RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 KDM5BQ9UGL1 1544 aa11.74□□□□□ -0.53
PRDM1-201ENST00000369089 TMED1Q13445 227 aa11.74□□□□□ -0.53
PRDM1-201ENST00000369089 GKAP1Q5VSY0 366 aaPredicted RBP11.74□□□□□ -0.53
PRDM1-201ENST00000369089 RINLQ6ZS11 566 aa11.74□□□□□ -0.53
PRDM1-201ENST00000369089 ARHGAP22Q7Z5H3 698 aa11.74□□□□□ -0.53
PRDM1-201ENST00000369089 TRAPPC8Q9Y2L5 1435 aa11.74□□□□□ -0.53
PRDM1-201ENST00000369089 ITSN2Q9NZM3 1697 aa11.74□□□□□ -0.53
PRDM1-201ENST00000369089 LMOD1P29536 600 aaPredicted RBP11.74□□□□□ -0.53
PRDM1-201ENST00000369089 ICA1Q05084 483 aa11.74□□□□□ -0.53
PRDM1-201ENST00000369089 KIAA0825Q8IV33 1275 aa11.74□□□□□ -0.53
PRDM1-201ENST00000369089 BICD1Q96G01 975 aa11.74□□□□□ -0.53
PRDM1-201ENST00000369089 DISP3Q9P2K9 1392 aa11.73□□□□□ -0.53
PRDM1-201ENST00000369089 DDX58O95786 925 aaKnown RBP11.73□□□□□ -0.53
PRDM1-201ENST00000369089 RPAP2Q8IXW5 612 aaPredicted RBP11.73□□□□□ -0.53
PRDM1-201ENST00000369089 ARL10Q8N8L6 244 aa11.73□□□□□ -0.53
PRDM1-201ENST00000369089 RGL1Q9NZL6 768 aa11.73□□□□□ -0.53
PRDM1-201ENST00000369089 FCHSD2O94868 740 aa11.73□□□□□ -0.53
PRDM1-201ENST00000369089 WDR78Q5VTH9 848 aa11.73□□□□□ -0.53
PRDM1-201ENST00000369089 HIBCHQ6NVY1 386 aaPredicted RBP11.73□□□□□ -0.53
PRDM1-201ENST00000369089 SND1Q7KZF4 910 aaKnown RBP eCLIP11.73□□□□□ -0.53
PRDM1-201ENST00000369089 TDRD7Q8NHU6 1098 aaKnown RBP11.73□□□□□ -0.53
PRDM1-201ENST00000369089 KLHDC4Q8TBB5 520 aa11.73□□□□□ -0.53
PRDM1-201ENST00000369089 FHOD1Q9Y613 1164 aa11.73□□□□□ -0.53
PRDM1-201ENST00000369089 PPANQ9NQ55 473 aaKnown RBP11.73□□□□□ -0.53
PRDM1-201ENST00000369089 HMGB1P1B2RPK0 211 aaPredicted RBP11.72□□□□□ -0.53
PRDM1-201ENST00000369089 PECAM1P16284 738 aaPredicted RBP11.72□□□□□ -0.53
PRDM1-201ENST00000369089 PDE1CQ14123 709 aaPredicted RBP11.72□□□□□ -0.53
PRDM1-201ENST00000369089 NUP88Q99567 741 aaPredicted RBP11.72□□□□□ -0.53
PRDM1-201ENST00000369089 AATFQ9NY61 560 aaKnown RBP eCLIP11.72□□□□□ -0.53
PRDM1-201ENST00000369089 SGSM2O43147 1006 aa11.72□□□□□ -0.53
PRDM1-201ENST00000369089 GIGYF1O75420 1035 aaPredicted RBP11.72□□□□□ -0.53
PRDM1-201ENST00000369089 RBM5P52756 815 aaKnown RBP eCLIP11.72□□□□□ -0.53
PRDM1-201ENST00000369089 HOOK2Q96ED9 719 aa11.72□□□□□ -0.53
PRDM1-201ENST00000369089 CEP63Q96MT8 703 aa11.72□□□□□ -0.53
PRDM1-201ENST00000369089 ALS2CR12Q96Q35 445 aa11.72□□□□□ -0.53
PRDM1-201ENST00000369089 CD248Q9HCU0 757 aa11.72□□□□□ -0.53
PRDM1-201ENST00000369089 TRIM27P14373 513 aa11.72□□□□□ -0.53
PRDM1-201ENST00000369089 TMPOP42166 694 aaKnown RBP11.72□□□□□ -0.53
PRDM1-201ENST00000369089 RCSD1Q6JBY9 416 aa11.72□□□□□ -0.53
PRDM1-201ENST00000369089 IQUBQ8NA54 791 aa11.72□□□□□ -0.53
PRDM1-201ENST00000369089 FAF1Q9UNN5 650 aaPredicted RBP11.72□□□□□ -0.53
PRDM1-201ENST00000369089 RABGAP1Q9Y3P9 1069 aa11.72□□□□□ -0.53
PRDM1-201ENST00000369089 ABCA5Q8WWZ7 1642 aa11.72□□□□□ -0.53
PRDM1-201ENST00000369089 MAFGO15525 162 aa11.72□□□□□ -0.53
PRDM1-201ENST00000369089 SETDB1Q15047 1291 aa11.72□□□□□ -0.53
PRDM1-201ENST00000369089 SAFBQ15424 915 aaKnown RBP eCLIP11.72□□□□□ -0.53
PRDM1-201ENST00000369089 CCDC26Q8TAB7 109 aa11.72□□□□□ -0.53
PRDM1-201ENST00000369089 THUMPD2Q9BTF0 503 aaKnown RBP11.72□□□□□ -0.53
PRDM1-201ENST00000369089 DUOX2Q9NRD8 1548 aa11.72□□□□□ -0.53
PRDM1-201ENST00000369089 FAM135AQ9P2D6 1515 aa11.72□□□□□ -0.53
PRDM1-201ENST00000369089 DYTNA2CJ06 578 aa11.71□□□□□ -0.53
PRDM1-201ENST00000369089 TACC1O75410 805 aa11.71□□□□□ -0.53
PRDM1-201ENST00000369089 FERP16591 822 aa11.71□□□□□ -0.53
PRDM1-201ENST00000369089 ATP1A2P50993 1020 aa11.71□□□□□ -0.53
PRDM1-201ENST00000369089 PAPOLAP51003 745 aaKnown RBP11.71□□□□□ -0.53
PRDM1-201ENST00000369089 SFSWAPQ12872 951 aaKnown RBP11.71□□□□□ -0.53
PRDM1-201ENST00000369089 GRAMD4Q6IC98 578 aa11.71□□□□□ -0.53
PRDM1-201ENST00000369089 STMN2Q93045 179 aa11.71□□□□□ -0.53
PRDM1-201ENST00000369089 ZNF428Q96B54 188 aa11.71□□□□□ -0.53
PRDM1-201ENST00000369089 NAP1L3Q99457 506 aaPredicted RBP11.71□□□□□ -0.53
PRDM1-201ENST00000369089 CWC25Q9NXE8 425 aaPredicted RBP11.71□□□□□ -0.53
PRDM1-201ENST00000369089 SYCP3Q8IZU3 236 aa11.71□□□□□ -0.53
PRDM1-201ENST00000369089 THOC1Q96FV9 657 aaKnown RBP11.71□□□□□ -0.53
PRDM1-201ENST00000369089 RPGRIP1Q96KN7 1286 aa11.71□□□□□ -0.53
PRDM1-201ENST00000369089 CAPZA3Q96KX2 299 aa11.71□□□□□ -0.53
PRDM1-201ENST00000369089 IFIT2P09913 472 aaKnown RBP11.71□□□□□ -0.54
PRDM1-201ENST00000369089 TMEM132AQ24JP5 1023 aa11.71□□□□□ -0.54
PRDM1-201ENST00000369089 HOOK3Q86VS8 718 aa11.71□□□□□ -0.54
PRDM1-201ENST00000369089 CCDC155Q8N6L0 562 aa11.71□□□□□ -0.54
PRDM1-201ENST00000369089 DAAM1Q9Y4D1 1078 aa11.71□□□□□ -0.54
PRDM1-201ENST00000369089 MEFVO15553 781 aaPredicted RBP11.71□□□□□ -0.54
PRDM1-201ENST00000369089 MIER3Q7Z3K6 550 aa11.71□□□□□ -0.54
PRDM1-201ENST00000369089 MFN1Q8IWA4 741 aa11.71□□□□□ -0.54
PRDM1-201ENST00000369089 MPHOSPH6Q99547 160 aaKnown RBP11.71□□□□□ -0.54
PRDM1-201ENST00000369089 ZSCAN16Q9H4T2 348 aaPredicted RBP11.71□□□□□ -0.54
PRDM1-201ENST00000369089 ZNF189O75820 626 aaPredicted RBP11.7□□□□□ -0.54
PRDM1-201ENST00000369089 TROVE2P10155 538 aaKnown RBP eCLIP11.7□□□□□ -0.54
PRDM1-201ENST00000369089 H2AFXP16104 143 aaPredicted RBP11.7□□□□□ -0.54
PRDM1-201ENST00000369089 MORC4Q8TE76 937 aa11.7□□□□□ -0.54
PRDM1-201ENST00000369089 C17orf50Q8WW18 174 aa11.7□□□□□ -0.54
PRDM1-201ENST00000369089 KCNF1Q9H3M0 494 aa11.7□□□□□ -0.54
PRDM1-201ENST00000369089 UTP6Q9NYH9 597 aaKnown RBP11.7□□□□□ -0.54
PRDM1-201ENST00000369089 HIP1O00291 1037 aa11.7□□□□□ -0.54
PRDM1-201ENST00000369089 IRF6O14896 467 aa11.7□□□□□ -0.54
PRDM1-201ENST00000369089 DRP2Q13474 957 aa11.7□□□□□ -0.54
PRDM1-201ENST00000369089 FCHSD1Q86WN1 690 aa11.7□□□□□ -0.54
PRDM1-201ENST00000369089 SPINK5Q9NQ38 1064 aaPredicted RBP11.7□□□□□ -0.54
PRDM1-201ENST00000369089 PAPOLBQ9NRJ5 636 aaKnown RBP11.7□□□□□ -0.54
PRDM1-201ENST00000369089 UBAP1Q9NZ09 502 aa11.7□□□□□ -0.54
PRDM1-201ENST00000369089 NSFL1CQ9UNZ2 370 aaKnown RBP11.7□□□□□ -0.54
PRDM1-201ENST00000369089 STK38LQ9Y2H1 464 aa11.7□□□□□ -0.54
PRDM1-201ENST00000369089 COG7P83436 770 aa11.7□□□□□ -0.54
PRDM1-201ENST00000369089 RUFY4Q6ZNE9 571 aa11.7□□□□□ -0.54
PRDM1-201ENST00000369089 RAB3IPQ96QF0 476 aaPredicted RBP11.7□□□□□ -0.54
PRDM1-201ENST00000369089 TPCN1Q9ULQ1 816 aa11.7□□□□□ -0.54
PRDM1-201ENST00000369089 RALGAPBQ86X10 1494 aa11.7□□□□□ -0.54
PRDM1-201ENST00000369089 VIMP08670 466 aaKnown RBP11.69□□□□□ -0.54
PRDM1-201ENST00000369089 RFC1P35251 1148 aaPredicted RBP11.69□□□□□ -0.54
PRDM1-201ENST00000369089 CEBPAP49715 358 aaPredicted RBP11.69□□□□□ -0.54
PRDM1-201ENST00000369089 SSH1Q8WYL5 1049 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms