RNA–Protein interactions for RNA: ENST00000368657.7

TUBE1-201, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-201ENST00000368657 COPS6Q7L5N1 327 aa13.66□□□□□ -0.22
TUBE1-201ENST00000368657 DIS3LQ8TF46 1054 aaKnown RBP13.66□□□□□ -0.22
TUBE1-201ENST00000368657 MYLIPQ8WY64 445 aa13.66□□□□□ -0.22
TUBE1-201ENST00000368657 CSADQ9Y600 493 aa13.66□□□□□ -0.22
TUBE1-201ENST00000368657 INHAP05111 366 aa13.65□□□□□ -0.22
TUBE1-201ENST00000368657 HSP90B1P14625 803 aaKnown RBP13.65□□□□□ -0.22
TUBE1-201ENST00000368657 SNAPC2Q13487 334 aa13.65□□□□□ -0.22
TUBE1-201ENST00000368657 RSPH6AQ9H0K4 717 aa13.65□□□□□ -0.22
TUBE1-201ENST00000368657 MED23Q9ULK4 1368 aa13.64□□□□□ -0.23
TUBE1-201ENST00000368657 EIF4G2P78344 907 aaKnown RBP eCLIP13.64□□□□□ -0.23
TUBE1-201ENST00000368657 VGLL4Q14135 290 aa13.64□□□□□ -0.23
TUBE1-201ENST00000368657 RASA3Q14644 834 aa13.64□□□□□ -0.23
TUBE1-201ENST00000368657 ATXN2LQ8WWM7 1075 aaKnown RBP13.64□□□□□ -0.23
TUBE1-201ENST00000368657 C11orf49Q9H6J7 331 aa13.64□□□□□ -0.23
TUBE1-201ENST00000368657 SEC31BQ9NQW1 1179 aa13.64□□□□□ -0.23
TUBE1-201ENST00000368657 SPDYE5A6NIY4 337 aa13.63□□□□□ -0.23
TUBE1-201ENST00000368657 IRS4O14654 1257 aaPredicted RBP13.63□□□□□ -0.23
TUBE1-201ENST00000368657 AIMP1Q12904 312 aaKnown RBP13.63□□□□□ -0.23
TUBE1-201ENST00000368657 IRF5Q13568 498 aa13.63□□□□□ -0.23
TUBE1-201ENST00000368657 ERO1BQ86YB8 467 aa13.63□□□□□ -0.23
TUBE1-201ENST00000368657 GABRQQ9UN88 632 aa13.63□□□□□ -0.23
TUBE1-201ENST00000368657 MDM2Q00987 491 aaPredicted RBP13.62□□□□□ -0.23
TUBE1-201ENST00000368657 TNFAIP1Q13829 316 aa13.62□□□□□ -0.23
TUBE1-201ENST00000368657 ANKRD23Q86SG2 305 aa13.62□□□□□ -0.23
TUBE1-201ENST00000368657 VEZTQ9HBM0 779 aa13.62□□□□□ -0.23
TUBE1-201ENST00000368657 COL4A1P02462 1669 aa13.61□□□□□ -0.23
TUBE1-201ENST00000368657 CLRN2A0PK11 232 aa13.61□□□□□ -0.23
TUBE1-201ENST00000368657 EIF2S2P20042 333 aaKnown RBP13.61□□□□□ -0.23
TUBE1-201ENST00000368657 FLT3LGP49771 235 aa13.61□□□□□ -0.23
TUBE1-201ENST00000368657 ALYREFQ86V81 257 aaKnown RBP13.61□□□□□ -0.23
TUBE1-201ENST00000368657 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.61□□□□□ -0.23
TUBE1-201ENST00000368657 XAGE3Q8WTP9 111 aa13.61□□□□□ -0.23
TUBE1-201ENST00000368657 PRMT6Q96LA8 375 aaPredicted RBP13.61□□□□□ -0.23
TUBE1-201ENST00000368657 LBHD1Q9BQE6 289 aaPredicted RBP13.61□□□□□ -0.23
TUBE1-201ENST00000368657 ELNP15502 786 aa13.6□□□□□ -0.23
TUBE1-201ENST00000368657 GTF2IP78347 998 aa13.6□□□□□ -0.23
TUBE1-201ENST00000368657 PROSER3Q2NL68 480 aa13.6□□□□□ -0.23
TUBE1-201ENST00000368657 CCDC152Q4G0S7 254 aa13.6□□□□□ -0.23
TUBE1-201ENST00000368657 ANKRD18AQ8IVF6 992 aa13.6□□□□□ -0.23
TUBE1-201ENST00000368657 ISCA1Q9BUE6 129 aa13.6□□□□□ -0.23
TUBE1-201ENST00000368657 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.6□□□□□ -0.23
TUBE1-201ENST00000368657 PIEZO1Q92508 2521 aa13.6□□□□□ -0.23
TUBE1-201ENST00000368657 PDHXO00330 501 aa13.59□□□□□ -0.23
TUBE1-201ENST00000368657 IRF6O14896 467 aa13.59□□□□□ -0.23
TUBE1-201ENST00000368657 CD44P16070 742 aaKnown RBP13.59□□□□□ -0.23
TUBE1-201ENST00000368657 PPIL2Q13356 520 aa13.59□□□□□ -0.23
TUBE1-201ENST00000368657 CFAP100Q494V2 611 aa13.59□□□□□ -0.23
TUBE1-201ENST00000368657 ADAMTS19Q8TE59 1207 aa13.59□□□□□ -0.23
TUBE1-201ENST00000368657 ZNF428Q96B54 188 aa13.59□□□□□ -0.23
TUBE1-201ENST00000368657 ASB2Q96Q27 587 aa13.59□□□□□ -0.23
TUBE1-201ENST00000368657 UHRF1Q96T88 793 aaPredicted RBP13.59□□□□□ -0.23
TUBE1-201ENST00000368657 COL3A1P02461 1466 aaPredicted RBP13.59□□□□□ -0.23
TUBE1-201ENST00000368657 ANXA1P04083 346 aa13.58□□□□□ -0.24
TUBE1-201ENST00000368657 BCRP11274 1271 aa13.58□□□□□ -0.24
TUBE1-201ENST00000368657 CCT4P50991 539 aaKnown RBP13.58□□□□□ -0.24
TUBE1-201ENST00000368657 SMAD3P84022 425 aaKnown RBP13.58□□□□□ -0.24
TUBE1-201ENST00000368657 TRIM28Q13263 835 aaKnown RBP13.58□□□□□ -0.24
TUBE1-201ENST00000368657 RTL5Q5HYW3 569 aaPredicted RBP13.58□□□□□ -0.24
TUBE1-201ENST00000368657 P2RX7Q99572 595 aaKnown RBP13.58□□□□□ -0.24
TUBE1-201ENST00000368657 TTYH1Q9H313 450 aaPredicted RBP13.58□□□□□ -0.24
TUBE1-201ENST00000368657 NUDCQ9Y266 331 aa13.58□□□□□ -0.24
TUBE1-201ENST00000368657 OTOFQ9HC10 1997 aa13.58□□□□□ -0.24
TUBE1-201ENST00000368657 ECM29Q5VYK3 1845 aa13.57□□□□□ -0.24
TUBE1-201ENST00000368657 PLBD2Q8NHP8 589 aa13.57□□□□□ -0.24
TUBE1-201ENST00000368657 LEMD3Q9Y2U8 911 aa13.57□□□□□ -0.24
TUBE1-201ENST00000368657 MRPS5P82675 430 aaKnown RBP13.56□□□□□ -0.24
TUBE1-201ENST00000368657 PPATQ06203 517 aa13.56□□□□□ -0.24
TUBE1-201ENST00000368657 TEPSINQ96N21 525 aa13.56□□□□□ -0.24
TUBE1-201ENST00000368657 LRFN3Q9BTN0 628 aa13.56□□□□□ -0.24
TUBE1-201ENST00000368657 HMX1Q9NP08 348 aaPredicted RBP13.56□□□□□ -0.24
TUBE1-201ENST00000368657 OGDHLQ9ULD0 1010 aa13.56□□□□□ -0.24
TUBE1-201ENST00000368657 MINPP1Q9UNW1 487 aa13.56□□□□□ -0.24
TUBE1-201ENST00000368657 PCDHAC2Q9Y5I4 1007 aa13.56□□□□□ -0.24
TUBE1-201ENST00000368657 SNCAIPQ9Y6H5 919 aa13.56□□□□□ -0.24
TUBE1-201ENST00000368657 ATP5J2-PTCD1G3V325 749 aa13.55□□□□□ -0.24
TUBE1-201ENST00000368657 TNNI2P48788 182 aa13.55□□□□□ -0.24
TUBE1-201ENST00000368657 RBM5P52756 815 aaKnown RBP eCLIP13.55□□□□□ -0.24
TUBE1-201ENST00000368657 TXNRD3Q86VQ6 643 aa13.55□□□□□ -0.24
TUBE1-201ENST00000368657 ZBTB38Q8NAP3 1195 aaPredicted RBP13.55□□□□□ -0.24
TUBE1-201ENST00000368657 IL27Q8NEV9 243 aa13.55□□□□□ -0.24
TUBE1-201ENST00000368657 CDC5LQ99459 802 aaKnown RBP13.55□□□□□ -0.24
TUBE1-201ENST00000368657 PARK7Q99497 189 aaKnown RBP13.55□□□□□ -0.24
TUBE1-201ENST00000368657 BSDC1Q9NW68 430 aaPredicted RBP13.55□□□□□ -0.24
TUBE1-201ENST00000368657 NCOR1O75376 2440 aa13.55□□□□□ -0.24
TUBE1-201ENST00000368657 BDP1A6H8Y1 2624 aa13.55□□□□□ -0.24
TUBE1-201ENST00000368657 MGAMO43451 1857 aa13.55□□□□□ -0.24
TUBE1-201ENST00000368657 TNPO2O14787 897 aaKnown RBP13.54□□□□□ -0.24
TUBE1-201ENST00000368657 PDE8AO60658 829 aa13.54□□□□□ -0.24
TUBE1-201ENST00000368657 USP38Q8NB14 1042 aa13.54□□□□□ -0.24
TUBE1-201ENST00000368657 CFAP53Q96M91 514 aa13.54□□□□□ -0.24
TUBE1-201ENST00000368657 U2AF1L5P0DN76 240 aaPredicted RBP13.53□□□□□ -0.24
TUBE1-201ENST00000368657 FKBP1AP62942 108 aaKnown RBP13.53□□□□□ -0.24
TUBE1-201ENST00000368657 U2AF1Q01081 240 aaKnown RBP eCLIP13.53□□□□□ -0.24
TUBE1-201ENST00000368657 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.53□□□□□ -0.24
TUBE1-201ENST00000368657 COA7Q96BR5 231 aa13.53□□□□□ -0.24
TUBE1-201ENST00000368657 PCGF6Q9BYE7 350 aa13.53□□□□□ -0.24
TUBE1-201ENST00000368657 THEGQ9P2T0 379 aa13.53□□□□□ -0.24
TUBE1-201ENST00000368657 ZNF70Q9UC06 446 aaPredicted RBP13.53□□□□□ -0.24
TUBE1-201ENST00000368657 PFASO15067 1338 aa13.53□□□□□ -0.24
TUBE1-201ENST00000368657 CDH23Q9H251 3354 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms