3-201ENST00000371142 EYA3Q99504 573 aa24.91■■□□□ 1.58
TM9SF3-201ENST00000371142 TXNDC16Q9P2K2 825 aa24.91■■□□□ 1.58
TM9SF3-201ENST00000371142 CCDC122Q5T0U0 273 aa24.91■■□□□ 1.58
TM9SF3-201ENST00000371142 TEX11Q8IYF3 940 aa24.91■■□□□ 1.58
TM9SF3-201ENST00000371142 FRMD4BQ9Y2L6 1034 aa24.91■■□□□ 1.58
TM9SF3-201ENST00000371142 DENND2AQ9ULE3 1009 aa24.9■■□□□ 1.58
TM9SF3-201ENST00000371142 RPS6KB1P23443 525 aa24.9■■□□□ 1.58
TM9SF3-201ENST00000371142 NOC4LQ9BVI4 516 aaKnown RBP24.9■■□□□ 1.58
TM9SF3-201ENST00000371142 NPATQ14207 1427 aa24.9■■□□□ 1.58
TM9SF3-201ENST00000371142 AKR1B15C9JRZ8 316 aaPredicted RBP24.9■■□□□ 1.58
TM9SF3-201ENST00000371142 SEC24BO95487 1268 aa24.9■■□□□ 1.58
TM9SF3-201ENST00000371142 HOXC9P31274 260 aa24.9■■□□□ 1.58
TM9SF3-201ENST00000371142 INTS4Q96HW7 963 aaKnown RBP24.9■■□□□ 1.58
TM9SF3-201ENST00000371142 BAG1Q99933 345 aaPredicted RBP24.9■■□□□ 1.58
TM9SF3-201ENST00000371142 MYL5Q02045 173 aa24.9■■□□□ 1.58
TM9SF3-201ENST00000371142 UBLCP1Q8WVY7 318 aaPredicted RBP24.9■■□□□ 1.58
TM9SF3-201ENST00000371142 RBM17Q96I25 401 aaKnown RBP24.9■■□□□ 1.58
TM9SF3-201ENST00000371142 PARD3Q8TEW0 1356 aa24.89■■□□□ 1.58
TM9SF3-201ENST00000371142 GNPATO15228 680 aa24.89■■□□□ 1.58
TM9SF3-201ENST00000371142 G2E3Q7L622 706 aa24.89■■□□□ 1.58
TM9SF3-201ENST00000371142 TSGA10Q9BZW7 698 aa24.89■■□□□ 1.58
TM9SF3-201ENST00000371142 RPL13P26373 211 aaKnown RBP24.89■■□□□ 1.58
TM9SF3-201ENST00000371142 MAK16Q9BXY0 300 aaKnown RBP24.89■■□□□ 1.58
TM9SF3-201ENST00000371142 PCDH11XQ9BZA7 1347 aa24.89■■□□□ 1.58
TM9SF3-201ENST00000371142 PCDH11YQ9BZA8 1340 aa24.89■■□□□ 1.58
TM9SF3-201ENST00000371142 A0A1B0GUL7 405 aa24.89■■□□□ 1.58
TM9SF3-201ENST00000371142 PIK3AP1Q6ZUJ8 805 aa24.89■■□□□ 1.58
TM9SF3-201ENST00000371142 MICALL1Q8N3F8 863 aa24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms