RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 ZNF512BQ96KM6 892 aaPredicted RBP18.14■□□□□ 0.49
COL9A1-204ENST00000370496 SNRKQ9NRH2 765 aa18.14■□□□□ 0.49
COL9A1-204ENST00000370496 SERPINA10Q9UK55 444 aa18.14■□□□□ 0.49
COL9A1-204ENST00000370496 MYH2Q9UKX2 1941 aa18.13■□□□□ 0.49
COL9A1-204ENST00000370496 WNT10BO00744 389 aa18.13■□□□□ 0.49
COL9A1-204ENST00000370496 MYO1BO43795 1136 aa18.13■□□□□ 0.49
COL9A1-204ENST00000370496 NEFLP07196 543 aa18.13■□□□□ 0.49
COL9A1-204ENST00000370496 CRKP46108 304 aa18.13■□□□□ 0.49
COL9A1-204ENST00000370496 NBPF9Q3BBW0 867 aa18.13■□□□□ 0.49
COL9A1-204ENST00000370496 ANGEL2Q5VTE6 544 aaKnown RBP18.13■□□□□ 0.49
COL9A1-204ENST00000370496 SPTY2D1Q68D10 685 aaPredicted RBP18.13■□□□□ 0.49
COL9A1-204ENST00000370496 CNTROBQ8N137 903 aa18.13■□□□□ 0.49
COL9A1-204ENST00000370496 GPATCH3Q96I76 525 aa18.13■□□□□ 0.49
COL9A1-204ENST00000370496 DOCK2Q92608 1830 aa18.13■□□□□ 0.49
COL9A1-204ENST00000370496 ASTN2O75129 1339 aaPredicted RBP18.12■□□□□ 0.49
COL9A1-204ENST00000370496 TRPM7Q96QT4 1865 aa18.12■□□□□ 0.49
COL9A1-204ENST00000370496 SPDYE2BA6NHP3 402 aa18.11■□□□□ 0.49
COL9A1-204ENST00000370496 SPDYE6P0CI01 402 aa18.11■□□□□ 0.49
COL9A1-204ENST00000370496 HDLBPQ00341 1268 aaKnown RBP18.11■□□□□ 0.49
COL9A1-204ENST00000370496 ERICH6Q7L0X2 663 aa18.11■□□□□ 0.49
COL9A1-204ENST00000370496 KRT26Q7Z3Y9 468 aa18.11■□□□□ 0.49
COL9A1-204ENST00000370496 SULF1Q8IWU6 871 aa18.11■□□□□ 0.49
COL9A1-204ENST00000370496 MTMR14Q8NCE2 650 aa18.11■□□□□ 0.49
COL9A1-204ENST00000370496 GLIS2Q9BZE0 524 aaPredicted RBP18.11■□□□□ 0.49
COL9A1-204ENST00000370496 PCDHAC2Q9Y5I4 1007 aa18.11■□□□□ 0.49
COL9A1-204ENST00000370496 MYO5AQ9Y4I1 1855 aaKnown RBP18.11■□□□□ 0.49
COL9A1-204ENST00000370496 PITPNM2Q9BZ72 1349 aa18.1■□□□□ 0.49
COL9A1-204ENST00000370496 POLR2AP24928 1970 aaKnown RBP18.1■□□□□ 0.49
COL9A1-204ENST00000370496 ZAP70P43403 619 aa18.1■□□□□ 0.49
COL9A1-204ENST00000370496 ANKRD45Q5TZF3 282 aa18.1■□□□□ 0.49
COL9A1-204ENST00000370496 TBC1D9Q6ZT07 1266 aa18.1■□□□□ 0.49
COL9A1-204ENST00000370496 ZBED3Q96IU2 234 aaPredicted RBP18.1■□□□□ 0.49
COL9A1-204ENST00000370496 RAI14Q9P0K7 980 aa18.1■□□□□ 0.49
COL9A1-204ENST00000370496 LRP2BPQ9P2M1 347 aa18.1■□□□□ 0.49
COL9A1-204ENST00000370496 PGAP2Q9UHJ9 254 aa18.1■□□□□ 0.49
COL9A1-204ENST00000370496 CLRN2A0PK11 232 aa18.09■□□□□ 0.49
COL9A1-204ENST00000370496 ADM5C9JUS6 153 aa18.09■□□□□ 0.49
COL9A1-204ENST00000370496 DIXDC1Q155Q3 683 aa18.09■□□□□ 0.49
COL9A1-204ENST00000370496 CDC37L1Q7L3B6 337 aa18.09■□□□□ 0.49
COL9A1-204ENST00000370496 APOBEC3FQ8IUX4 373 aaKnown RBP18.09■□□□□ 0.49
COL9A1-204ENST00000370496 DNAJC2Q99543 621 aaKnown RBP18.09■□□□□ 0.49
COL9A1-204ENST00000370496 IGHDP01880 384 aa18.08■□□□□ 0.49
COL9A1-204ENST00000370496 CYP2E1P05181 493 aaPredicted RBP18.08■□□□□ 0.49
COL9A1-204ENST00000370496 B4GALNT3Q6L9W6 998 aa18.08■□□□□ 0.49
COL9A1-204ENST00000370496 SLF2Q8IX21 1173 aa18.08■□□□□ 0.49
COL9A1-204ENST00000370496 SMC5Q8IY18 1101 aa18.08■□□□□ 0.49
COL9A1-204ENST00000370496 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.08■□□□□ 0.49
COL9A1-204ENST00000370496 VEZTQ9HBM0 779 aa18.08■□□□□ 0.49
COL9A1-204ENST00000370496 NDUFB9Q9Y6M9 179 aa18.08■□□□□ 0.49
COL9A1-204ENST00000370496 PASKQ96RG2 1323 aa18.08■□□□□ 0.48
COL9A1-204ENST00000370496 TRAF5O00463 557 aa18.07■□□□□ 0.48
COL9A1-204ENST00000370496 ITGBL1O95965 494 aaPredicted RBP18.07■□□□□ 0.48
COL9A1-204ENST00000370496 MECOMQ03112 1051 aa18.07■□□□□ 0.48
COL9A1-204ENST00000370496 HHIPL2Q6UWX4 724 aa18.07■□□□□ 0.48
COL9A1-204ENST00000370496 USP48Q86UV5 1035 aa18.07■□□□□ 0.48
COL9A1-204ENST00000370496 PRMT6Q96LA8 375 aaPredicted RBP18.07■□□□□ 0.48
COL9A1-204ENST00000370496 ZDHHC15Q96MV8 337 aa18.07■□□□□ 0.48
COL9A1-204ENST00000370496 ECHDC1Q9NTX5 307 aa18.07■□□□□ 0.48
COL9A1-204ENST00000370496 TMOD2Q9NZR1 351 aa18.07■□□□□ 0.48
COL9A1-204ENST00000370496 DAGLAQ9Y4D2 1042 aa18.07■□□□□ 0.48
COL9A1-204ENST00000370496 HSPA6P17066 643 aa18.06■□□□□ 0.48
COL9A1-204ENST00000370496 ATP5JP18859 108 aa18.06■□□□□ 0.48
COL9A1-204ENST00000370496 GSTO1P78417 241 aa18.06■□□□□ 0.48
COL9A1-204ENST00000370496 ZNF408Q9H9D4 720 aa18.06■□□□□ 0.48
COL9A1-204ENST00000370496 PIH1D3Q9NQM4 214 aaKnown RBP18.06■□□□□ 0.48
COL9A1-204ENST00000370496 MYH7P12883 1935 aa18.06■□□□□ 0.48
COL9A1-204ENST00000370496 MROH7-TTC4A0A0A0MT08 1334 aa18.06■□□□□ 0.48
COL9A1-204ENST00000370496 AOX1Q06278 1338 aa18.06■□□□□ 0.48
COL9A1-204ENST00000370496 GOLIM4O00461 696 aa18.05■□□□□ 0.48
COL9A1-204ENST00000370496 IDH1O75874 414 aaKnown RBP18.05■□□□□ 0.48
COL9A1-204ENST00000370496 APLP1P51693 650 aa18.05■□□□□ 0.48
COL9A1-204ENST00000370496 TTF1Q15361 905 aaPredicted RBP18.05■□□□□ 0.48
COL9A1-204ENST00000370496 SPDYE2Q495Y8 402 aa18.05■□□□□ 0.48
COL9A1-204ENST00000370496 TSHZ3Q63HK5 1081 aa18.05■□□□□ 0.48
COL9A1-204ENST00000370496 MRIQ9BWK5 157 aa18.05■□□□□ 0.48
COL9A1-204ENST00000370496 LNPKQ9C0E8 428 aa18.05■□□□□ 0.48
COL9A1-204ENST00000370496 BOLA2Q9H3K6 86 aa18.05■□□□□ 0.48
COL9A1-204ENST00000370496 TDRD3Q9H7E2 651 aaKnown RBP18.05■□□□□ 0.48
COL9A1-204ENST00000370496 SCAF8Q9UPN6 1271 aaKnown RBP18.05■□□□□ 0.48
COL9A1-204ENST00000370496 MX1P20591 662 aa18.04■□□□□ 0.48
COL9A1-204ENST00000370496 TNFAIP1Q13829 316 aa18.04■□□□□ 0.48
COL9A1-204ENST00000370496 NSUN4Q96CB9 384 aaKnown RBP18.04■□□□□ 0.48
COL9A1-204ENST00000370496 ZNF70Q9UC06 446 aaPredicted RBP18.04■□□□□ 0.48
COL9A1-204ENST00000370496 GAKO14976 1311 aa18.04■□□□□ 0.48
COL9A1-204ENST00000370496 TTC41PQ6P2S7 1318 aa18.04■□□□□ 0.48
COL9A1-204ENST00000370496 ERC2O15083 957 aa18.04■□□□□ 0.48
COL9A1-204ENST00000370496 FMR1Q06787 632 aaKnown RBP eCLIP18.04■□□□□ 0.48
COL9A1-204ENST00000370496 NAA16Q6N069 864 aaPredicted RBP18.04■□□□□ 0.48
COL9A1-204ENST00000370496 OTUD7AQ8TE49 926 aaPredicted RBP18.04■□□□□ 0.48
COL9A1-204ENST00000370496 HAUS7Q99871 368 aa18.04■□□□□ 0.48
COL9A1-204ENST00000370496 NOL10Q9BSC4 688 aaKnown RBP18.04■□□□□ 0.48
COL9A1-204ENST00000370496 ANTXR1Q9H6X2 564 aa18.04■□□□□ 0.48
COL9A1-204ENST00000370496 PAG1Q9NWQ8 432 aa18.04■□□□□ 0.48
COL9A1-204ENST00000370496 CELF2O95319 508 aaKnown RBP18.03■□□□□ 0.48
COL9A1-204ENST00000370496 LDHCP07864 332 aa18.03■□□□□ 0.48
COL9A1-204ENST00000370496 BTDP43251 543 aa18.03■□□□□ 0.48
COL9A1-204ENST00000370496 NUCB1Q02818 461 aa18.03■□□□□ 0.48
COL9A1-204ENST00000370496 MAP3K12Q12852 859 aa18.03■□□□□ 0.48
COL9A1-204ENST00000370496 APOBEC3HQ6NTF7 200 aaKnown RBP18.03■□□□□ 0.48
COL9A1-204ENST00000370496 CHD1LQ86WJ1 897 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms