RNA–Protein interactions for RNA: ENST00000369846.8

LCA5-201, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-201ENST00000369846 ARHGAP6O43182 974 aa9.63□□□□□ -0.87
LCA5-201ENST00000369846 HSPA1LP34931 641 aa9.63□□□□□ -0.87
LCA5-201ENST00000369846 CFAP70Q5T0N1 1121 aa9.63□□□□□ -0.87
LCA5-201ENST00000369846 TRMT2AQ8IZ69 625 aaKnown RBP9.63□□□□□ -0.87
LCA5-201ENST00000369846 DDX12PQ92771 950 aa9.63□□□□□ -0.87
LCA5-201ENST00000369846 PLA2R1Q13018 1463 aa9.63□□□□□ -0.87
LCA5-201ENST00000369846 BAG2O95816 211 aa9.63□□□□□ -0.87
LCA5-201ENST00000369846 HAND2P61296 217 aa9.63□□□□□ -0.87
LCA5-201ENST00000369846 RASEFQ8IZ41 740 aa9.63□□□□□ -0.87
LCA5-201ENST00000369846 IGSF22Q8N9C0 903 aa9.63□□□□□ -0.87
LCA5-201ENST00000369846 DDX41Q9UJV9 622 aaKnown RBP9.63□□□□□ -0.87
LCA5-201ENST00000369846 SLC12A7Q9Y666 1083 aa9.63□□□□□ -0.87
LCA5-201ENST00000369846 CCDC194A0A1B0GVG4 234 aa9.63□□□□□ -0.87
LCA5-201ENST00000369846 ATP2A1O14983 1001 aa9.63□□□□□ -0.87
LCA5-201ENST00000369846 ZWINTO95229 277 aa9.63□□□□□ -0.87
LCA5-201ENST00000369846 GYS2P54840 703 aa9.63□□□□□ -0.87
LCA5-201ENST00000369846 FANCCQ00597 558 aa9.63□□□□□ -0.87
LCA5-201ENST00000369846 PLCB3Q01970 1234 aa9.63□□□□□ -0.87
LCA5-201ENST00000369846 SSRP1Q08945 709 aaKnown RBP9.63□□□□□ -0.87
LCA5-201ENST00000369846 PRR16Q569H4 304 aa9.63□□□□□ -0.87
LCA5-201ENST00000369846 IFT20Q8IY31 132 aa9.63□□□□□ -0.87
LCA5-201ENST00000369846 TTC16Q8NEE8 873 aa9.63□□□□□ -0.87
LCA5-201ENST00000369846 AIDAQ96BJ3 306 aa9.63□□□□□ -0.87
LCA5-201ENST00000369846 MIS18AQ9NYP9 233 aa9.63□□□□□ -0.87
LCA5-201ENST00000369846 SUFUQ9UMX1 484 aa9.63□□□□□ -0.87
LCA5-201ENST00000369846 CCT6AP40227 531 aaKnown RBP9.62□□□□□ -0.87
LCA5-201ENST00000369846 HDAC1Q13547 482 aaPredicted RBP9.62□□□□□ -0.87
LCA5-201ENST00000369846 GNPTABQ3T906 1256 aa9.62□□□□□ -0.87
LCA5-201ENST00000369846 CCDC65Q8IXS2 484 aa9.62□□□□□ -0.87
LCA5-201ENST00000369846 C16orf71Q8IYS4 520 aaPredicted RBP9.62□□□□□ -0.87
LCA5-201ENST00000369846 ARMC2Q8NEN0 867 aa9.62□□□□□ -0.87
LCA5-201ENST00000369846 FAM71BQ8TC56 605 aa9.62□□□□□ -0.87
LCA5-201ENST00000369846 MGARPQ8TDB4 240 aa9.62□□□□□ -0.87
LCA5-201ENST00000369846 EFCAB8A8MWE9 144 aa9.62□□□□□ -0.87
LCA5-201ENST00000369846 MINDY4BA8MYZ0 360 aa9.62□□□□□ -0.87
LCA5-201ENST00000369846 SPECC1L-ADORA2AF8WAN1 911 aa9.62□□□□□ -0.87
LCA5-201ENST00000369846 IFIT3O14879 490 aaKnown RBP9.62□□□□□ -0.87
LCA5-201ENST00000369846 PSMD2Q13200 908 aa9.62□□□□□ -0.87
LCA5-201ENST00000369846 TUBB2AQ13885 445 aa9.62□□□□□ -0.87
LCA5-201ENST00000369846 NUTM2GQ5VZR2 741 aa9.62□□□□□ -0.87
LCA5-201ENST00000369846 KCTD16Q68DU8 428 aa9.62□□□□□ -0.87
LCA5-201ENST00000369846 CCDC85AQ96PX6 553 aaPredicted RBP9.62□□□□□ -0.87
LCA5-201ENST00000369846 ESYT1Q9BSJ8 1104 aa9.62□□□□□ -0.87
LCA5-201ENST00000369846 TUBB2BQ9BVA1 445 aa9.62□□□□□ -0.87
LCA5-201ENST00000369846 CXorf56Q9H5V9 222 aa9.62□□□□□ -0.87
LCA5-201ENST00000369846 KIF21AQ7Z4S6 1674 aa9.62□□□□□ -0.87
LCA5-201ENST00000369846 TRPM1Q7Z4N2 1603 aa9.62□□□□□ -0.87
LCA5-201ENST00000369846 KIF1CO43896 1103 aaKnown RBP9.62□□□□□ -0.87
LCA5-201ENST00000369846 ECM2O94769 699 aaPredicted RBP9.62□□□□□ -0.87
LCA5-201ENST00000369846 AK2P54819 239 aa9.62□□□□□ -0.87
LCA5-201ENST00000369846 NLRP5P59047 1200 aa9.62□□□□□ -0.87
LCA5-201ENST00000369846 CCDC62Q6P9F0 684 aa9.62□□□□□ -0.87
LCA5-201ENST00000369846 GSTA5Q7RTV2 222 aa9.62□□□□□ -0.87
LCA5-201ENST00000369846 SPATS2Q86XZ4 545 aaKnown RBP9.62□□□□□ -0.87
LCA5-201ENST00000369846 NUTM2AQ8IVF1 878 aaPredicted RBP9.62□□□□□ -0.87
LCA5-201ENST00000369846 ARHGAP24Q8N264 748 aa9.62□□□□□ -0.87
LCA5-201ENST00000369846 DHX58Q96C10 678 aa9.62□□□□□ -0.87
LCA5-201ENST00000369846 MED4Q9NPJ6 270 aa9.62□□□□□ -0.87
LCA5-201ENST00000369846 TCP11L1Q9NUJ3 509 aa9.62□□□□□ -0.87
LCA5-201ENST00000369846 PPP1R9AQ9ULJ8 1098 aa9.62□□□□□ -0.87
LCA5-201ENST00000369846 COMMD10Q9Y6G5 202 aa9.62□□□□□ -0.87
LCA5-201ENST00000369846 RAPGEF6Q8TEU7 1601 aa9.61□□□□□ -0.87
LCA5-201ENST00000369846 CEP170Q5SW79 1584 aa9.61□□□□□ -0.87
LCA5-201ENST00000369846 PSMA7O14818 248 aa9.61□□□□□ -0.87
LCA5-201ENST00000369846 GUCY2CP25092 1073 aa9.61□□□□□ -0.87
LCA5-201ENST00000369846 HIBCHQ6NVY1 386 aaPredicted RBP9.61□□□□□ -0.87
LCA5-201ENST00000369846 EXOC4Q96A65 974 aa9.61□□□□□ -0.87
LCA5-201ENST00000369846 INTS4Q96HW7 963 aaKnown RBP9.61□□□□□ -0.87
LCA5-201ENST00000369846 TSNARE1Q96NA8 513 aa9.61□□□□□ -0.87
LCA5-201ENST00000369846 TTF2Q9UNY4 1162 aaKnown RBP9.61□□□□□ -0.87
LCA5-201ENST00000369846 AKAP2Q9Y2D5 859 aa9.61□□□□□ -0.87
LCA5-201ENST00000369846 ADGRL2O95490 1459 aa9.61□□□□□ -0.87
LCA5-201ENST00000369846 WDR7Q9Y4E6 1490 aa9.61□□□□□ -0.87
LCA5-201ENST00000369846 ELP1O95163 1332 aa9.61□□□□□ -0.87
LCA5-201ENST00000369846 EIF3CLB5ME19 914 aaKnown RBP9.61□□□□□ -0.87
LCA5-201ENST00000369846 ZNF213O14771 459 aa9.61□□□□□ -0.87
LCA5-201ENST00000369846 MX2P20592 715 aa9.61□□□□□ -0.87
LCA5-201ENST00000369846 POLD1P28340 1107 aa9.61□□□□□ -0.87
LCA5-201ENST00000369846 GJC1P36383 396 aa9.61□□□□□ -0.87
LCA5-201ENST00000369846 ZNF76P36508 570 aa9.61□□□□□ -0.87
LCA5-201ENST00000369846 TADA2BQ86TJ2 420 aa9.61□□□□□ -0.87
LCA5-201ENST00000369846 KSR1Q8IVT5 923 aa9.61□□□□□ -0.87
LCA5-201ENST00000369846 KLHL7Q8IXQ5 586 aa9.61□□□□□ -0.87
LCA5-201ENST00000369846 EIF3CQ99613 913 aaKnown RBP9.61□□□□□ -0.87
LCA5-201ENST00000369846 BICC1Q9H694 974 aaKnown RBP9.61□□□□□ -0.87
LCA5-201ENST00000369846 SCAPERQ9BY12 1400 aa9.61□□□□□ -0.87
LCA5-201ENST00000369846 TMEM110-MUSTN1A8MSY1 372 aa9.61□□□□□ -0.87
LCA5-201ENST00000369846 GUCY2FP51841 1108 aa9.61□□□□□ -0.87
LCA5-201ENST00000369846 CETN1Q12798 172 aa9.61□□□□□ -0.87
LCA5-201ENST00000369846 PAK2Q13177 524 aa9.61□□□□□ -0.87
LCA5-201ENST00000369846 LONRF2Q1L5Z9 754 aa9.61□□□□□ -0.87
LCA5-201ENST00000369846 ANKRD20A3Q5VUR7 823 aa9.61□□□□□ -0.87
LCA5-201ENST00000369846 FYB2Q5VWT5 728 aa9.61□□□□□ -0.87
LCA5-201ENST00000369846 SLC26A6Q9BXS9 759 aa9.61□□□□□ -0.87
LCA5-201ENST00000369846 CHUKO15111 745 aa9.61□□□□□ -0.87
LCA5-201ENST00000369846 ALDH1L2Q3SY69 923 aa9.61□□□□□ -0.87
LCA5-201ENST00000369846 ARMC9Q7Z3E5 817 aa9.61□□□□□ -0.87
LCA5-201ENST00000369846 IQCA1Q86XH1 822 aa9.61□□□□□ -0.87
LCA5-201ENST00000369846 RAPGEF4Q8WZA2 1011 aa9.61□□□□□ -0.87
LCA5-201ENST00000369846 CARD14Q9BXL6 1004 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms