RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 ZNF589Q86UQ0 364 aaPredicted RBP14.78□□□□□ -0.04
TUBE1-202ENST00000368662 SEC62Q99442 399 aaKnown RBP14.78□□□□□ -0.04
TUBE1-202ENST00000368662 PUS7LQ9H0K6 701 aaKnown RBP14.78□□□□□ -0.04
TUBE1-202ENST00000368662 MECOMQ03112 1051 aa14.77□□□□□ -0.04
TUBE1-202ENST00000368662 SLF2Q8IX21 1173 aa14.77□□□□□ -0.04
TUBE1-202ENST00000368662 AIDAQ96BJ3 306 aa14.77□□□□□ -0.04
TUBE1-202ENST00000368662 RBM19Q9Y4C8 960 aaKnown RBP14.77□□□□□ -0.04
TUBE1-202ENST00000368662 SRCAPQ6ZRS2 3230 aa14.77□□□□□ -0.04
TUBE1-202ENST00000368662 MYO5AQ9Y4I1 1855 aaKnown RBP14.77□□□□□ -0.05
TUBE1-202ENST00000368662 USP17L3A6NCW0 530 aa14.77□□□□□ -0.05
TUBE1-202ENST00000368662 USP17L4A6NCW7 530 aa14.77□□□□□ -0.05
TUBE1-202ENST00000368662 M0R2C6 588 aa14.77□□□□□ -0.05
TUBE1-202ENST00000368662 NFKBIEO00221 500 aa14.77□□□□□ -0.05
TUBE1-202ENST00000368662 CYP7A1P22680 504 aa14.77□□□□□ -0.05
TUBE1-202ENST00000368662 USP17L1Q7RTZ2 530 aa14.77□□□□□ -0.05
TUBE1-202ENST00000368662 NIM1KQ8IY84 436 aa14.77□□□□□ -0.05
TUBE1-202ENST00000368662 FBXW7Q969H0 707 aa14.77□□□□□ -0.05
TUBE1-202ENST00000368662 MAST2Q6P0Q8 1798 aa14.77□□□□□ -0.05
TUBE1-202ENST00000368662 GPAA1O43292 621 aa14.76□□□□□ -0.05
TUBE1-202ENST00000368662 LDHCP07864 332 aa14.76□□□□□ -0.05
TUBE1-202ENST00000368662 SLFNL1Q499Z3 407 aa14.76□□□□□ -0.05
TUBE1-202ENST00000368662 JDP2Q8WYK2 163 aa14.76□□□□□ -0.05
TUBE1-202ENST00000368662 MAP4K1Q92918 833 aa14.76□□□□□ -0.05
TUBE1-202ENST00000368662 DSCC1Q9BVC3 393 aa14.76□□□□□ -0.05
TUBE1-202ENST00000368662 CCDC88AQ3V6T2 1871 aa14.76□□□□□ -0.05
TUBE1-202ENST00000368662 CHD4Q14839 1912 aa14.76□□□□□ -0.05
TUBE1-202ENST00000368662 GNAT2P19087 354 aa14.75□□□□□ -0.05
TUBE1-202ENST00000368662 CCDC129Q6ZRS4 1044 aa14.75□□□□□ -0.05
TUBE1-202ENST00000368662 CERS3Q8IU89 383 aa14.75□□□□□ -0.05
TUBE1-202ENST00000368662 ZNRF3Q9ULT6 936 aa14.75□□□□□ -0.05
TUBE1-202ENST00000368662 MYO3BQ8WXR4 1341 aa14.75□□□□□ -0.05
TUBE1-202ENST00000368662 MAGEB6P1A0A0J9YX57 407 aa14.74□□□□□ -0.05
TUBE1-202ENST00000368662 ANAPC15P60006 121 aa14.74□□□□□ -0.05
TUBE1-202ENST00000368662 PTH1RQ03431 593 aa14.74□□□□□ -0.05
TUBE1-202ENST00000368662 DACT2Q5SW24 774 aa14.74□□□□□ -0.05
TUBE1-202ENST00000368662 U3KPZ7 1027 aaPredicted RBP14.74□□□□□ -0.05
TUBE1-202ENST00000368662 HSPD1P10809 573 aaKnown RBP14.74□□□□□ -0.05
TUBE1-202ENST00000368662 HSPA4P34932 840 aa14.74□□□□□ -0.05
TUBE1-202ENST00000368662 RNF20Q5VTR2 975 aa14.74□□□□□ -0.05
TUBE1-202ENST00000368662 ZNF384Q8TF68 577 aa14.74□□□□□ -0.05
TUBE1-202ENST00000368662 NOL10Q9BSC4 688 aaKnown RBP14.74□□□□□ -0.05
TUBE1-202ENST00000368662 RPAP1Q9BWH6 1393 aaPredicted RBP14.73□□□□□ -0.05
TUBE1-202ENST00000368662 YDJCA8MPS7 323 aa14.73□□□□□ -0.05
TUBE1-202ENST00000368662 MBD4O95243 580 aa14.73□□□□□ -0.05
TUBE1-202ENST00000368662 BAG3O95817 575 aa14.73□□□□□ -0.05
TUBE1-202ENST00000368662 FAM163AQ96GL9 167 aaPredicted RBP14.73□□□□□ -0.05
TUBE1-202ENST00000368662 STRBPQ96SI9 672 aaKnown RBP14.73□□□□□ -0.05
TUBE1-202ENST00000368662 ADGRA1Q86SQ6 560 aa14.72□□□□□ -0.05
TUBE1-202ENST00000368662 CERS5Q8N5B7 392 aa14.72□□□□□ -0.05
TUBE1-202ENST00000368662 MIGA1Q8NAN2 632 aa14.72□□□□□ -0.05
TUBE1-202ENST00000368662 KCNQ5Q9NR82 932 aa14.72□□□□□ -0.05
TUBE1-202ENST00000368662 CTNNA3Q9UI47 895 aa14.72□□□□□ -0.05
TUBE1-202ENST00000368662 RBM8AQ9Y5S9 174 aaKnown RBP14.72□□□□□ -0.05
TUBE1-202ENST00000368662 MROH7-TTC4A0A0A0MT08 1334 aa14.72□□□□□ -0.05
TUBE1-202ENST00000368662 ZKSCAN1P17029 563 aaPredicted RBP14.72□□□□□ -0.05
TUBE1-202ENST00000368662 ANP32AP39687 249 aaKnown RBP14.72□□□□□ -0.05
TUBE1-202ENST00000368662 NECTIN1Q15223 517 aa14.72□□□□□ -0.05
TUBE1-202ENST00000368662 RIOK1Q9BRS2 568 aaKnown RBP14.72□□□□□ -0.05
TUBE1-202ENST00000368662 MRIQ9BWK5 157 aa14.72□□□□□ -0.05
TUBE1-202ENST00000368662 TTF2Q9UNY4 1162 aaKnown RBP14.72□□□□□ -0.05
TUBE1-202ENST00000368662 SCN9AQ15858 1988 aa14.72□□□□□ -0.05
TUBE1-202ENST00000368662 PATL2C9JE40 543 aaKnown RBP14.71□□□□□ -0.05
TUBE1-202ENST00000368662 HDLBPQ00341 1268 aaKnown RBP14.71□□□□□ -0.05
TUBE1-202ENST00000368662 GRIK5Q16478 980 aa14.71□□□□□ -0.05
TUBE1-202ENST00000368662 VPS53Q5VIR6 699 aa14.71□□□□□ -0.05
TUBE1-202ENST00000368662 ARHGAP27Q6ZUM4 889 aa14.71□□□□□ -0.05
TUBE1-202ENST00000368662 NACAP1Q9BZK3 213 aa14.71□□□□□ -0.05
TUBE1-202ENST00000368662 ARMT1Q9H993 441 aa14.71□□□□□ -0.05
TUBE1-202ENST00000368662 ZMYM6O95789 1325 aa14.71□□□□□ -0.05
TUBE1-202ENST00000368662 PSME4Q14997 1843 aa14.71□□□□□ -0.05
TUBE1-202ENST00000368662 VIL1P09327 827 aaKnown RBP14.71□□□□□ -0.06
TUBE1-202ENST00000368662 PLCG2P16885 1265 aa14.71□□□□□ -0.06
TUBE1-202ENST00000368662 PPP4CP60510 307 aa14.71□□□□□ -0.06
TUBE1-202ENST00000368662 RASSF7Q02833 373 aa14.71□□□□□ -0.06
TUBE1-202ENST00000368662 DIXDC1Q155Q3 683 aa14.71□□□□□ -0.06
TUBE1-202ENST00000368662 RSBN1LQ6PCB5 846 aaPredicted RBP14.71□□□□□ -0.06
TUBE1-202ENST00000368662 HHIPL2Q6UWX4 724 aa14.71□□□□□ -0.06
TUBE1-202ENST00000368662 LCORLQ8N3X6 602 aa14.71□□□□□ -0.06
TUBE1-202ENST00000368662 IL27Q8NEV9 243 aa14.71□□□□□ -0.06
TUBE1-202ENST00000368662 AATFQ9NY61 560 aaKnown RBP eCLIP14.71□□□□□ -0.06
TUBE1-202ENST00000368662 GAKO14976 1311 aa14.71□□□□□ -0.06
TUBE1-202ENST00000368662 COL4A5P29400 1685 aa14.7□□□□□ -0.06
TUBE1-202ENST00000368662 APPP05067 770 aa14.7□□□□□ -0.06
TUBE1-202ENST00000368662 LMNB1P20700 586 aa14.7□□□□□ -0.06
TUBE1-202ENST00000368662 TNIP1Q15025 636 aa14.7□□□□□ -0.06
TUBE1-202ENST00000368662 TEKT1Q969V4 418 aa14.7□□□□□ -0.06
TUBE1-202ENST00000368662 IL17RAQ96F46 866 aa14.7□□□□□ -0.06
TUBE1-202ENST00000368662 CRNKL1Q9BZJ0 848 aaKnown RBP14.7□□□□□ -0.06
TUBE1-202ENST00000368662 SLC4A4Q9Y6R1 1079 aa14.7□□□□□ -0.06
TUBE1-202ENST00000368662 GPR75-ASB3A0A0A6YYF3 556 aa14.69□□□□□ -0.06
TUBE1-202ENST00000368662 PSMD14O00487 310 aa14.69□□□□□ -0.06
TUBE1-202ENST00000368662 RAD17O75943 681 aa14.69□□□□□ -0.06
TUBE1-202ENST00000368662 MMP14P50281 582 aa14.69□□□□□ -0.06
TUBE1-202ENST00000368662 ALX1Q15699 326 aa14.69□□□□□ -0.06
TUBE1-202ENST00000368662 CREB3L3Q68CJ9 461 aa14.69□□□□□ -0.06
TUBE1-202ENST00000368662 CIAPIN1Q6FI81 312 aa14.69□□□□□ -0.06
TUBE1-202ENST00000368662 AGBL3Q8NEM8 1001 aa14.69□□□□□ -0.06
TUBE1-202ENST00000368662 KCNB2Q92953 911 aa14.69□□□□□ -0.06
TUBE1-202ENST00000368662 UTRNP46939 3433 aa14.69□□□□□ -0.06
TUBE1-202ENST00000368662 EIF6P56537 245 aaKnown RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms