RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 TTF1Q15361 905 aaPredicted RBP20.68■□□□□ 0.9
UBE3D-203ENST00000369747 DCAF8Q5TAQ9 597 aa20.68■□□□□ 0.9
UBE3D-203ENST00000369747 KCNB2Q92953 911 aa20.68■□□□□ 0.9
UBE3D-203ENST00000369747 TAOK3Q9H2K8 898 aa20.68■□□□□ 0.9
UBE3D-203ENST00000369747 COL4A5P29400 1685 aa20.68■□□□□ 0.9
UBE3D-203ENST00000369747 PDS5AQ29RF7 1337 aaKnown RBP20.67■□□□□ 0.9
UBE3D-203ENST00000369747 ZBTB22O15209 634 aa20.66■□□□□ 0.9
UBE3D-203ENST00000369747 ECE2O60344 883 aa20.66■□□□□ 0.9
UBE3D-203ENST00000369747 PKP1Q13835 747 aa20.66■□□□□ 0.9
UBE3D-203ENST00000369747 TRAK2O60296 914 aa20.66■□□□□ 0.9
UBE3D-203ENST00000369747 GTF2IP78347 998 aa20.66■□□□□ 0.9
UBE3D-203ENST00000369747 NECTIN1Q15223 517 aa20.66■□□□□ 0.9
UBE3D-203ENST00000369747 TTC14Q96N46 770 aa20.66■□□□□ 0.9
UBE3D-203ENST00000369747 LRP2BPQ9P2M1 347 aa20.66■□□□□ 0.9
UBE3D-203ENST00000369747 DOCK2Q92608 1830 aa20.66■□□□□ 0.9
UBE3D-203ENST00000369747 RFX7Q2KHR2 1363 aa20.65■□□□□ 0.9
UBE3D-203ENST00000369747 SCN9AQ15858 1988 aa20.65■□□□□ 0.9
UBE3D-203ENST00000369747 YBX3P16989 372 aaKnown RBP eCLIP20.65■□□□□ 0.9
UBE3D-203ENST00000369747 RASSF7Q02833 373 aa20.65■□□□□ 0.9
UBE3D-203ENST00000369747 NOL8Q76FK4 1167 aaKnown RBP20.65■□□□□ 0.9
UBE3D-203ENST00000369747 PODNQ7Z5L7 613 aa20.65■□□□□ 0.9
UBE3D-203ENST00000369747 LARGE2Q8N3Y3 721 aa20.65■□□□□ 0.9
UBE3D-203ENST00000369747 MAP4K1Q92918 833 aa20.65■□□□□ 0.9
UBE3D-203ENST00000369747 PRDX5P30044 214 aa20.65■□□□□ 0.9
UBE3D-203ENST00000369747 PRELPP51888 382 aa20.65■□□□□ 0.9
UBE3D-203ENST00000369747 SLC9C2Q5TAH2 1124 aa20.65■□□□□ 0.9
UBE3D-203ENST00000369747 IARSP41252 1262 aaKnown RBP20.64■□□□□ 0.89
UBE3D-203ENST00000369747 GRIK5Q16478 980 aa20.64■□□□□ 0.89
UBE3D-203ENST00000369747 WDR66Q8TBY9 1149 aa20.64■□□□□ 0.89
UBE3D-203ENST00000369747 FBXW7Q969H0 707 aa20.64■□□□□ 0.89
UBE3D-203ENST00000369747 INTS4Q96HW7 963 aaKnown RBP20.64■□□□□ 0.89
UBE3D-203ENST00000369747 SEC62Q99442 399 aaKnown RBP20.64■□□□□ 0.89
UBE3D-203ENST00000369747 RBM8AQ9Y5S9 174 aaKnown RBP20.64■□□□□ 0.89
UBE3D-203ENST00000369747 MYH7P12883 1935 aa20.64■□□□□ 0.89
UBE3D-203ENST00000369747 YDJCA8MPS7 323 aa20.63■□□□□ 0.89
UBE3D-203ENST00000369747 RNF113AO15541 343 aaKnown RBP20.63■□□□□ 0.89
UBE3D-203ENST00000369747 TTLL5Q6EMB2 1281 aa20.63■□□□□ 0.89
UBE3D-203ENST00000369747 MXD3Q9BW11 206 aa20.63■□□□□ 0.89
UBE3D-203ENST00000369747 BAG4O95429 457 aaKnown RBP20.63■□□□□ 0.89
UBE3D-203ENST00000369747 MAP3K12Q12852 859 aa20.63■□□□□ 0.89
UBE3D-203ENST00000369747 ARHGAP27Q6ZUM4 889 aa20.63■□□□□ 0.89
UBE3D-203ENST00000369747 ZNF589Q86UQ0 364 aaPredicted RBP20.63■□□□□ 0.89
UBE3D-203ENST00000369747 ZNF384Q8TF68 577 aa20.63■□□□□ 0.89
UBE3D-203ENST00000369747 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.63■□□□□ 0.89
UBE3D-203ENST00000369747 RAI14Q9P0K7 980 aa20.63■□□□□ 0.89
UBE3D-203ENST00000369747 ZDHHC9Q9Y397 364 aa20.63■□□□□ 0.89
UBE3D-203ENST00000369747 FAM205AQ6ZU69 1335 aa20.62■□□□□ 0.89
UBE3D-203ENST00000369747 PDE6AP16499 860 aa20.62■□□□□ 0.89
UBE3D-203ENST00000369747 ADCK5Q3MIX3 580 aa20.62■□□□□ 0.89
UBE3D-203ENST00000369747 MFSD14BQ5SR56 506 aa20.62■□□□□ 0.89
UBE3D-203ENST00000369747 MAGEB6Q8N7X4 407 aa20.62■□□□□ 0.89
UBE3D-203ENST00000369747 VPS33BQ9H267 617 aa20.62■□□□□ 0.89
UBE3D-203ENST00000369747 SALL1Q9NSC2 1324 aa20.62■□□□□ 0.89
UBE3D-203ENST00000369747 CASTP20810 708 aaKnown RBP20.61■□□□□ 0.89
UBE3D-203ENST00000369747 ADD2P35612 726 aa20.61■□□□□ 0.89
UBE3D-203ENST00000369747 AK2P54819 239 aa20.61■□□□□ 0.89
UBE3D-203ENST00000369747 CREB3L3Q68CJ9 461 aa20.61■□□□□ 0.89
UBE3D-203ENST00000369747 TM6SF1Q9BZW5 370 aa20.61■□□□□ 0.89
UBE3D-203ENST00000369747 LTBP3Q9NS15 1303 aa20.61■□□□□ 0.89
UBE3D-203ENST00000369747 ZMYM1Q5SVZ6 1142 aa20.61■□□□□ 0.89
UBE3D-203ENST00000369747 CERS5Q8N5B7 392 aa20.61■□□□□ 0.89
UBE3D-203ENST00000369747 ZNF532Q9HCE3 1301 aa20.61■□□□□ 0.89
UBE3D-203ENST00000369747 TCRBV5S4A2TA0A5A2 114 aa20.6■□□□□ 0.89
UBE3D-203ENST00000369747 MECOMQ03112 1051 aa20.6■□□□□ 0.89
UBE3D-203ENST00000369747 OSBP2Q969R2 916 aa20.6■□□□□ 0.89
UBE3D-203ENST00000369747 JAKMIP1Q96N16 626 aaKnown RBP20.6■□□□□ 0.89
UBE3D-203ENST00000369747 ZSWIM6Q9HCJ5 1215 aa20.6■□□□□ 0.89
UBE3D-203ENST00000369747 ZFYP08048 801 aaPredicted RBP20.59■□□□□ 0.89
UBE3D-203ENST00000369747 CPA1P15085 419 aa20.59■□□□□ 0.89
UBE3D-203ENST00000369747 PTMSP20962 102 aa20.59■□□□□ 0.89
UBE3D-203ENST00000369747 LRRFIP1Q32MZ4 808 aaKnown RBP20.59■□□□□ 0.89
UBE3D-203ENST00000369747 RUFY3Q7L099 469 aa20.59■□□□□ 0.89
UBE3D-203ENST00000369747 ADGRA1Q86SQ6 560 aa20.59■□□□□ 0.89
UBE3D-203ENST00000369747 TICAM2Q86XR7 235 aa20.59■□□□□ 0.89
UBE3D-203ENST00000369747 NSUN4Q96CB9 384 aaKnown RBP20.59■□□□□ 0.89
UBE3D-203ENST00000369747 PUS7LQ9H0K6 701 aaKnown RBP20.59■□□□□ 0.89
UBE3D-203ENST00000369747 CCDC88AQ3V6T2 1871 aa20.59■□□□□ 0.89
UBE3D-203ENST00000369747 ZNF646O15015 1829 aaPredicted RBP20.59■□□□□ 0.89
UBE3D-203ENST00000369747 SLC27A2O14975 620 aa20.59■□□□□ 0.89
UBE3D-203ENST00000369747 LDHBP07195 334 aaKnown RBP20.59■□□□□ 0.89
UBE3D-203ENST00000369747 ZKSCAN1P17029 563 aaPredicted RBP20.59■□□□□ 0.89
UBE3D-203ENST00000369747 ZSCAN25Q6NSZ9 544 aa20.59■□□□□ 0.89
UBE3D-203ENST00000369747 CCDC129Q6ZRS4 1044 aa20.59■□□□□ 0.89
UBE3D-203ENST00000369747 NIM1KQ8IY84 436 aa20.59■□□□□ 0.89
UBE3D-203ENST00000369747 TBC1D22AQ8WUA7 517 aa20.59■□□□□ 0.89
UBE3D-203ENST00000369747 RPAP1Q9BWH6 1393 aaPredicted RBP20.58■□□□□ 0.89
UBE3D-203ENST00000369747 USP17L3A6NCW0 530 aa20.58■□□□□ 0.88
UBE3D-203ENST00000369747 USP17L4A6NCW7 530 aa20.58■□□□□ 0.88
UBE3D-203ENST00000369747 M0R2C6 588 aa20.58■□□□□ 0.88
UBE3D-203ENST00000369747 RAD17O75943 681 aa20.58■□□□□ 0.88
UBE3D-203ENST00000369747 UBE3CQ15386 1083 aa20.58■□□□□ 0.88
UBE3D-203ENST00000369747 DACT2Q5SW24 774 aa20.58■□□□□ 0.88
UBE3D-203ENST00000369747 STRIP1Q5VSL9 837 aa20.58■□□□□ 0.88
UBE3D-203ENST00000369747 USP17L1Q7RTZ2 530 aa20.58■□□□□ 0.88
UBE3D-203ENST00000369747 JDP2Q8WYK2 163 aa20.58■□□□□ 0.88
UBE3D-203ENST00000369747 ZNRF3Q9ULT6 936 aa20.58■□□□□ 0.88
UBE3D-203ENST00000369747 MAST3O60307 1309 aa20.57■□□□□ 0.88
UBE3D-203ENST00000369747 MCMDC2Q4G0Z9 681 aa20.57■□□□□ 0.88
UBE3D-203ENST00000369747 VPS53Q5VIR6 699 aa20.57■□□□□ 0.88
UBE3D-203ENST00000369747 SPTY2D1Q68D10 685 aaPredicted RBP20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms