RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 TDRD7Q8NHU6 1098 aaKnown RBP14.3□□□□□ -0.12
GPC4-201ENST00000370828 PPANQ9NQ55 473 aaKnown RBP14.3□□□□□ -0.12
GPC4-201ENST00000370828 BICRAQ9NZM4 1560 aa14.3□□□□□ -0.12
GPC4-201ENST00000370828 LOC102724159A0A0B4J2E5 919 aa14.3□□□□□ -0.12
GPC4-201ENST00000370828 A6NNZ2 444 aa14.3□□□□□ -0.12
GPC4-201ENST00000370828 PWP2Q15269 919 aaKnown RBP14.3□□□□□ -0.12
GPC4-201ENST00000370828 IFI16Q16666 785 aaKnown RBP14.3□□□□□ -0.12
GPC4-201ENST00000370828 TUBB8Q3ZCM7 444 aa14.3□□□□□ -0.12
GPC4-201ENST00000370828 HINFPQ9BQA5 517 aa14.3□□□□□ -0.12
GPC4-201ENST00000370828 C14orf93Q9H972 538 aaKnown RBP14.3□□□□□ -0.12
GPC4-201ENST00000370828 VEZTQ9HBM0 779 aa14.3□□□□□ -0.12
GPC4-201ENST00000370828 TRIM75PA6NK02 468 aa14.3□□□□□ -0.12
GPC4-201ENST00000370828 CETN2P41208 172 aa14.3□□□□□ -0.12
GPC4-201ENST00000370828 ZKSCAN8Q15776 578 aaPredicted RBP14.3□□□□□ -0.12
GPC4-201ENST00000370828 FAM71BQ8TC56 605 aa14.3□□□□□ -0.12
GPC4-201ENST00000370828 NCAPGQ9BPX3 1015 aa14.3□□□□□ -0.12
GPC4-201ENST00000370828 KCNH3Q9ULD8 1083 aa14.3□□□□□ -0.12
GPC4-201ENST00000370828 PEG3Q9GZU2 1588 aa14.3□□□□□ -0.12
GPC4-201ENST00000370828 AMPD3Q01432 767 aa14.3□□□□□ -0.12
GPC4-201ENST00000370828 CYP26C1Q6V0L0 522 aa14.3□□□□□ -0.12
GPC4-201ENST00000370828 TRMT2AQ8IZ69 625 aaKnown RBP14.3□□□□□ -0.12
GPC4-201ENST00000370828 SEC62Q99442 399 aaKnown RBP14.3□□□□□ -0.12
GPC4-201ENST00000370828 POLKQ9UBT6 870 aa14.3□□□□□ -0.12
GPC4-201ENST00000370828 PSDA5PKW4 1024 aaPredicted RBP14.29□□□□□ -0.12
GPC4-201ENST00000370828 KRT13P13646 458 aa14.29□□□□□ -0.12
GPC4-201ENST00000370828 CAPS2Q9BXY5 557 aa14.29□□□□□ -0.12
GPC4-201ENST00000370828 KCNK9Q9NPC2 374 aa14.29□□□□□ -0.12
GPC4-201ENST00000370828 PNMA6EA0A0J9YXQ4 647 aa14.29□□□□□ -0.12
GPC4-201ENST00000370828 KRT9P35527 623 aa14.29□□□□□ -0.12
GPC4-201ENST00000370828 TNNC1P63316 161 aa14.29□□□□□ -0.12
GPC4-201ENST00000370828 WHAMMP3Q1A5X7 153 aa14.29□□□□□ -0.12
GPC4-201ENST00000370828 RABGGTAQ92696 567 aa14.29□□□□□ -0.12
GPC4-201ENST00000370828 ZRANB1Q9UGI0 708 aa14.29□□□□□ -0.12
GPC4-201ENST00000370828 LAMC3Q9Y6N6 1575 aa14.29□□□□□ -0.12
GPC4-201ENST00000370828 SPATA31E1Q6ZUB1 1445 aa14.29□□□□□ -0.12
GPC4-201ENST00000370828 MAP3K12Q12852 859 aa14.29□□□□□ -0.12
GPC4-201ENST00000370828 EFCAB13Q8IY85 973 aa14.29□□□□□ -0.12
GPC4-201ENST00000370828 TEX14Q8IWB6 1497 aa14.29□□□□□ -0.12
GPC4-201ENST00000370828 ZFYP08048 801 aaPredicted RBP14.29□□□□□ -0.12
GPC4-201ENST00000370828 KMT5BQ4FZB7 885 aa14.29□□□□□ -0.12
GPC4-201ENST00000370828 MFSD6Q6ZSS7 791 aa14.29□□□□□ -0.12
GPC4-201ENST00000370828 EXOC4Q96A65 974 aa14.29□□□□□ -0.12
GPC4-201ENST00000370828 JAKMIP2Q96AA8 810 aa14.29□□□□□ -0.12
GPC4-201ENST00000370828 CALML4Q96GE6 196 aa14.29□□□□□ -0.12
GPC4-201ENST00000370828 KIAA1468Q9P260 1216 aa14.29□□□□□ -0.12
GPC4-201ENST00000370828 ATP8B1O43520 1251 aa14.28□□□□□ -0.12
GPC4-201ENST00000370828 GPIHBP1Q8IV16 184 aa14.28□□□□□ -0.12
GPC4-201ENST00000370828 LMNTD2Q8IXW0 634 aa14.28□□□□□ -0.12
GPC4-201ENST00000370828 RNF41Q9H4P4 317 aaPredicted RBP14.28□□□□□ -0.12
GPC4-201ENST00000370828 ATP11AP98196 1134 aa14.28□□□□□ -0.12
GPC4-201ENST00000370828 RGS22Q8NE09 1264 aa14.28□□□□□ -0.12
GPC4-201ENST00000370828 SBNO2Q9Y2G9 1366 aa14.28□□□□□ -0.12
GPC4-201ENST00000370828 ERCC3P19447 782 aa14.28□□□□□ -0.12
GPC4-201ENST00000370828 GOLGA8FQ08AF8 430 aa14.28□□□□□ -0.12
GPC4-201ENST00000370828 GOLGA8DPQ0D2H9 430 aa14.28□□□□□ -0.12
GPC4-201ENST00000370828 ARID5BQ14865 1188 aa14.28□□□□□ -0.12
GPC4-201ENST00000370828 RTN1Q16799 776 aa14.28□□□□□ -0.12
GPC4-201ENST00000370828 HOOK3Q86VS8 718 aa14.28□□□□□ -0.12
GPC4-201ENST00000370828 WHAMMQ8TF30 809 aa14.28□□□□□ -0.12
GPC4-201ENST00000370828 JPH2Q9BR39 696 aaPredicted RBP14.28□□□□□ -0.12
GPC4-201ENST00000370828 CTNND2Q9UQB3 1225 aa14.28□□□□□ -0.12
GPC4-201ENST00000370828 MAPK8IP1Q9UQF2 711 aa14.28□□□□□ -0.12
GPC4-201ENST00000370828 RIPOR2Q9Y4F9 1068 aa14.28□□□□□ -0.12
GPC4-201ENST00000370828 ZBTB16Q05516 673 aa14.27□□□□□ -0.12
GPC4-201ENST00000370828 WTAPQ15007 396 aa14.27□□□□□ -0.12
GPC4-201ENST00000370828 WDR78Q5VTH9 848 aa14.27□□□□□ -0.12
GPC4-201ENST00000370828 TMTC1Q8IUR5 882 aa14.27□□□□□ -0.12
GPC4-201ENST00000370828 BICC1Q9H694 974 aaKnown RBP14.27□□□□□ -0.12
GPC4-201ENST00000370828 MED4Q9NPJ6 270 aa14.27□□□□□ -0.12
GPC4-201ENST00000370828 GEMIN8Q9NWZ8 242 aaKnown RBP14.27□□□□□ -0.12
GPC4-201ENST00000370828 A0A087WUV0 522 aaPredicted RBP14.27□□□□□ -0.12
GPC4-201ENST00000370828 MXRA7P84157 204 aa14.27□□□□□ -0.12
GPC4-201ENST00000370828 CCDC25Q86WR0 208 aa14.27□□□□□ -0.12
GPC4-201ENST00000370828 SAMM50Q9Y512 469 aa14.27□□□□□ -0.12
GPC4-201ENST00000370828 RPSAP08865 295 aaKnown RBP14.27□□□□□ -0.13
GPC4-201ENST00000370828 ASIC1P78348 528 aa14.27□□□□□ -0.13
GPC4-201ENST00000370828 TMEM266Q2M3C6 531 aa14.27□□□□□ -0.13
GPC4-201ENST00000370828 WWC2Q6AWC2 1192 aa14.27□□□□□ -0.13
GPC4-201ENST00000370828 ZCCHC17Q9NP64 241 aaKnown RBP14.27□□□□□ -0.13
GPC4-201ENST00000370828 PTPN21Q16825 1174 aa14.27□□□□□ -0.13
GPC4-201ENST00000370828 RAB34Q9BZG1 259 aa14.27□□□□□ -0.13
GPC4-201ENST00000370828 POLR2DO15514 142 aaKnown RBP14.26□□□□□ -0.13
GPC4-201ENST00000370828 USP28Q96RU2 1077 aa14.26□□□□□ -0.13
GPC4-201ENST00000370828 STMN4Q9H169 189 aaPredicted RBP14.26□□□□□ -0.13
GPC4-201ENST00000370828 MAP3K9P80192 1104 aa14.26□□□□□ -0.13
GPC4-201ENST00000370828 IFIT5Q13325 482 aaKnown RBP14.26□□□□□ -0.13
GPC4-201ENST00000370828 C11orf57Q6ZUT1 292 aaPredicted RBP14.26□□□□□ -0.13
GPC4-201ENST00000370828 TTC14Q96N46 770 aa14.26□□□□□ -0.13
GPC4-201ENST00000370828 PARD6BQ9BYG5 372 aa14.26□□□□□ -0.13
GPC4-201ENST00000370828 YY1AP1Q9H869 796 aa14.26□□□□□ -0.13
GPC4-201ENST00000370828 SNAPC4Q5SXM2 1469 aa14.26□□□□□ -0.13
GPC4-201ENST00000370828 TOPBP1Q92547 1522 aa14.26□□□□□ -0.13
GPC4-201ENST00000370828 IFT20Q8IY31 132 aa14.26□□□□□ -0.13
GPC4-201ENST00000370828 IFT74Q96LB3 600 aa14.26□□□□□ -0.13
GPC4-201ENST00000370828 SEC63Q9UGP8 760 aaKnown RBP14.26□□□□□ -0.13
GPC4-201ENST00000370828 FEZ2Q9UHY8 353 aaPredicted RBP14.26□□□□□ -0.13
GPC4-201ENST00000370828 BMP15O95972 392 aa14.26□□□□□ -0.13
GPC4-201ENST00000370828 SETDB1Q15047 1291 aa14.26□□□□□ -0.13
GPC4-201ENST00000370828 E2F5Q15329 346 aa14.26□□□□□ -0.13
GPC4-201ENST00000370828 LRRC23Q53EV4 343 aaPredicted RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms