RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 MMP14P50281 582 aa18.5■□□□□ 0.55
SMPDL3A-201ENST00000368440 AAMPQ13685 434 aa18.5■□□□□ 0.55
SMPDL3A-201ENST00000368440 DLGAP5Q15398 846 aa18.5■□□□□ 0.55
SMPDL3A-201ENST00000368440 SPATA5Q8NB90 893 aa18.5■□□□□ 0.55
SMPDL3A-201ENST00000368440 SNRKQ9NRH2 765 aa18.5■□□□□ 0.55
SMPDL3A-201ENST00000368440 HSPA6P17066 643 aa18.49■□□□□ 0.55
SMPDL3A-201ENST00000368440 CRKP46108 304 aa18.49■□□□□ 0.55
SMPDL3A-201ENST00000368440 RBM5P52756 815 aaKnown RBP eCLIP18.49■□□□□ 0.55
SMPDL3A-201ENST00000368440 MTMR14Q8NCE2 650 aa18.49■□□□□ 0.55
SMPDL3A-201ENST00000368440 PRMT6Q96LA8 375 aaPredicted RBP18.49■□□□□ 0.55
SMPDL3A-201ENST00000368440 SPDYE2BA6NHP3 402 aa18.48■□□□□ 0.55
SMPDL3A-201ENST00000368440 ADM5C9JUS6 153 aa18.48■□□□□ 0.55
SMPDL3A-201ENST00000368440 SPDYE6P0CI01 402 aa18.48■□□□□ 0.55
SMPDL3A-201ENST00000368440 TBC1D9Q6ZT07 1266 aa18.48■□□□□ 0.55
SMPDL3A-201ENST00000368440 USP48Q86UV5 1035 aa18.48■□□□□ 0.55
SMPDL3A-201ENST00000368440 SERPINA10Q9UK55 444 aa18.48■□□□□ 0.55
SMPDL3A-201ENST00000368440 SUGT1Q9Y2Z0 365 aa18.48■□□□□ 0.55
SMPDL3A-201ENST00000368440 MYH2Q9UKX2 1941 aa18.48■□□□□ 0.55
SMPDL3A-201ENST00000368440 IFIT2P09913 472 aaKnown RBP18.48■□□□□ 0.55
SMPDL3A-201ENST00000368440 HDAC1Q13547 482 aaPredicted RBP18.48■□□□□ 0.55
SMPDL3A-201ENST00000368440 DCPSQ96C86 337 aaKnown RBP18.48■□□□□ 0.55
SMPDL3A-201ENST00000368440 ZNF512BQ96KM6 892 aaPredicted RBP18.48■□□□□ 0.55
SMPDL3A-201ENST00000368440 ABCF2Q9UG63 623 aa18.48■□□□□ 0.55
SMPDL3A-201ENST00000368440 MAST2Q6P0Q8 1798 aa18.47■□□□□ 0.55
SMPDL3A-201ENST00000368440 LDHBP07195 334 aaKnown RBP18.47■□□□□ 0.55
SMPDL3A-201ENST00000368440 HTRA3P83110 453 aa18.47■□□□□ 0.55
SMPDL3A-201ENST00000368440 DIXDC1Q155Q3 683 aa18.47■□□□□ 0.55
SMPDL3A-201ENST00000368440 KRT26Q7Z3Y9 468 aa18.47■□□□□ 0.55
SMPDL3A-201ENST00000368440 NDUFB9Q9Y6M9 179 aa18.47■□□□□ 0.55
SMPDL3A-201ENST00000368440 DOCK2Q92608 1830 aa18.47■□□□□ 0.55
SMPDL3A-201ENST00000368440 ZAP70P43403 619 aa18.46■□□□□ 0.55
SMPDL3A-201ENST00000368440 APLP1P51693 650 aa18.46■□□□□ 0.55
SMPDL3A-201ENST00000368440 CDC37L1Q7L3B6 337 aa18.46■□□□□ 0.55
SMPDL3A-201ENST00000368440 PITPNM2Q9BZ72 1349 aa18.46■□□□□ 0.55
SMPDL3A-201ENST00000368440 CLRN2A0PK11 232 aa18.46■□□□□ 0.54
SMPDL3A-201ENST00000368440 HDLBPQ00341 1268 aaKnown RBP18.46■□□□□ 0.54
SMPDL3A-201ENST00000368440 TEKT1Q969V4 418 aa18.46■□□□□ 0.54
SMPDL3A-201ENST00000368440 MAST3O60307 1309 aa18.45■□□□□ 0.54
SMPDL3A-201ENST00000368440 IGHDP01880 384 aa18.45■□□□□ 0.54
SMPDL3A-201ENST00000368440 CYP2E1P05181 493 aaPredicted RBP18.45■□□□□ 0.54
SMPDL3A-201ENST00000368440 ZGPATQ8N5A5 531 aaKnown RBP18.45■□□□□ 0.54
SMPDL3A-201ENST00000368440 ZNF384Q8TF68 577 aa18.45■□□□□ 0.54
SMPDL3A-201ENST00000368440 TDRD3Q9H7E2 651 aaKnown RBP18.45■□□□□ 0.54
SMPDL3A-201ENST00000368440 SULF1Q8IWU6 871 aa18.44■□□□□ 0.54
SMPDL3A-201ENST00000368440 ZDHHC15Q96MV8 337 aa18.43■□□□□ 0.54
SMPDL3A-201ENST00000368440 DAGLAQ9Y4D2 1042 aa18.43■□□□□ 0.54
SMPDL3A-201ENST00000368440 MECOMQ03112 1051 aa18.43■□□□□ 0.54
SMPDL3A-201ENST00000368440 APOBEC3HQ6NTF7 200 aaKnown RBP18.43■□□□□ 0.54
SMPDL3A-201ENST00000368440 HHIPL2Q6UWX4 724 aa18.43■□□□□ 0.54
SMPDL3A-201ENST00000368440 ERICH6Q7L0X2 663 aa18.43■□□□□ 0.54
SMPDL3A-201ENST00000368440 DZIP1Q86YF9 867 aaKnown RBP18.43■□□□□ 0.54
SMPDL3A-201ENST00000368440 MRIQ9BWK5 157 aa18.43■□□□□ 0.54
SMPDL3A-201ENST00000368440 PIH1D3Q9NQM4 214 aaKnown RBP18.43■□□□□ 0.54
SMPDL3A-201ENST00000368440 SPDYE2Q495Y8 402 aa18.42■□□□□ 0.54
SMPDL3A-201ENST00000368440 PRAMEF18Q5VWM3 479 aa18.42■□□□□ 0.54
SMPDL3A-201ENST00000368440 CST9Q5W186 159 aa18.42■□□□□ 0.54
SMPDL3A-201ENST00000368440 SPTY2D1Q68D10 685 aaPredicted RBP18.42■□□□□ 0.54
SMPDL3A-201ENST00000368440 ANTXR1Q9H6X2 564 aa18.42■□□□□ 0.54
SMPDL3A-201ENST00000368440 VEZTQ9HBM0 779 aa18.42■□□□□ 0.54
SMPDL3A-201ENST00000368440 ZNF70Q9UC06 446 aaPredicted RBP18.42■□□□□ 0.54
SMPDL3A-201ENST00000368440 MYO1BO43795 1136 aa18.41■□□□□ 0.54
SMPDL3A-201ENST00000368440 OTUD7AQ8TE49 926 aaPredicted RBP18.41■□□□□ 0.54
SMPDL3A-201ENST00000368440 GCC1Q96CN9 775 aa18.41■□□□□ 0.54
SMPDL3A-201ENST00000368440 CDCA5Q96FF9 252 aa18.41■□□□□ 0.54
SMPDL3A-201ENST00000368440 RWDD1Q9H446 243 aaPredicted RBP18.41■□□□□ 0.54
SMPDL3A-201ENST00000368440 ZNF408Q9H9D4 720 aa18.41■□□□□ 0.54
SMPDL3A-201ENST00000368440 RAI14Q9P0K7 980 aa18.41■□□□□ 0.54
SMPDL3A-201ENST00000368440 CELF2O95319 508 aaKnown RBP18.41■□□□□ 0.54
SMPDL3A-201ENST00000368440 CACNB3P54284 484 aa18.41■□□□□ 0.54
SMPDL3A-201ENST00000368440 TSHZ3Q63HK5 1081 aa18.41■□□□□ 0.54
SMPDL3A-201ENST00000368440 APOBEC3FQ8IUX4 373 aaKnown RBP18.41■□□□□ 0.54
SMPDL3A-201ENST00000368440 NSUN4Q96CB9 384 aaKnown RBP18.41■□□□□ 0.54
SMPDL3A-201ENST00000368440 LRP2BPQ9P2M1 347 aa18.41■□□□□ 0.54
SMPDL3A-201ENST00000368440 CEP350Q5VT06 3117 aa18.4■□□□□ 0.54
SMPDL3A-201ENST00000368440 TMEM88BA6NKF7 163 aa18.4■□□□□ 0.54
SMPDL3A-201ENST00000368440 ANKRD45Q5TZF3 282 aa18.4■□□□□ 0.54
SMPDL3A-201ENST00000368440 SMC5Q8IY18 1101 aa18.4■□□□□ 0.54
SMPDL3A-201ENST00000368440 GAKO14976 1311 aa18.4■□□□□ 0.54
SMPDL3A-201ENST00000368440 ATP5JP18859 108 aa18.39■□□□□ 0.54
SMPDL3A-201ENST00000368440 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.39■□□□□ 0.54
SMPDL3A-201ENST00000368440 EDC3Q96F86 508 aaKnown RBP18.39■□□□□ 0.54
SMPDL3A-201ENST00000368440 DNAJC2Q99543 621 aaKnown RBP18.39■□□□□ 0.54
SMPDL3A-201ENST00000368440 BOLA2Q9H3K6 86 aa18.39■□□□□ 0.54
SMPDL3A-201ENST00000368440 CREBZFQ9NS37 354 aa18.39■□□□□ 0.54
SMPDL3A-201ENST00000368440 MROH7-TTC4A0A0A0MT08 1334 aa18.39■□□□□ 0.53
SMPDL3A-201ENST00000368440 TCP10L2B9ZVM9 353 aa18.38■□□□□ 0.53
SMPDL3A-201ENST00000368440 B4GALNT3Q6L9W6 998 aa18.38■□□□□ 0.53
SMPDL3A-201ENST00000368440 DEFB129Q9H1M3 183 aa18.38■□□□□ 0.53
SMPDL3A-201ENST00000368440 SSC5DA1L4H1 1573 aa18.37■□□□□ 0.53
SMPDL3A-201ENST00000368440 GOLIM4O00461 696 aa18.37■□□□□ 0.53
SMPDL3A-201ENST00000368440 CDC42EP5Q6NZY7 148 aa18.37■□□□□ 0.53
SMPDL3A-201ENST00000368440 ECHDC1Q9NTX5 307 aa18.37■□□□□ 0.53
SMPDL3A-201ENST00000368440 CNTNAP1P78357 1384 aa18.37■□□□□ 0.53
SMPDL3A-201ENST00000368440 SALL3Q9BXA9 1300 aa18.37■□□□□ 0.53
SMPDL3A-201ENST00000368440 MYH7P12883 1935 aa18.37■□□□□ 0.53
SMPDL3A-201ENST00000368440 IDH1O75874 414 aaKnown RBP18.37■□□□□ 0.53
SMPDL3A-201ENST00000368440 RASA3Q14644 834 aa18.37■□□□□ 0.53
SMPDL3A-201ENST00000368440 ADGRA1Q86SQ6 560 aa18.37■□□□□ 0.53
SMPDL3A-201ENST00000368440 FAM163AQ96GL9 167 aaPredicted RBP18.37■□□□□ 0.53
SMPDL3A-201ENST00000368440 CDK5RAP2Q96SN8 1893 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms